RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	KDM4A	O75164	1064 aa		17.95	■□□□□ 0.46
PRPF8-216	ENST00000577001	ADCK5	Q3MIX3	580 aa		17.95	■□□□□ 0.46
PRPF8-216	ENST00000577001	SLFNL1	Q499Z3	407 aa		17.95	■□□□□ 0.46
PRPF8-216	ENST00000577001	ZNF530	Q6P9A1	599 aa	Predicted RBP	17.95	■□□□□ 0.46
PRPF8-216	ENST00000577001	RHPN1	Q8TCX5	695 aa		17.95	■□□□□ 0.46
PRPF8-216	ENST00000577001	USP25	Q9UHP3	1055 aa		17.95	■□□□□ 0.46
PRPF8-216	ENST00000577001	ZNF330	Q9Y3S2	320 aa	Predicted RBP	17.95	■□□□□ 0.46
PRPF8-216	ENST00000577001	PSME1	Q06323	249 aa		17.94	■□□□□ 0.46
PRPF8-216	ENST00000577001	CAMK4	Q16566	473 aa		17.94	■□□□□ 0.46
PRPF8-216	ENST00000577001	BOLA2	Q9H3K6	86 aa		17.94	■□□□□ 0.46
PRPF8-216	ENST00000577001	PTH1R	Q03431	593 aa		17.94	■□□□□ 0.46
PRPF8-216	ENST00000577001	SPC24	Q8NBT2	197 aa		17.94	■□□□□ 0.46
PRPF8-216	ENST00000577001	GNAI3	P08754	354 aa		17.94	■□□□□ 0.46
PRPF8-216	ENST00000577001	CEBPZ	Q03701	1054 aa	Known RBP	17.94	■□□□□ 0.46
PRPF8-216	ENST00000577001	NCBP3	Q53F19	620 aa	Known RBP	17.94	■□□□□ 0.46
PRPF8-216	ENST00000577001	CLTC	Q00610	1675 aa	Known RBP	17.93	■□□□□ 0.46
PRPF8-216	ENST00000577001	TNR	Q92752	1358 aa		17.93	■□□□□ 0.46
PRPF8-216	ENST00000577001	GIMAP6	Q6P9H5	292 aa		17.93	■□□□□ 0.46
PRPF8-216	ENST00000577001	LRRC2	Q9BYS8	371 aa		17.93	■□□□□ 0.46
PRPF8-216	ENST00000577001	HCLS1	P14317	486 aa	Predicted RBP	17.92	■□□□□ 0.46
PRPF8-216	ENST00000577001	AK2	P54819	239 aa		17.92	■□□□□ 0.46
PRPF8-216	ENST00000577001	JAKMIP1	Q96N16	626 aa	Known RBP	17.92	■□□□□ 0.46
PRPF8-216	ENST00000577001	TAF6L	Q9Y6J9	622 aa		17.92	■□□□□ 0.46
PRPF8-216	ENST00000577001	BTBD11	A6QL63	1104 aa		17.92	■□□□□ 0.46
PRPF8-216	ENST00000577001	CCDC173	Q0VFZ6	552 aa		17.92	■□□□□ 0.46
PRPF8-216	ENST00000577001	TTC12	Q9H892	705 aa	Predicted RBP	17.92	■□□□□ 0.46
PRPF8-216	ENST00000577001	TFIP11	Q9UBB9	837 aa	Known RBP	17.92	■□□□□ 0.46
PRPF8-216	ENST00000577001	FAM227B	Q96M60	508 aa		17.91	■□□□□ 0.46
PRPF8-216	ENST00000577001	DIAPH3	Q9NSV4	1193 aa		17.91	■□□□□ 0.46
PRPF8-216	ENST00000577001	CRB1	P82279	1406 aa		17.91	■□□□□ 0.46
PRPF8-216	ENST00000577001	RERE	Q9P2R6	1566 aa		17.91	■□□□□ 0.46
PRPF8-216	ENST00000577001	ZSCAN30	Q86W11	494 aa		17.91	■□□□□ 0.46
PRPF8-216	ENST00000577001	TLR7	Q9NYK1	1049 aa	Known RBP	17.91	■□□□□ 0.46
PRPF8-216	ENST00000577001	MAP3K2	Q9Y2U5	619 aa		17.91	■□□□□ 0.46
PRPF8-216	ENST00000577001	AACS	Q86V21	672 aa		17.9	■□□□□ 0.46
PRPF8-216	ENST00000577001	ORAI2	Q96SN7	254 aa		17.9	■□□□□ 0.46
PRPF8-216	ENST00000577001	CDK12	Q9NYV4	1490 aa	Predicted RBP	17.9	■□□□□ 0.46
PRPF8-216	ENST00000577001	DLG5	Q8TDM6	1919 aa		17.9	■□□□□ 0.46
PRPF8-216	ENST00000577001	AGL	P35573	1532 aa		17.9	■□□□□ 0.46
PRPF8-216	ENST00000577001	CCDC85A	Q96PX6	553 aa	Predicted RBP	17.9	■□□□□ 0.46
PRPF8-216	ENST00000577001	USP32	Q8NFA0	1604 aa		17.9	■□□□□ 0.46
PRPF8-216	ENST00000577001	ATP7B	P35670	1465 aa		17.9	■□□□□ 0.46
PRPF8-216	ENST00000577001		A0A087WWV3	80 aa		17.9	■□□□□ 0.46
PRPF8-216	ENST00000577001	CYP2E1	P05181	493 aa	Predicted RBP	17.89	■□□□□ 0.45
PRPF8-216	ENST00000577001	HAP1	P54257	671 aa	Predicted RBP	17.89	■□□□□ 0.45
PRPF8-216	ENST00000577001	CABLES1	Q8TDN4	633 aa		17.89	■□□□□ 0.45
PRPF8-216	ENST00000577001	DDX11	Q96FC9	970 aa		17.89	■□□□□ 0.45
PRPF8-216	ENST00000577001	DNM1	Q05193	864 aa	Known RBP	17.89	■□□□□ 0.45
PRPF8-216	ENST00000577001	AATK	Q6ZMQ8	1374 aa		17.88	■□□□□ 0.45
PRPF8-216	ENST00000577001	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	17.88	■□□□□ 0.45
PRPF8-216	ENST00000577001	SNX14	Q9Y5W7	946 aa		17.88	■□□□□ 0.45
PRPF8-216	ENST00000577001	TMEM2	Q9UHN6	1383 aa		17.88	■□□□□ 0.45
PRPF8-216	ENST00000577001	USP6	P35125	1406 aa		17.88	■□□□□ 0.45
PRPF8-216	ENST00000577001	ATP5J2-PTCD1	G3V325	749 aa		17.87	■□□□□ 0.45
PRPF8-216	ENST00000577001	PTCD1	O75127	700 aa	Known RBP	17.87	■□□□□ 0.45
PRPF8-216	ENST00000577001	IFIT2	P09913	472 aa	Known RBP	17.87	■□□□□ 0.45
PRPF8-216	ENST00000577001	DNAAF4	Q8WXU2	420 aa		17.87	■□□□□ 0.45
PRPF8-216	ENST00000577001	PLEKHG3	A1L390	1219 aa		17.87	■□□□□ 0.45
PRPF8-216	ENST00000577001	DLC1	Q96QB1	1528 aa		17.87	■□□□□ 0.45
PRPF8-216	ENST00000577001	SMC3	Q9UQE7	1217 aa		17.87	■□□□□ 0.45
PRPF8-216	ENST00000577001	CWC22	Q9HCG8	908 aa	Known RBP	17.86	■□□□□ 0.45
PRPF8-216	ENST00000577001	FLT4	P35916	1363 aa		17.86	■□□□□ 0.45
PRPF8-216	ENST00000577001	RUFY3	Q7L099	469 aa		17.86	■□□□□ 0.45
PRPF8-216	ENST00000577001	CKAP2L	Q8IYA6	745 aa		17.86	■□□□□ 0.45
PRPF8-216	ENST00000577001	PTPRU	Q92729	1446 aa		17.86	■□□□□ 0.45
PRPF8-216	ENST00000577001	CCDC129	Q6ZRS4	1044 aa		17.85	■□□□□ 0.45
PRPF8-216	ENST00000577001	PRDM10	Q9NQV6	1147 aa		17.85	■□□□□ 0.45
PRPF8-216	ENST00000577001	LRSAM1	Q6UWE0	723 aa		17.85	■□□□□ 0.45
PRPF8-216	ENST00000577001	RAB11FIP4	Q86YS3	637 aa		17.85	■□□□□ 0.45
PRPF8-216	ENST00000577001	KIF20B	Q96Q89	1820 aa		17.85	■□□□□ 0.45
PRPF8-216	ENST00000577001	SYT1	P21579	422 aa		17.85	■□□□□ 0.45
PRPF8-216	ENST00000577001	TSPY26P	Q9H489	355 aa		17.85	■□□□□ 0.45
PRPF8-216	ENST00000577001	BRD1	O95696	1058 aa		17.84	■□□□□ 0.45
PRPF8-216	ENST00000577001	DNAJC2	Q99543	621 aa	Known RBP	17.84	■□□□□ 0.45
PRPF8-216	ENST00000577001	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	17.84	■□□□□ 0.45
PRPF8-216	ENST00000577001	GJB2	P29033	226 aa		17.84	■□□□□ 0.45
PRPF8-216	ENST00000577001	CHRNA2	Q15822	529 aa		17.84	■□□□□ 0.45
PRPF8-216	ENST00000577001	PPP6R1	Q9UPN7	881 aa		17.84	■□□□□ 0.45
PRPF8-216	ENST00000577001	ERCC4	Q92889	916 aa	Predicted RBP	17.83	■□□□□ 0.44
PRPF8-216	ENST00000577001	NLRP2	Q9NX02	1062 aa		17.83	■□□□□ 0.44
PRPF8-216	ENST00000577001	UQCRHL	A0A096LP55	91 aa		17.83	■□□□□ 0.44
PRPF8-216	ENST00000577001	UQCRH	P07919	91 aa		17.83	■□□□□ 0.44
PRPF8-216	ENST00000577001	PI4K2B	Q8TCG2	481 aa		17.83	■□□□□ 0.44
PRPF8-216	ENST00000577001	SEC62	Q99442	399 aa	Known RBP	17.83	■□□□□ 0.44
PRPF8-216	ENST00000577001	CLASRP	Q8N2M8	674 aa	Known RBP	17.82	■□□□□ 0.44
PRPF8-216	ENST00000577001	PHF8	Q9UPP1	1060 aa		17.82	■□□□□ 0.44
PRPF8-216	ENST00000577001	IBTK	Q9P2D0	1353 aa	Predicted RBP	17.82	■□□□□ 0.44
PRPF8-216	ENST00000577001		A0A0G2JS52	829 aa		17.82	■□□□□ 0.44
PRPF8-216	ENST00000577001	ZNF445	P59923	1031 aa		17.82	■□□□□ 0.44
PRPF8-216	ENST00000577001	EIF4A1	P60842	406 aa	Known RBP	17.82	■□□□□ 0.44
PRPF8-216	ENST00000577001	CHST3	Q7LGC8	479 aa		17.82	■□□□□ 0.44
PRPF8-216	ENST00000577001	RIC3	Q7Z5B4	369 aa		17.82	■□□□□ 0.44
PRPF8-216	ENST00000577001	IGSF1	Q8N6C5	1336 aa		17.82	■□□□□ 0.44
PRPF8-216	ENST00000577001	CNTROB	Q8N137	903 aa		17.82	■□□□□ 0.44
PRPF8-216	ENST00000577001	FSD1	Q9BTV5	496 aa		17.82	■□□□□ 0.44
PRPF8-216	ENST00000577001	KIAA0232	Q92628	1395 aa		17.81	■□□□□ 0.44
PRPF8-216	ENST00000577001	CSB-PGBD3	P0DP91	1061 aa		17.81	■□□□□ 0.44
PRPF8-216	ENST00000577001	GUCY1B3	Q02153	619 aa		17.81	■□□□□ 0.44
PRPF8-216	ENST00000577001	C1orf141	Q5JVX7	400 aa		17.81	■□□□□ 0.44
PRPF8-216	ENST00000577001	PDRG1	Q9NUG6	133 aa		17.81	■□□□□ 0.44

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms