RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 CCDC30Q5VVM6 783 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 RUFY2Q8WXA3 655 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 ABCC4O15439 1325 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 ZC3H6P61129 1189 aaKnown RBP11.86□□□□□ -0.51
USP43-203ENST00000570827 FLIIQ13045 1269 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
USP43-203ENST00000570827 MYRIPQ8NFW9 859 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 GPATCH3Q96I76 525 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 LIMCH1Q9UPQ0 1083 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 DEPDC5O75140 1603 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 LETM1O95202 739 aaPredicted RBP11.86□□□□□ -0.51
USP43-203ENST00000570827 TNNT1P13805 278 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 KRT85P78386 507 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 PSME1Q06323 249 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 CLASRPQ8N2M8 674 aaKnown RBP11.86□□□□□ -0.51
USP43-203ENST00000570827 MROH2AA6NES4 1674 aa11.86□□□□□ -0.51
USP43-203ENST00000570827 HDGFP51858 240 aaKnown RBP11.85□□□□□ -0.51
USP43-203ENST00000570827 UBE2HP62256 183 aa11.85□□□□□ -0.51
USP43-203ENST00000570827 EIF4A2Q14240 407 aaKnown RBP11.85□□□□□ -0.51
USP43-203ENST00000570827 MAP3K11Q16584 847 aa11.85□□□□□ -0.51
USP43-203ENST00000570827 CCAR2Q8N163 923 aaKnown RBP11.85□□□□□ -0.51
USP43-203ENST00000570827 PRIMPOLQ96LW4 560 aa11.85□□□□□ -0.51
USP43-203ENST00000570827 BCL2L12Q9HB09 334 aa11.85□□□□□ -0.51
USP43-203ENST00000570827 TEFQ10587 303 aa11.85□□□□□ -0.51
USP43-203ENST00000570827 SF3A1Q15459 793 aaKnown RBP11.85□□□□□ -0.51
USP43-203ENST00000570827 MPRIPQ6WCQ1 1025 aa11.85□□□□□ -0.51
USP43-203ENST00000570827 HOMER1Q86YM7 354 aa11.85□□□□□ -0.51
USP43-203ENST00000570827 SPATA32Q96LK8 384 aa11.85□□□□□ -0.51
USP43-203ENST00000570827 FSD1Q9BTV5 496 aa11.85□□□□□ -0.51
USP43-203ENST00000570827 IL13P35225 146 aa11.84□□□□□ -0.51
USP43-203ENST00000570827 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
USP43-203ENST00000570827 PIBF1Q8WXW3 757 aa11.84□□□□□ -0.51
USP43-203ENST00000570827 AMOTL2Q9Y2J4 779 aa11.84□□□□□ -0.51
USP43-203ENST00000570827 VWDEQ8N2E2 1590 aa11.84□□□□□ -0.51
USP43-203ENST00000570827 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.84□□□□□ -0.51
USP43-203ENST00000570827 MLH3Q9UHC1 1453 aa11.84□□□□□ -0.51
USP43-203ENST00000570827 LRMPQ12912 555 aa11.84□□□□□ -0.51
USP43-203ENST00000570827 PYCARDQ9ULZ3 195 aa11.84□□□□□ -0.51
USP43-203ENST00000570827 RAB11FIP3O75154 756 aa11.83□□□□□ -0.52
USP43-203ENST00000570827 MYL6BP14649 208 aa11.83□□□□□ -0.52
USP43-203ENST00000570827 SMAP1Q8IYB5 467 aaPredicted RBP11.83□□□□□ -0.52
USP43-203ENST00000570827 PDLIM2Q96JY6 352 aa11.83□□□□□ -0.52
USP43-203ENST00000570827 F13A1P00488 732 aa11.83□□□□□ -0.52
USP43-203ENST00000570827 FAM177A1Q8N128 213 aaPredicted RBP11.83□□□□□ -0.52
USP43-203ENST00000570827 CCDC85AQ96PX6 553 aaPredicted RBP11.83□□□□□ -0.52
USP43-203ENST00000570827 DACT1Q9NYF0 836 aa11.83□□□□□ -0.52
USP43-203ENST00000570827 TAF7Q15545 349 aaPredicted RBP11.83□□□□□ -0.52
USP43-203ENST00000570827 LRRC59Q96AG4 307 aaKnown RBP11.83□□□□□ -0.52
USP43-203ENST00000570827 SYTL4Q96C24 671 aaPredicted RBP11.83□□□□□ -0.52
USP43-203ENST00000570827 CCDC8Q9H0W5 538 aaPredicted RBP11.83□□□□□ -0.52
USP43-203ENST00000570827 HECW2Q9P2P5 1572 aa11.82□□□□□ -0.52
USP43-203ENST00000570827 ABCC3O15438 1527 aa11.82□□□□□ -0.52
USP43-203ENST00000570827 FRMPD1Q5SYB0 1578 aa11.82□□□□□ -0.52
USP43-203ENST00000570827 NRDCO43847 1150 aa11.82□□□□□ -0.52
USP43-203ENST00000570827 GUCY1B3Q02153 619 aa11.82□□□□□ -0.52
USP43-203ENST00000570827 GNL2Q13823 731 aaKnown RBP11.82□□□□□ -0.52
USP43-203ENST00000570827 ANO6Q4KMQ2 910 aa11.82□□□□□ -0.52
USP43-203ENST00000570827 AACSQ86V21 672 aa11.82□□□□□ -0.52
USP43-203ENST00000570827 TERF1P54274 439 aa11.82□□□□□ -0.52
USP43-203ENST00000570827 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
USP43-203ENST00000570827 SDF4Q9BRK5 362 aa11.82□□□□□ -0.52
USP43-203ENST00000570827 TSPOAP1O95153 1857 aa11.82□□□□□ -0.52
USP43-203ENST00000570827 TNNT3P45378 269 aaPredicted RBP11.81□□□□□ -0.52
USP43-203ENST00000570827 BOLA2Q9H3K6 86 aa11.81□□□□□ -0.52
USP43-203ENST00000570827 CLIP2Q9UDT6 1046 aa11.81□□□□□ -0.52
USP43-203ENST00000570827 RTL1A6NKG5 1358 aa11.81□□□□□ -0.52
USP43-203ENST00000570827 PTPRCP08575 1304 aa11.81□□□□□ -0.52
USP43-203ENST00000570827 STK11IPQ8N1F8 1099 aa11.81□□□□□ -0.52
USP43-203ENST00000570827 PUS7Q96PZ0 661 aaKnown RBP11.81□□□□□ -0.52
USP43-203ENST00000570827 DNAJC25Q9H1X3 360 aa11.81□□□□□ -0.52
USP43-203ENST00000570827 NCOA3Q9Y6Q9 1424 aa11.81□□□□□ -0.52
USP43-203ENST00000570827 HTATSF1O43719 755 aaKnown RBP11.81□□□□□ -0.52
USP43-203ENST00000570827 ZNF165P49910 485 aa11.81□□□□□ -0.52
USP43-203ENST00000570827 G3BP1Q13283 466 aaKnown RBP eCLIP11.81□□□□□ -0.52
USP43-203ENST00000570827 LRRC2Q9BYS8 371 aa11.81□□□□□ -0.52
USP43-203ENST00000570827 CYP2E1P05181 493 aaPredicted RBP11.8□□□□□ -0.52
USP43-203ENST00000570827 UVSSAQ2YD98 709 aa11.8□□□□□ -0.52
USP43-203ENST00000570827 BLOC1S2Q6QNY1 142 aa11.8□□□□□ -0.52
USP43-203ENST00000570827 PHAXQ9H814 394 aaKnown RBP11.8□□□□□ -0.52
USP43-203ENST00000570827 IBTKQ9P2D0 1353 aaPredicted RBP11.8□□□□□ -0.52
USP43-203ENST00000570827 SMC2O95347 1197 aa11.8□□□□□ -0.52
USP43-203ENST00000570827 NAA30Q147X3 362 aaPredicted RBP11.8□□□□□ -0.52
USP43-203ENST00000570827 RHPN1Q8TCX5 695 aa11.8□□□□□ -0.52
USP43-203ENST00000570827 DNAJC2Q99543 621 aaKnown RBP11.8□□□□□ -0.52
USP43-203ENST00000570827 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
USP43-203ENST00000570827 RASEFQ8IZ41 740 aa11.8□□□□□ -0.52
USP43-203ENST00000570827 NLRP2Q9NX02 1062 aa11.8□□□□□ -0.52
USP43-203ENST00000570827 PA2G4Q9UQ80 394 aaKnown RBP11.8□□□□□ -0.52
USP43-203ENST00000570827 NRXN1Q9ULB1 1477 aa11.8□□□□□ -0.52
USP43-203ENST00000570827 MYO3AQ8NEV4 1616 aa11.79□□□□□ -0.52
USP43-203ENST00000570827 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
USP43-203ENST00000570827 CCDC73Q6ZRK6 1079 aa11.79□□□□□ -0.52
USP43-203ENST00000570827 NRBP1Q9UHY1 535 aa11.79□□□□□ -0.52
USP43-203ENST00000570827 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
USP43-203ENST00000570827 TPM3P06753 285 aa11.79□□□□□ -0.52
USP43-203ENST00000570827 DDX17Q92841 729 aaKnown RBP11.79□□□□□ -0.52
USP43-203ENST00000570827 INTS4Q96HW7 963 aaKnown RBP11.79□□□□□ -0.52
USP43-203ENST00000570827 SNX14Q9Y5W7 946 aa11.79□□□□□ -0.52
USP43-203ENST00000570827 ADGRB3O60242 1522 aa11.79□□□□□ -0.52
USP43-203ENST00000570827 RIMS2Q9UQ26 1411 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms