RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 DICER1Q9UPY3 1922 aaKnown RBP16.35■□□□□ 0.21
CTNS-208ENST00000574218 GLTPD2A6NH11 291 aa16.34■□□□□ 0.21
CTNS-208ENST00000574218 HSPA1AP0DMV8 641 aaKnown RBP16.34■□□□□ 0.21
CTNS-208ENST00000574218 HSPA1BP0DMV9 641 aaKnown RBP16.34■□□□□ 0.21
CTNS-208ENST00000574218 TM4SF1P30408 202 aa16.34■□□□□ 0.21
CTNS-208ENST00000574218 NRXN2Q9P2S2 1712 aa16.33■□□□□ 0.21
CTNS-208ENST00000574218 TTLL6Q8N841 843 aa16.33■□□□□ 0.2
CTNS-208ENST00000574218 PCNTO95613 3336 aa16.32■□□□□ 0.2
CTNS-208ENST00000574218 INTS5Q6P9B9 1019 aaKnown RBP16.32■□□□□ 0.2
CTNS-208ENST00000574218 DNAJC10Q8IXB1 793 aa16.32■□□□□ 0.2
CTNS-208ENST00000574218 CACNA1SQ13698 1873 aa16.31■□□□□ 0.2
CTNS-208ENST00000574218 COL15A1P39059 1388 aa16.31■□□□□ 0.2
CTNS-208ENST00000574218 SOS1Q07889 1333 aaPredicted RBP16.31■□□□□ 0.2
CTNS-208ENST00000574218 H0YIN7 160 aa16.31■□□□□ 0.2
CTNS-208ENST00000574218 SULT6B1Q6IMI4 303 aa16.31■□□□□ 0.2
CTNS-208ENST00000574218 DPY19L2Q6NUT2 758 aa16.31■□□□□ 0.2
CTNS-208ENST00000574218 C2CD5Q86YS7 1000 aa16.31■□□□□ 0.2
CTNS-208ENST00000574218 AEBP1Q8IUX7 1158 aa16.31■□□□□ 0.2
CTNS-208ENST00000574218 NFIXQ14938 502 aa16.3■□□□□ 0.2
CTNS-208ENST00000574218 MORC1Q86VD1 984 aa16.3■□□□□ 0.2
CTNS-208ENST00000574218 NARFQ9UHQ1 456 aa16.3■□□□□ 0.2
CTNS-208ENST00000574218 SERPINB2P05120 415 aa16.29■□□□□ 0.2
CTNS-208ENST00000574218 AKAP4Q5JQC9 854 aa16.29■□□□□ 0.2
CTNS-208ENST00000574218 SLC52A2Q9HAB3 445 aa16.28■□□□□ 0.2
CTNS-208ENST00000574218 FER1L6Q2WGJ9 1857 aa16.27■□□□□ 0.2
CTNS-208ENST00000574218 CYP19A1P11511 503 aaPredicted RBP16.27■□□□□ 0.2
CTNS-208ENST00000574218 PDZRN3Q9UPQ7 1066 aa16.27■□□□□ 0.2
CTNS-208ENST00000574218 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.19
CTNS-208ENST00000574218 ZNF622Q969S3 477 aaKnown RBP eCLIP16.26■□□□□ 0.19
CTNS-208ENST00000574218 PANK3Q9H999 370 aa16.26■□□□□ 0.19
CTNS-208ENST00000574218 ZBTB1Q9Y2K1 713 aa16.26■□□□□ 0.19
CTNS-208ENST00000574218 SLC39A6Q13433 755 aa16.25■□□□□ 0.19
CTNS-208ENST00000574218 ERFEQ4G0M1 354 aa16.25■□□□□ 0.19
CTNS-208ENST00000574218 BICDL1Q6ZP65 573 aa16.25■□□□□ 0.19
CTNS-208ENST00000574218 UBR2Q8IWV8 1755 aa16.25■□□□□ 0.19
CTNS-208ENST00000574218 MRC1P22897 1456 aa16.24■□□□□ 0.19
CTNS-208ENST00000574218 A0A087WZG4 1122 aa16.24■□□□□ 0.19
CTNS-208ENST00000574218 NFKBIEO00221 500 aa16.24■□□□□ 0.19
CTNS-208ENST00000574218 NPHP1O15259 732 aa16.24■□□□□ 0.19
CTNS-208ENST00000574218 CANXP27824 592 aaKnown RBP16.24■□□□□ 0.19
CTNS-208ENST00000574218 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
CTNS-208ENST00000574218 COL11A2P13942 1736 aaPredicted RBP16.23■□□□□ 0.19
CTNS-208ENST00000574218 RNMTO43148 476 aaKnown RBP16.23■□□□□ 0.19
CTNS-208ENST00000574218 STARD3NLO95772 234 aa16.23■□□□□ 0.19
CTNS-208ENST00000574218 PDE6BP35913 854 aa16.23■□□□□ 0.19
CTNS-208ENST00000574218 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
CTNS-208ENST00000574218 NPM2Q86SE8 214 aaKnown RBP16.23■□□□□ 0.19
CTNS-208ENST00000574218 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
CTNS-208ENST00000574218 VSIG10Q8N0Z9 540 aa16.23■□□□□ 0.19
CTNS-208ENST00000574218 ZNF219Q9P2Y4 722 aaPredicted RBP16.23■□□□□ 0.19
CTNS-208ENST00000574218 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
CTNS-208ENST00000574218 C21orf2O43822 256 aa16.22■□□□□ 0.19
CTNS-208ENST00000574218 LGR6Q9HBX8 967 aa16.22■□□□□ 0.19
CTNS-208ENST00000574218 CREBZFQ9NS37 354 aa16.22■□□□□ 0.19
CTNS-208ENST00000574218 MKRN1Q9UHC7 482 aaKnown RBP16.22■□□□□ 0.19
CTNS-208ENST00000574218 ARFGEF2Q9Y6D5 1785 aa16.22■□□□□ 0.19
CTNS-208ENST00000574218 CARMIL3Q8ND23 1372 aa16.22■□□□□ 0.19
CTNS-208ENST00000574218 SCN4AP35499 1836 aa16.22■□□□□ 0.19
CTNS-208ENST00000574218 IL13P35225 146 aa16.21■□□□□ 0.19
CTNS-208ENST00000574218 AIDAQ96BJ3 306 aa16.21■□□□□ 0.19
CTNS-208ENST00000574218 BCL2L12Q9HB09 334 aa16.21■□□□□ 0.19
CTNS-208ENST00000574218 KNSTRNQ9Y448 316 aa16.21■□□□□ 0.19
CTNS-208ENST00000574218 EIF4G2P78344 907 aaKnown RBP eCLIP16.2■□□□□ 0.184e-10■■■■■ 50.6
CTNS-208ENST00000574218 BRIP1Q9BX63 1249 aa16.2■□□□□ 0.18
CTNS-208ENST00000574218 TAOK3Q9H2K8 898 aa16.2■□□□□ 0.18
CTNS-208ENST00000574218 ZNF330Q9Y3S2 320 aaPredicted RBP16.2■□□□□ 0.18
CTNS-208ENST00000574218 POTECB2RU33 542 aa16.19■□□□□ 0.18
CTNS-208ENST00000574218 SOGA3Q5TF21 947 aa16.19■□□□□ 0.18
CTNS-208ENST00000574218 SLX4Q8IY92 1834 aa16.18■□□□□ 0.18
CTNS-208ENST00000574218 IQCA1LA6NCM1 817 aa16.18■□□□□ 0.18
CTNS-208ENST00000574218 HMOX1P09601 288 aa16.18■□□□□ 0.18
CTNS-208ENST00000574218 ST5P78524 1137 aa16.18■□□□□ 0.18
CTNS-208ENST00000574218 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
CTNS-208ENST00000574218 CNKSR1Q969H4 720 aa16.18■□□□□ 0.18
CTNS-208ENST00000574218 TBC1D9BQ66K14 1250 aa16.17■□□□□ 0.18
CTNS-208ENST00000574218 TEX13AQ9BXU3 409 aaPredicted RBP16.17■□□□□ 0.18
CTNS-208ENST00000574218 LTBP3Q9NS15 1303 aa16.17■□□□□ 0.18
CTNS-208ENST00000574218 EIF5P55010 431 aaKnown RBP16.16■□□□□ 0.18
CTNS-208ENST00000574218 TEFQ10587 303 aa16.16■□□□□ 0.18
CTNS-208ENST00000574218 PRR5LQ6MZQ0 368 aa16.16■□□□□ 0.18
CTNS-208ENST00000574218 CNBD1Q8NA66 436 aa16.16■□□□□ 0.18
CTNS-208ENST00000574218 SETDB2Q96T68 719 aa16.16■□□□□ 0.18
CTNS-208ENST00000574218 BCORQ6W2J9 1755 aa16.15■□□□□ 0.18
CTNS-208ENST00000574218 CNTNAP1P78357 1384 aa16.15■□□□□ 0.18
CTNS-208ENST00000574218 DDNO94850 711 aaPredicted RBP16.15■□□□□ 0.18
CTNS-208ENST00000574218 HSPA5P11021 654 aaKnown RBP16.15■□□□□ 0.18
CTNS-208ENST00000574218 CTCFP49711 727 aaPredicted RBP16.15■□□□□ 0.18
CTNS-208ENST00000574218 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
CTNS-208ENST00000574218 LDHDQ86WU2 507 aa16.15■□□□□ 0.18
CTNS-208ENST00000574218 CCDC24Q8N4L8 307 aa16.15■□□□□ 0.18
CTNS-208ENST00000574218 PRDM10Q9NQV6 1147 aa16.15■□□□□ 0.18
CTNS-208ENST00000574218 SIPA1L3O60292 1781 aaPredicted RBP16.15■□□□□ 0.18
CTNS-208ENST00000574218 FOXN1O15353 648 aa16.14■□□□□ 0.17
CTNS-208ENST00000574218 STYK1Q6J9G0 422 aa16.14■□□□□ 0.17
CTNS-208ENST00000574218 TBC1D2BQ9UPU7 963 aa16.14■□□□□ 0.17
CTNS-208ENST00000574218 HEG1Q9ULI3 1381 aa16.13■□□□□ 0.17
CTNS-208ENST00000574218 IL6STP40189 918 aaPredicted RBP16.13■□□□□ 0.17
CTNS-208ENST00000574218 PRPF40BQ6NWY9 871 aaKnown RBP16.13■□□□□ 0.17
CTNS-208ENST00000574218 MASTLQ96GX5 879 aa16.13■□□□□ 0.17
CTNS-208ENST00000574218 CLEC11AQ9Y240 323 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms