RNA–Protein interactions for RNA: ENST00000572988.1

NCBP3-202, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 3

Gene NCBP3, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-202ENST00000572988 KIFC2Q96AC6 838 aa7.56□□□□□ -1.2
NCBP3-202ENST00000572988 ZFP42Q96MM3 310 aa7.56□□□□□ -1.2
NCBP3-202ENST00000572988 TSEN34Q9BSV6 310 aaKnown RBP7.56□□□□□ -1.2
NCBP3-202ENST00000572988 MAP3K1Q13233 1512 aa7.56□□□□□ -1.2
NCBP3-202ENST00000572988 DIP2CQ9Y2E4 1556 aa7.55□□□□□ -1.2
NCBP3-202ENST00000572988 KIF3BO15066 747 aa7.55□□□□□ -1.2
NCBP3-202ENST00000572988 RELBQ01201 579 aa7.55□□□□□ -1.2
NCBP3-202ENST00000572988 PROSER2Q86WR7 435 aaPredicted RBP7.55□□□□□ -1.2
NCBP3-202ENST00000572988 RNF135Q8IUD6 432 aa7.55□□□□□ -1.2
NCBP3-202ENST00000572988 LINC00528Q8N1L1 170 aa7.55□□□□□ -1.2
NCBP3-202ENST00000572988 AGBL1Q96MI9 1066 aa7.55□□□□□ -1.2
NCBP3-202ENST00000572988 ABCC1P33527 1531 aa7.55□□□□□ -1.2
NCBP3-202ENST00000572988 MBD5Q9P267 1494 aa7.55□□□□□ -1.2
NCBP3-202ENST00000572988 AGLP35573 1532 aa7.54□□□□□ -1.2
NCBP3-202ENST00000572988 TSPY4P0CV99 314 aa7.54□□□□□ -1.2
NCBP3-202ENST00000572988 TSPY10P0CW01 314 aa7.54□□□□□ -1.2
NCBP3-202ENST00000572988 VEGFBP49765 207 aa7.54□□□□□ -1.2
NCBP3-202ENST00000572988 SAMD9LQ8IVG5 1584 aa7.54□□□□□ -1.2
NCBP3-202ENST00000572988 UHRF1BP1Q6BDS2 1440 aa7.53□□□□□ -1.2
NCBP3-202ENST00000572988 PREX2Q70Z35 1606 aa7.53□□□□□ -1.2
NCBP3-202ENST00000572988 POM121CA8CG34 1229 aa7.53□□□□□ -1.2
NCBP3-202ENST00000572988 LILRA1O75019 489 aa7.53□□□□□ -1.2
NCBP3-202ENST00000572988 ADD1P35611 737 aaKnown RBP7.53□□□□□ -1.2
NCBP3-202ENST00000572988 CC2D2BQ6DHV5 1058 aa7.53□□□□□ -1.2
NCBP3-202ENST00000572988 Q6ZVU0 165 aa7.53□□□□□ -1.2
NCBP3-202ENST00000572988 NXF1Q9UBU9 619 aaKnown RBP7.53□□□□□ -1.2
NCBP3-202ENST00000572988 DHX29Q7Z478 1369 aaKnown RBP7.53□□□□□ -1.2
NCBP3-202ENST00000572988 A2MP01023 1474 aa7.53□□□□□ -1.2
NCBP3-202ENST00000572988 PLEKHH2Q8IVE3 1493 aa7.53□□□□□ -1.2
NCBP3-202ENST00000572988 SYCP2Q9BX26 1530 aa7.52□□□□□ -1.2
NCBP3-202ENST00000572988 ABCA6Q8N139 1617 aa7.52□□□□□ -1.2
NCBP3-202ENST00000572988 KIDINS220Q9ULH0 1771 aa7.52□□□□□ -1.21
NCBP3-202ENST00000572988 REREQ9P2R6 1566 aa7.52□□□□□ -1.21
NCBP3-202ENST00000572988 A6NJR5 290 aa7.52□□□□□ -1.21
NCBP3-202ENST00000572988 MYCP01106 439 aaPredicted RBP7.52□□□□□ -1.21
NCBP3-202ENST00000572988 GMPRP36959 345 aa7.52□□□□□ -1.21
NCBP3-202ENST00000572988 HDGFL1Q5TGJ6 251 aa7.52□□□□□ -1.21
NCBP3-202ENST00000572988 CCDC85AQ96PX6 553 aaPredicted RBP7.52□□□□□ -1.21
NCBP3-202ENST00000572988 ZNF395Q9H8N7 513 aaPredicted RBP7.52□□□□□ -1.21
NCBP3-202ENST00000572988 DOLKQ9UPQ8 538 aa7.52□□□□□ -1.21
NCBP3-202ENST00000572988 CDC42BPAQ5VT25 1732 aa7.52□□□□□ -1.21
NCBP3-202ENST00000572988 CNTLNQ9NXG0 1405 aa7.52□□□□□ -1.21
NCBP3-202ENST00000572988 WASHC2CQ9Y4E1 1318 aa7.52□□□□□ -1.21
NCBP3-202ENST00000572988 ADH1AP07327 375 aa7.51□□□□□ -1.21
NCBP3-202ENST00000572988 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
NCBP3-202ENST00000572988 TSGA10IPQ3SY00 556 aa7.51□□□□□ -1.21
NCBP3-202ENST00000572988 OXLD1Q5BKU9 147 aa7.51□□□□□ -1.21
NCBP3-202ENST00000572988 CDCA7Q9BWT1 371 aaPredicted RBP7.51□□□□□ -1.21
NCBP3-202ENST00000572988 ALG2Q9H553 416 aa7.51□□□□□ -1.21
NCBP3-202ENST00000572988 RTEL1-TNFRSF6BF6WH68 1400 aa7.51□□□□□ -1.21
NCBP3-202ENST00000572988 FER1L4A9Z1Z3 1794 aa7.51□□□□□ -1.21
NCBP3-202ENST00000572988 NCOA2Q15596 1464 aa7.5□□□□□ -1.21
NCBP3-202ENST00000572988 SCTRP47872 440 aa7.5□□□□□ -1.21
NCBP3-202ENST00000572988 ERVK-9P63128 1117 aa7.5□□□□□ -1.21
NCBP3-202ENST00000572988 PHTF2Q8N3S3 785 aa7.5□□□□□ -1.21
NCBP3-202ENST00000572988 SLC16A10Q8TF71 515 aa7.5□□□□□ -1.21
NCBP3-202ENST00000572988 ITSN2Q9NZM3 1697 aa7.5□□□□□ -1.21
NCBP3-202ENST00000572988 ATP5J2-PTCD1G3V325 749 aa7.49□□□□□ -1.21
NCBP3-202ENST00000572988 MAN1A2O60476 641 aa7.49□□□□□ -1.21
NCBP3-202ENST00000572988 SKIP12755 728 aa7.49□□□□□ -1.21
NCBP3-202ENST00000572988 PTGIRP43119 386 aa7.49□□□□□ -1.21
NCBP3-202ENST00000572988 USP4Q13107 963 aa7.49□□□□□ -1.21
NCBP3-202ENST00000572988 FAM50AQ14320 339 aaKnown RBP7.49□□□□□ -1.21
NCBP3-202ENST00000572988 FNBP4Q8N3X1 1017 aaPredicted RBP7.49□□□□□ -1.21
NCBP3-202ENST00000572988 POLMQ9NP87 494 aaPredicted RBP7.49□□□□□ -1.21
NCBP3-202ENST00000572988 PTPRTO14522 1441 aa7.49□□□□□ -1.21
NCBP3-202ENST00000572988 PTPRKQ15262 1439 aa7.49□□□□□ -1.21
NCBP3-202ENST00000572988 CLSPNQ9HAW4 1339 aa7.49□□□□□ -1.21
NCBP3-202ENST00000572988 ATP7AQ04656 1500 aa7.48□□□□□ -1.21
NCBP3-202ENST00000572988 SETD1BQ9UPS6 1966 aaKnown RBP7.48□□□□□ -1.21
NCBP3-202ENST00000572988 FIGNL2A6NMB9 653 aa7.48□□□□□ -1.21
NCBP3-202ENST00000572988 SOBPA7XYQ1 873 aa7.48□□□□□ -1.21
NCBP3-202ENST00000572988 PIK3CDO00329 1044 aa7.48□□□□□ -1.21
NCBP3-202ENST00000572988 NPATQ14207 1427 aa7.48□□□□□ -1.21
NCBP3-202ENST00000572988 MAP7D1Q3KQU3 841 aa7.48□□□□□ -1.21
NCBP3-202ENST00000572988 CYP2U1Q7Z449 544 aa7.48□□□□□ -1.21
NCBP3-202ENST00000572988 PLPP7Q8NBV4 271 aa7.48□□□□□ -1.21
NCBP3-202ENST00000572988 SIRT1Q96EB6 747 aa7.48□□□□□ -1.21
NCBP3-202ENST00000572988 INSM2Q96T92 566 aaPredicted RBP7.48□□□□□ -1.21
NCBP3-202ENST00000572988 LRRC9Q6ZRR7 1453 aa7.48□□□□□ -1.21
NCBP3-202ENST00000572988 ZNF335Q9H4Z2 1342 aaPredicted RBP7.48□□□□□ -1.21
NCBP3-202ENST00000572988 TIAM1Q13009 1591 aa7.47□□□□□ -1.21
NCBP3-202ENST00000572988 TTLL8A6PVC2 850 aa7.47□□□□□ -1.21
NCBP3-202ENST00000572988 MEN1O00255 615 aa7.47□□□□□ -1.21
NCBP3-202ENST00000572988 SPINT1O43278 529 aa7.47□□□□□ -1.21
NCBP3-202ENST00000572988 ADAMTS19Q8TE59 1207 aa7.47□□□□□ -1.21
NCBP3-202ENST00000572988 CALR3Q96L12 384 aaKnown RBP7.47□□□□□ -1.21
NCBP3-202ENST00000572988 OSBPL3Q9H4L5 887 aa7.47□□□□□ -1.21
NCBP3-202ENST00000572988 RRP7BPQ9NSQ0 103 aa7.47□□□□□ -1.21
NCBP3-202ENST00000572988 C3P01024 1663 aa7.47□□□□□ -1.21
NCBP3-202ENST00000572988 ERBB4Q15303 1308 aa7.47□□□□□ -1.21
NCBP3-202ENST00000572988 EHBP1L1Q8N3D4 1523 aa7.47□□□□□ -1.21
NCBP3-202ENST00000572988 STRCQ7RTU9 1775 aa7.46□□□□□ -1.21
NCBP3-202ENST00000572988 NCOA1Q15788 1441 aa7.46□□□□□ -1.21
NCBP3-202ENST00000572988 TRAK2O60296 914 aa7.46□□□□□ -1.22
NCBP3-202ENST00000572988 CTSOP43234 321 aaPredicted RBP7.46□□□□□ -1.22
NCBP3-202ENST00000572988 THEMISQ8N1K5 641 aaPredicted RBP7.46□□□□□ -1.22
NCBP3-202ENST00000572988 IRF7Q92985 503 aa7.46□□□□□ -1.22
NCBP3-202ENST00000572988 GLMNQ92990 594 aa7.46□□□□□ -1.22
NCBP3-202ENST00000572988 ZMYND15Q9H091 742 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms