RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 MTHFSDQ2M296 383 aaKnown RBP15.99■□□□□ 0.15
CDH8-202ENST00000577228 RNF181Q9P0P0 153 aa15.99■□□□□ 0.15
CDH8-202ENST00000577228 NARFQ9UHQ1 456 aa15.99■□□□□ 0.15
CDH8-202ENST00000577228 NFIXQ14938 502 aa15.98■□□□□ 0.15
CDH8-202ENST00000577228 CC2D1BQ5T0F9 858 aaKnown RBP15.98■□□□□ 0.15
CDH8-202ENST00000577228 C16orf71Q8IYS4 520 aaPredicted RBP15.98■□□□□ 0.15
CDH8-202ENST00000577228 ZBTB1Q9Y2K1 713 aa15.98■□□□□ 0.15
CDH8-202ENST00000577228 KDM2BQ8NHM5 1336 aa15.97■□□□□ 0.15
CDH8-202ENST00000577228 VSIG10Q8N0Z9 540 aa15.97■□□□□ 0.15
CDH8-202ENST00000577228 RBM46Q8TBY0 533 aaKnown RBP15.97■□□□□ 0.15
CDH8-202ENST00000577228 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.15
CDH8-202ENST00000577228 PER1O15534 1290 aaPredicted RBP15.95■□□□□ 0.14
CDH8-202ENST00000577228 TTC5Q8N0Z6 440 aa15.95■□□□□ 0.14
CDH8-202ENST00000577228 STARD3NLO95772 234 aa15.94■□□□□ 0.14
CDH8-202ENST00000577228 SERPINB2P05120 415 aa15.94■□□□□ 0.14
CDH8-202ENST00000577228 CANXP27824 592 aaKnown RBP15.94■□□□□ 0.14
CDH8-202ENST00000577228 BCL2L12Q9HB09 334 aa15.94■□□□□ 0.14
CDH8-202ENST00000577228 UBR2Q8IWV8 1755 aa15.94■□□□□ 0.14
CDH8-202ENST00000577228 AFDNP55196 1824 aaKnown RBP15.94■□□□□ 0.14
CDH8-202ENST00000577228 NRXN2Q9P2S2 1712 aa15.94■□□□□ 0.14
CDH8-202ENST00000577228 COL3A1P02461 1466 aaPredicted RBP15.93■□□□□ 0.14
CDH8-202ENST00000577228 U2SURPO15042 1029 aaKnown RBP15.93■□□□□ 0.14
CDH8-202ENST00000577228 RASSF7Q02833 373 aa15.93■□□□□ 0.14
CDH8-202ENST00000577228 A0A087WZG4 1122 aa15.92■□□□□ 0.14
CDH8-202ENST00000577228 TEFQ10587 303 aa15.92■□□□□ 0.14
CDH8-202ENST00000577228 FSTL1Q12841 308 aa15.92■□□□□ 0.14
CDH8-202ENST00000577228 C2CD5Q86YS7 1000 aa15.92■□□□□ 0.14
CDH8-202ENST00000577228 DNAJC5GQ8N7S2 189 aa15.92■□□□□ 0.14
CDH8-202ENST00000577228 GAS2L2Q8NHY3 880 aa15.92■□□□□ 0.14
CDH8-202ENST00000577228 RRAGCQ9HB90 399 aa15.92■□□□□ 0.14
CDH8-202ENST00000577228 ZC3H4Q9UPT8 1303 aaKnown RBP15.92■□□□□ 0.14
CDH8-202ENST00000577228 SBF1O95248 1867 aa15.91■□□□□ 0.14
CDH8-202ENST00000577228 CARMIL3Q8ND23 1372 aa15.91■□□□□ 0.14
CDH8-202ENST00000577228 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
CDH8-202ENST00000577228 DLEC1Q9Y238 1755 aa15.91■□□□□ 0.14
CDH8-202ENST00000577228 GNAT3A8MTJ3 354 aa15.91■□□□□ 0.14
CDH8-202ENST00000577228 EIF5P55010 431 aaKnown RBP15.91■□□□□ 0.14
CDH8-202ENST00000577228 CNGB1Q14028 1251 aaPredicted RBP15.91■□□□□ 0.14
CDH8-202ENST00000577228 BICDL1Q6ZP65 573 aa15.91■□□□□ 0.14
CDH8-202ENST00000577228 TTLL6Q8N841 843 aa15.91■□□□□ 0.14
CDH8-202ENST00000577228 ZNF496Q96IT1 587 aaPredicted RBP15.91■□□□□ 0.14
CDH8-202ENST00000577228 TNRC6CQ9HCJ0 1690 aaKnown RBP15.91■□□□□ 0.14
CDH8-202ENST00000577228 WDR90Q96KV7 1748 aa15.91■□□□□ 0.14
CDH8-202ENST00000577228 HEG1Q9ULI3 1381 aa15.9■□□□□ 0.14
CDH8-202ENST00000577228 H0YIN7 160 aa15.9■□□□□ 0.14
CDH8-202ENST00000577228 LMNB1P20700 586 aa15.9■□□□□ 0.14
CDH8-202ENST00000577228 ZNF790Q6PG37 636 aa15.9■□□□□ 0.14
CDH8-202ENST00000577228 IL17REQ8NFR9 667 aa15.9■□□□□ 0.14
CDH8-202ENST00000577228 TEX13AQ9BXU3 409 aaPredicted RBP15.89■□□□□ 0.13
CDH8-202ENST00000577228 ZNF330Q9Y3S2 320 aaPredicted RBP15.89■□□□□ 0.13
CDH8-202ENST00000577228 TBC1D9BQ66K14 1250 aa15.88■□□□□ 0.13
CDH8-202ENST00000577228 SCN7AQ01118 1682 aa15.88■□□□□ 0.13
CDH8-202ENST00000577228 PRELPP51888 382 aa15.87■□□□□ 0.13
CDH8-202ENST00000577228 HTRA3P83110 453 aa15.87■□□□□ 0.13
CDH8-202ENST00000577228 SMC1BQ8NDV3 1235 aa15.87■□□□□ 0.13
CDH8-202ENST00000577228 FMNL2Q96PY5 1086 aa15.87■□□□□ 0.13
CDH8-202ENST00000577228 SIPA1L3O60292 1781 aaPredicted RBP15.86■□□□□ 0.13
CDH8-202ENST00000577228 GLTPD2A6NH11 291 aa15.86■□□□□ 0.13
CDH8-202ENST00000577228 NFKBIEO00221 500 aa15.86■□□□□ 0.13
CDH8-202ENST00000577228 IL6STP40189 918 aaPredicted RBP15.86■□□□□ 0.13
CDH8-202ENST00000577228 NPM2Q86SE8 214 aaKnown RBP15.86■□□□□ 0.13
CDH8-202ENST00000577228 ZNF622Q969S3 477 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDH8-202ENST00000577228 KLRG1Q96E93 195 aa15.86■□□□□ 0.13
CDH8-202ENST00000577228 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
CDH8-202ENST00000577228 TBC1D2BQ9UPU7 963 aa15.86■□□□□ 0.13
CDH8-202ENST00000577228 PDE6BP35913 854 aa15.85■□□□□ 0.13
CDH8-202ENST00000577228 PRR5LQ6MZQ0 368 aa15.85■□□□□ 0.13
CDH8-202ENST00000577228 CFAP53Q96M91 514 aa15.85■□□□□ 0.13
CDH8-202ENST00000577228 BRIP1Q9BX63 1249 aa15.85■□□□□ 0.13
CDH8-202ENST00000577228 CEMIPQ8WUJ3 1361 aa15.85■□□□□ 0.13
CDH8-202ENST00000577228 TIAM2Q8IVF5 1701 aa15.85■□□□□ 0.13
CDH8-202ENST00000577228 A1BGP04217 495 aa15.84■□□□□ 0.13
CDH8-202ENST00000577228 VEGFAP15692 232 aaPredicted RBP15.84■□□□□ 0.13
CDH8-202ENST00000577228 PRKAR2BP31323 418 aa15.84■□□□□ 0.13
CDH8-202ENST00000577228 ANKRD31Q8N7Z5 1873 aa15.84■□□□□ 0.13
CDH8-202ENST00000577228 BTBD11A6QL63 1104 aa15.83■□□□□ 0.12
CDH8-202ENST00000577228 NPHP1O15259 732 aa15.83■□□□□ 0.12
CDH8-202ENST00000577228 CAMTA2O94983 1202 aa15.83■□□□□ 0.12
CDH8-202ENST00000577228 CCDC24Q8N4L8 307 aa15.83■□□□□ 0.12
CDH8-202ENST00000577228 PHACTR3Q96KR7 559 aa15.83■□□□□ 0.12
CDH8-202ENST00000577228 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
CDH8-202ENST00000577228 KCNQ3O43525 872 aa15.82■□□□□ 0.12
CDH8-202ENST00000577228 C21orf2O43822 256 aa15.82■□□□□ 0.12
CDH8-202ENST00000577228 JMYQ8N9B5 988 aa15.82■□□□□ 0.12
CDH8-202ENST00000577228 CNBD1Q8NA66 436 aa15.82■□□□□ 0.12
CDH8-202ENST00000577228 SETDB2Q96T68 719 aa15.82■□□□□ 0.12
CDH8-202ENST00000577228 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
CDH8-202ENST00000577228 COL11A2P13942 1736 aaPredicted RBP15.82■□□□□ 0.12
CDH8-202ENST00000577228 ST5P78524 1137 aa15.81■□□□□ 0.12
CDH8-202ENST00000577228 DZIP3Q86Y13 1208 aaKnown RBP15.81■□□□□ 0.12
CDH8-202ENST00000577228 NUDCQ9Y266 331 aa15.81■□□□□ 0.12
CDH8-202ENST00000577228 CCDC88AQ3V6T2 1871 aa15.8■□□□□ 0.12
CDH8-202ENST00000577228 DPY19L2Q6NUT2 758 aa15.8■□□□□ 0.12
CDH8-202ENST00000577228 U2AF1L5P0DN76 240 aaPredicted RBP15.79■□□□□ 0.12
CDH8-202ENST00000577228 U2AF1Q01081 240 aaKnown RBP eCLIP15.79■□□□□ 0.12
CDH8-202ENST00000577228 ERFEQ4G0M1 354 aa15.79■□□□□ 0.12
CDH8-202ENST00000577228 STYK1Q6J9G0 422 aa15.79■□□□□ 0.12
CDH8-202ENST00000577228 RTF1Q92541 710 aaKnown RBP15.79■□□□□ 0.12
CDH8-202ENST00000577228 CNKSR1Q969H4 720 aa15.79■□□□□ 0.12
CDH8-202ENST00000577228 TAOK3Q9H2K8 898 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms