RNA–Protein interactions for RNA: ENST00000575154.1

RFWD3-209, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 3

Gene RFWD3, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-209ENST00000575154 CHMP4CQ96CF2 233 aa13.06□□□□□ -0.32
RFWD3-209ENST00000575154 TMEM63CQ9P1W3 806 aa13.06□□□□□ -0.32
RFWD3-209ENST00000575154 RIMS1Q86UR5 1692 aaKnown RBP13.05□□□□□ -0.32
RFWD3-209ENST00000575154 OVOS2A0A0G2JMS6 1433 aa13.05□□□□□ -0.32
RFWD3-209ENST00000575154 SYCE3A1L190 88 aa13.05□□□□□ -0.32
RFWD3-209ENST00000575154 SGSM2O43147 1006 aa13.05□□□□□ -0.32
RFWD3-209ENST00000575154 ANKRD1Q15327 319 aa13.05□□□□□ -0.32
RFWD3-209ENST00000575154 TICAM2Q86XR7 235 aa13.05□□□□□ -0.32
RFWD3-209ENST00000575154 USP25Q9UHP3 1055 aa13.05□□□□□ -0.32
RFWD3-209ENST00000575154 USP54Q70EL1 1684 aa13.05□□□□□ -0.32
RFWD3-209ENST00000575154 APBB1O00213 710 aa13.04□□□□□ -0.32
RFWD3-209ENST00000575154 ALDH1L1O75891 902 aa13.04□□□□□ -0.32
RFWD3-209ENST00000575154 CAVIN2O95810 425 aa13.04□□□□□ -0.32
RFWD3-209ENST00000575154 ZSCAN22P10073 491 aaPredicted RBP13.04□□□□□ -0.32
RFWD3-209ENST00000575154 PSMA5P28066 241 aa13.04□□□□□ -0.32
RFWD3-209ENST00000575154 MTX1Q13505 466 aa13.04□□□□□ -0.32
RFWD3-209ENST00000575154 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
RFWD3-209ENST00000575154 EXOC6BQ9Y2D4 811 aa13.04□□□□□ -0.32
RFWD3-209ENST00000575154 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
RFWD3-209ENST00000575154 SLIT1O75093 1534 aa13.03□□□□□ -0.32
RFWD3-209ENST00000575154 ZKSCAN1P17029 563 aaPredicted RBP13.03□□□□□ -0.32
RFWD3-209ENST00000575154 VPS53Q5VIR6 699 aa13.03□□□□□ -0.32
RFWD3-209ENST00000575154 EYA1Q99502 592 aa13.03□□□□□ -0.32
RFWD3-209ENST00000575154 SMC3Q9UQE7 1217 aa13.03□□□□□ -0.32
RFWD3-209ENST00000575154 UBR1Q8IWV7 1749 aa13.02□□□□□ -0.32
RFWD3-209ENST00000575154 FMN2Q9NZ56 1722 aa13.02□□□□□ -0.32
RFWD3-209ENST00000575154 PKP1Q13835 747 aa13.02□□□□□ -0.33
RFWD3-209ENST00000575154 HDGFL1Q5TGJ6 251 aa13.02□□□□□ -0.33
RFWD3-209ENST00000575154 RHPN1Q8TCX5 695 aa13.02□□□□□ -0.33
RFWD3-209ENST00000575154 KCNB2Q92953 911 aa13.02□□□□□ -0.33
RFWD3-209ENST00000575154 USP44Q9H0E7 712 aa13.02□□□□□ -0.33
RFWD3-209ENST00000575154 LRRFIP2Q9Y608 721 aaKnown RBP13.02□□□□□ -0.33
RFWD3-209ENST00000575154 NCAPD2Q15021 1401 aa13.02□□□□□ -0.33
RFWD3-209ENST00000575154 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.33
RFWD3-209ENST00000575154 PEAK1Q9H792 1746 aa13.02□□□□□ -0.33
RFWD3-209ENST00000575154 F6X3S4 739 aa13.01□□□□□ -0.33
RFWD3-209ENST00000575154 STX6O43752 255 aa13.01□□□□□ -0.33
RFWD3-209ENST00000575154 SURF6O75683 361 aaKnown RBP13.01□□□□□ -0.33
RFWD3-209ENST00000575154 CHAF1AQ13111 956 aaPredicted RBP13.01□□□□□ -0.33
RFWD3-209ENST00000575154 KRT24Q2M2I5 525 aa13.01□□□□□ -0.33
RFWD3-209ENST00000575154 RNF20Q5VTR2 975 aa13.01□□□□□ -0.33
RFWD3-209ENST00000575154 G2E3Q7L622 706 aa13.01□□□□□ -0.33
RFWD3-209ENST00000575154 CLASRPQ8N2M8 674 aaKnown RBP13.01□□□□□ -0.33
RFWD3-209ENST00000575154 ALDH8A1Q9H2A2 487 aaPredicted RBP13.01□□□□□ -0.33
RFWD3-209ENST00000575154 DIAPH3Q9NSV4 1193 aa13.01□□□□□ -0.33
RFWD3-209ENST00000575154 LMTK3Q96Q04 1460 aa13.01□□□□□ -0.33
RFWD3-209ENST00000575154 ARHGAP23Q9P227 1491 aa13.01□□□□□ -0.33
RFWD3-209ENST00000575154 XRN1Q8IZH2 1706 aaKnown RBP13□□□□□ -0.33
RFWD3-209ENST00000575154 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
RFWD3-209ENST00000575154 RPAP1Q9BWH6 1393 aaPredicted RBP13□□□□□ -0.33
RFWD3-209ENST00000575154 AMOTQ4VCS5 1084 aa13□□□□□ -0.33
RFWD3-209ENST00000575154 USP48Q86UV5 1035 aa13□□□□□ -0.33
RFWD3-209ENST00000575154 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
RFWD3-209ENST00000575154 TTC14Q96N46 770 aa13□□□□□ -0.33
RFWD3-209ENST00000575154 R3HCC1Q9Y3T6 440 aaKnown RBP13□□□□□ -0.33
RFWD3-209ENST00000575154 CYP46A1Q9Y6A2 500 aa13□□□□□ -0.33
RFWD3-209ENST00000575154 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
RFWD3-209ENST00000575154 PLEKHG2Q9H7P9 1386 aa12.99□□□□□ -0.33
RFWD3-209ENST00000575154 ELP1O95163 1332 aa12.99□□□□□ -0.33
RFWD3-209ENST00000575154 PNMA6EA0A0J9YXQ4 647 aa12.99□□□□□ -0.33
RFWD3-209ENST00000575154 F13A1P00488 732 aa12.99□□□□□ -0.33
RFWD3-209ENST00000575154 HOXC9P31274 260 aa12.99□□□□□ -0.33
RFWD3-209ENST00000575154 KCNH5Q8NCM2 988 aa12.99□□□□□ -0.33
RFWD3-209ENST00000575154 DNAAF4Q8WXU2 420 aa12.99□□□□□ -0.33
RFWD3-209ENST00000575154 EVI5LQ96CN4 794 aa12.99□□□□□ -0.33
RFWD3-209ENST00000575154 HMG20BQ9P0W2 317 aa12.99□□□□□ -0.33
RFWD3-209ENST00000575154 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
RFWD3-209ENST00000575154 TUBGCP6Q96RT7 1819 aa12.98□□□□□ -0.33
RFWD3-209ENST00000575154 UQCRHLA0A096LP55 91 aa12.98□□□□□ -0.33
RFWD3-209ENST00000575154 UQCRHP07919 91 aa12.98□□□□□ -0.33
RFWD3-209ENST00000575154 CCDC192P0DO97 292 aa12.98□□□□□ -0.33
RFWD3-209ENST00000575154 GTF2F1P35269 517 aaKnown RBP eCLIP12.98□□□□□ -0.33
RFWD3-209ENST00000575154 KRT32Q14532 448 aa12.98□□□□□ -0.33
RFWD3-209ENST00000575154 DHX8Q14562 1220 aaKnown RBP12.98□□□□□ -0.33
RFWD3-209ENST00000575154 PPP1R42Q7Z4L9 355 aa12.98□□□□□ -0.33
RFWD3-209ENST00000575154 THEMISQ8N1K5 641 aaPredicted RBP12.98□□□□□ -0.33
RFWD3-209ENST00000575154 PI4K2BQ8TCG2 481 aa12.98□□□□□ -0.33
RFWD3-209ENST00000575154 LSG1Q9H089 658 aaKnown RBP12.98□□□□□ -0.33
RFWD3-209ENST00000575154 SNRKQ9NRH2 765 aa12.98□□□□□ -0.33
RFWD3-209ENST00000575154 ECHDC1Q9NTX5 307 aa12.98□□□□□ -0.33
RFWD3-209ENST00000575154 SNX14Q9Y5W7 946 aa12.98□□□□□ -0.33
RFWD3-209ENST00000575154 SRGAP3O43295 1099 aa12.97□□□□□ -0.33
RFWD3-209ENST00000575154 KDM4AO75164 1064 aa12.97□□□□□ -0.33
RFWD3-209ENST00000575154 DDX58O95786 925 aaKnown RBP12.97□□□□□ -0.33
RFWD3-209ENST00000575154 NLRP6P59044 892 aa12.97□□□□□ -0.33
RFWD3-209ENST00000575154 MYRIPQ8NFW9 859 aa12.97□□□□□ -0.33
RFWD3-209ENST00000575154 SCAND2PQ9GZW5 306 aaPredicted RBP12.97□□□□□ -0.33
RFWD3-209ENST00000575154 SPTLC3Q9NUV7 552 aa12.97□□□□□ -0.33
RFWD3-209ENST00000575154 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
RFWD3-209ENST00000575154 DBF4Q9UBU7 674 aaPredicted RBP12.97□□□□□ -0.33
RFWD3-209ENST00000575154 PALD1Q9ULE6 856 aa12.97□□□□□ -0.33
RFWD3-209ENST00000575154 AMOTL2Q9Y2J4 779 aa12.97□□□□□ -0.33
RFWD3-209ENST00000575154 RFX7Q2KHR2 1363 aa12.96□□□□□ -0.33
RFWD3-209ENST00000575154 NCKAP5LQ9HCH0 1330 aa12.96□□□□□ -0.33
RFWD3-209ENST00000575154 KRT85P78386 507 aa12.96□□□□□ -0.33
RFWD3-209ENST00000575154 OS9Q13438 667 aaPredicted RBP12.96□□□□□ -0.33
RFWD3-209ENST00000575154 MLECQ14165 292 aa12.96□□□□□ -0.33
RFWD3-209ENST00000575154 PLEKHO1Q53GL0 409 aaPredicted RBP12.96□□□□□ -0.33
RFWD3-209ENST00000575154 SENP3Q9H4L4 574 aaPredicted RBP12.96□□□□□ -0.33
RFWD3-209ENST00000575154 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms