RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ZBTB1Q9Y2K1 713 aa22.8■■□□□ 1.24
MAP1LC3B-208ENST00000570189 AFDNP55196 1824 aaKnown RBP22.8■■□□□ 1.24
MAP1LC3B-208ENST00000570189 ARFGEF1Q9Y6D6 1849 aa22.8■■□□□ 1.24
MAP1LC3B-208ENST00000570189 STARD3NLO95772 234 aa22.79■■□□□ 1.24
MAP1LC3B-208ENST00000570189 FKBP8Q14318 412 aa22.79■■□□□ 1.24
MAP1LC3B-208ENST00000570189 SRP68Q9UHB9 627 aaKnown RBP22.79■■□□□ 1.24
MAP1LC3B-208ENST00000570189 NARFQ9UHQ1 456 aa22.79■■□□□ 1.24
MAP1LC3B-208ENST00000570189 SCN7AQ01118 1682 aa22.78■■□□□ 1.24
MAP1LC3B-208ENST00000570189 TM4SF1P30408 202 aa22.78■■□□□ 1.24
MAP1LC3B-208ENST00000570189 ZPR1O75312 459 aa22.77■■□□□ 1.24
MAP1LC3B-208ENST00000570189 RALBP1Q15311 655 aa22.77■■□□□ 1.24
MAP1LC3B-208ENST00000570189 FMNL2Q96PY5 1086 aa22.77■■□□□ 1.24
MAP1LC3B-208ENST00000570189 EIF5P55010 431 aaKnown RBP22.76■■□□□ 1.23
MAP1LC3B-208ENST00000570189 DDR1Q08345 913 aa22.76■■□□□ 1.23
MAP1LC3B-208ENST00000570189 ADCY9O60503 1353 aa22.76■■□□□ 1.23
MAP1LC3B-208ENST00000570189 POLRMTO00411 1230 aaKnown RBP22.75■■□□□ 1.23
MAP1LC3B-208ENST00000570189 BTBD11A6QL63 1104 aa22.74■■□□□ 1.23
MAP1LC3B-208ENST00000570189 USPL1Q5W0Q7 1092 aa22.74■■□□□ 1.23
MAP1LC3B-208ENST00000570189 RTF1Q92541 710 aaKnown RBP22.74■■□□□ 1.23
MAP1LC3B-208ENST00000570189 PLEKHF1Q96S99 279 aa22.74■■□□□ 1.23
MAP1LC3B-208ENST00000570189 BCORQ6W2J9 1755 aa22.73■■□□□ 1.23
MAP1LC3B-208ENST00000570189 KDM3BQ7LBC6 1761 aa22.73■■□□□ 1.23
MAP1LC3B-208ENST00000570189 DLEC1Q9Y238 1755 aa22.73■■□□□ 1.23
MAP1LC3B-208ENST00000570189 A0A087WZG4 1122 aa22.73■■□□□ 1.23
MAP1LC3B-208ENST00000570189 LAMB4A4D0S4 1761 aa22.72■■□□□ 1.23
MAP1LC3B-208ENST00000570189 IL6STP40189 918 aaPredicted RBP22.72■■□□□ 1.23
MAP1LC3B-208ENST00000570189 BCL2L12Q9HB09 334 aa22.72■■□□□ 1.23
MAP1LC3B-208ENST00000570189 KCNA3P22001 575 aa22.71■■□□□ 1.23
MAP1LC3B-208ENST00000570189 PNNQ9H307 717 aaKnown RBP22.71■■□□□ 1.23
MAP1LC3B-208ENST00000570189 NEFMP07197 916 aa22.7■■□□□ 1.22
MAP1LC3B-208ENST00000570189 MCM10Q7L590 875 aa22.7■■□□□ 1.22
MAP1LC3B-208ENST00000570189 A0A0G2JLW4 131 aa22.69■■□□□ 1.22
MAP1LC3B-208ENST00000570189 KCNQ3O43525 872 aa22.69■■□□□ 1.22
MAP1LC3B-208ENST00000570189 DPEP1P16444 411 aa22.69■■□□□ 1.22
MAP1LC3B-208ENST00000570189 CANXP27824 592 aaKnown RBP22.69■■□□□ 1.22
MAP1LC3B-208ENST00000570189 NFIXQ14938 502 aa22.69■■□□□ 1.22
MAP1LC3B-208ENST00000570189 SNRPA1P09661 255 aaKnown RBP22.67■■□□□ 1.22
MAP1LC3B-208ENST00000570189 TAF7Q15545 349 aaPredicted RBP22.67■■□□□ 1.22
MAP1LC3B-208ENST00000570189 ATP10DQ9P241 1426 aa22.66■■□□□ 1.22
MAP1LC3B-208ENST00000570189 NFE2L2Q16236 605 aa22.66■■□□□ 1.22
MAP1LC3B-208ENST00000570189 MYBBP1AQ9BQG0 1328 aaKnown RBP22.65■■□□□ 1.22
MAP1LC3B-208ENST00000570189 RGL2O15211 777 aa22.65■■□□□ 1.22
MAP1LC3B-208ENST00000570189 DCTN1Q14203 1278 aa22.65■■□□□ 1.22
MAP1LC3B-208ENST00000570189 PNISRQ8TF01 805 aaKnown RBP22.65■■□□□ 1.22
MAP1LC3B-208ENST00000570189 PIM2Q9P1W9 311 aa22.65■■□□□ 1.22
MAP1LC3B-208ENST00000570189 ANKRD31Q8N7Z5 1873 aa22.64■■□□□ 1.22
MAP1LC3B-208ENST00000570189 DDX10Q13206 875 aaKnown RBP22.64■■□□□ 1.21
MAP1LC3B-208ENST00000570189 BCS1LQ9Y276 419 aa22.64■■□□□ 1.21
MAP1LC3B-208ENST00000570189 A1BGP04217 495 aa22.63■■□□□ 1.21
MAP1LC3B-208ENST00000570189 SERPINB2P05120 415 aa22.63■■□□□ 1.21
MAP1LC3B-208ENST00000570189 USP16Q9Y5T5 823 aa22.63■■□□□ 1.21
MAP1LC3B-208ENST00000570189 WWC3Q9ULE0 1092 aa22.62■■□□□ 1.21
MAP1LC3B-208ENST00000570189 SBF1O95248 1867 aa22.62■■□□□ 1.21
MAP1LC3B-208ENST00000570189 MAPK8IP3Q9UPT6 1336 aa22.61■■□□□ 1.21
MAP1LC3B-208ENST00000570189 CAMTA2O94983 1202 aa22.61■■□□□ 1.21
MAP1LC3B-208ENST00000570189 CARMIL3Q8ND23 1372 aa22.61■■□□□ 1.21
MAP1LC3B-208ENST00000570189 DALRD3Q5D0E6 543 aaKnown RBP22.6■■□□□ 1.21
MAP1LC3B-208ENST00000570189 PRAMEF22A3QJZ6 481 aa22.59■■□□□ 1.21
MAP1LC3B-208ENST00000570189 GIGYF1O75420 1035 aaPredicted RBP22.59■■□□□ 1.21
MAP1LC3B-208ENST00000570189 C1QTNF8P60827 252 aa22.59■■□□□ 1.21
MAP1LC3B-208ENST00000570189 TBC1D9BQ66K14 1250 aa22.59■■□□□ 1.21
MAP1LC3B-208ENST00000570189 CLEC4GQ6UXB4 293 aa22.59■■□□□ 1.21
MAP1LC3B-208ENST00000570189 NPM2Q86SE8 214 aaKnown RBP22.59■■□□□ 1.21
MAP1LC3B-208ENST00000570189 PDZRN3Q9UPQ7 1066 aa22.59■■□□□ 1.21
MAP1LC3B-208ENST00000570189 TBC1D2BQ9UPU7 963 aa22.59■■□□□ 1.21
MAP1LC3B-208ENST00000570189 CHRNA5P30532 468 aa22.57■■□□□ 1.2
MAP1LC3B-208ENST00000570189 DZIP3Q86Y13 1208 aaKnown RBP22.57■■□□□ 1.2
MAP1LC3B-208ENST00000570189 BABAM1Q9NWV8 329 aa22.57■■□□□ 1.2
MAP1LC3B-208ENST00000570189 COL11A2P13942 1736 aaPredicted RBP22.57■■□□□ 1.2
MAP1LC3B-208ENST00000570189 ARFGEF2Q9Y6D5 1785 aa22.56■■□□□ 1.2
MAP1LC3B-208ENST00000570189 NBPF26B4DH59 902 aa22.56■■□□□ 1.2
MAP1LC3B-208ENST00000570189 NBPF10Q6P3W6 841 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3B-208ENST00000570189 NBPF15Q8N660 670 aa22.56■■□□□ 1.2
MAP1LC3B-208ENST00000570189 EIF4A1P60842 406 aaKnown RBP22.55■■□□□ 1.2
MAP1LC3B-208ENST00000570189 BRIP1Q9BX63 1249 aa22.55■■□□□ 1.2
MAP1LC3B-208ENST00000570189 GPBP1L1Q9HC44 474 aaPredicted RBP22.55■■□□□ 1.2
MAP1LC3B-208ENST00000570189 ARHGAP27Q6ZUM4 889 aa22.54■■□□□ 1.2
MAP1LC3B-208ENST00000570189 ZNF330Q9Y3S2 320 aaPredicted RBP22.54■■□□□ 1.2
MAP1LC3B-208ENST00000570189 NUP98P52948 1817 aa22.54■■□□□ 1.2
MAP1LC3B-208ENST00000570189 LMOD3Q0VAK6 560 aa22.53■■□□□ 1.2
MAP1LC3B-208ENST00000570189 PRR5LQ6MZQ0 368 aa22.53■■□□□ 1.2
MAP1LC3B-208ENST00000570189 BICDL1Q6ZP65 573 aa22.53■■□□□ 1.2
MAP1LC3B-208ENST00000570189 SETDB2Q96T68 719 aa22.53■■□□□ 1.2
MAP1LC3B-208ENST00000570189 PRKRIP1Q9H875 184 aaPredicted RBP22.53■■□□□ 1.2
MAP1LC3B-208ENST00000570189 MIS18AQ9NYP9 233 aa22.53■■□□□ 1.2
MAP1LC3B-208ENST00000570189 ZNF652Q9Y2D9 606 aa22.53■■□□□ 1.2
MAP1LC3B-208ENST00000570189 PDE6BP35913 854 aa22.52■■□□□ 1.2
MAP1LC3B-208ENST00000570189 TMPOP42166 694 aaKnown RBP22.52■■□□□ 1.2
MAP1LC3B-208ENST00000570189 H0YIN7 160 aa22.51■■□□□ 1.19
MAP1LC3B-208ENST00000570189 RIPK4P57078 832 aa22.51■■□□□ 1.19
MAP1LC3B-208ENST00000570189 TTLL6Q8N841 843 aa22.51■■□□□ 1.19
MAP1LC3B-208ENST00000570189 THUMPD2Q9BTF0 503 aaKnown RBP22.51■■□□□ 1.19
MAP1LC3B-208ENST00000570189 ERBB4Q15303 1308 aa22.51■■□□□ 1.19
MAP1LC3B-208ENST00000570189 FER1L6Q2WGJ9 1857 aa22.5■■□□□ 1.19
MAP1LC3B-208ENST00000570189 PIP4K2AP48426 406 aaPredicted RBP22.5■■□□□ 1.19
MAP1LC3B-208ENST00000570189 C2CD5Q86YS7 1000 aa22.49■■□□□ 1.19
MAP1LC3B-208ENST00000570189 CNBD1Q8NA66 436 aa22.49■■□□□ 1.19
MAP1LC3B-208ENST00000570189 CCDC88AQ3V6T2 1871 aa22.49■■□□□ 1.19
MAP1LC3B-208ENST00000570189 RUNDC1Q96C34 613 aa22.48■■□□□ 1.19
MAP1LC3B-208ENST00000570189 ZC3H4Q9UPT8 1303 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms