RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 INTS6LQ5JSJ4 861 aaKnown RBP8.85□□□□□ -0.99
GDE1-204ENST00000569773 NFATC2IPQ8NCF5 419 aa8.85□□□□□ -0.99
GDE1-204ENST00000569773 CCDC85AQ96PX6 553 aaPredicted RBP8.85□□□□□ -0.99
GDE1-204ENST00000569773 KDM5DQ9BY66 1539 aa8.85□□□□□ -0.99
GDE1-204ENST00000569773 SRCAPQ6ZRS2 3230 aa8.84□□□□□ -0.99
GDE1-204ENST00000569773 A2ML1A8K2U0 1454 aa8.84□□□□□ -0.99
GDE1-204ENST00000569773 EIF2AK4Q9P2K8 1649 aaKnown RBP8.84□□□□□ -0.99
GDE1-204ENST00000569773 USP17L5A8MUK1 530 aa8.84□□□□□ -0.99
GDE1-204ENST00000569773 ADH1CP00326 375 aa8.84□□□□□ -0.99
GDE1-204ENST00000569773 ALDH1A1P00352 501 aa8.84□□□□□ -0.99
GDE1-204ENST00000569773 GRM5P41594 1212 aa8.84□□□□□ -0.99
GDE1-204ENST00000569773 MED1Q15648 1581 aaPredicted RBP8.84□□□□□ -0.99
GDE1-204ENST00000569773 RNF20Q5VTR2 975 aa8.84□□□□□ -0.99
GDE1-204ENST00000569773 DEPDC4Q8N2C3 294 aa8.84□□□□□ -0.99
GDE1-204ENST00000569773 MPNDQ8N594 471 aa8.84□□□□□ -0.99
GDE1-204ENST00000569773 PLPP7Q8NBV4 271 aa8.84□□□□□ -0.99
GDE1-204ENST00000569773 CROCC2H7BZ55 1655 aa8.84□□□□□ -0.99
GDE1-204ENST00000569773 ZC3H13Q5T200 1668 aaKnown RBP8.84□□□□□ -0.99
GDE1-204ENST00000569773 PZPP20742 1482 aa8.83□□□□□ -1
GDE1-204ENST00000569773 GGT6Q6P531 493 aa8.83□□□□□ -1
GDE1-204ENST00000569773 TRIM67Q6ZTA4 783 aa8.83□□□□□ -1
GDE1-204ENST00000569773 SEPT12Q8IYM1 358 aa8.83□□□□□ -1
GDE1-204ENST00000569773 CHIC2Q9UKJ5 165 aa8.83□□□□□ -1
GDE1-204ENST00000569773 CFAP65Q6ZU64 1925 aaKnown RBP8.83□□□□□ -1
GDE1-204ENST00000569773 CEP152O94986 1710 aa8.83□□□□□ -1
GDE1-204ENST00000569773 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.82□□□□□ -1
GDE1-204ENST00000569773 USP17L3A6NCW0 530 aa8.82□□□□□ -1
GDE1-204ENST00000569773 USP17L4A6NCW7 530 aa8.82□□□□□ -1
GDE1-204ENST00000569773 USP17L2Q6R6M4 530 aa8.82□□□□□ -1
GDE1-204ENST00000569773 USP17L1Q7RTZ2 530 aa8.82□□□□□ -1
GDE1-204ENST00000569773 SNIP1Q8TAD8 396 aaKnown RBP8.82□□□□□ -1
GDE1-204ENST00000569773 DOLKQ9UPQ8 538 aa8.82□□□□□ -1
GDE1-204ENST00000569773 PCDHB11Q9Y5F2 797 aa8.82□□□□□ -1
GDE1-204ENST00000569773 LOC105371045A0A1W2PR82 267 aa8.81□□□□□ -1
GDE1-204ENST00000569773 ERVH48-1M5A8F1 160 aa8.81□□□□□ -1
GDE1-204ENST00000569773 NCOA4Q13772 614 aa8.81□□□□□ -1
GDE1-204ENST00000569773 CYP4X1Q8N118 509 aa8.81□□□□□ -1
GDE1-204ENST00000569773 CDCA7Q9BWT1 371 aaPredicted RBP8.81□□□□□ -1
GDE1-204ENST00000569773 ABCC3O15438 1527 aa8.8□□□□□ -1
GDE1-204ENST00000569773 DEPDC5O75140 1603 aa8.8□□□□□ -1
GDE1-204ENST00000569773 TTC24A2A3L6 582 aaPredicted RBP8.8□□□□□ -1
GDE1-204ENST00000569773 J3QL48 77 aa8.8□□□□□ -1
GDE1-204ENST00000569773 NR3C2P08235 984 aa8.8□□□□□ -1
GDE1-204ENST00000569773 NR5A1Q13285 461 aa8.8□□□□□ -1
GDE1-204ENST00000569773 MAP7D1Q3KQU3 841 aa8.8□□□□□ -1
GDE1-204ENST00000569773 OXLD1Q5BKU9 147 aa8.8□□□□□ -1
GDE1-204ENST00000569773 KANK4Q5T7N3 995 aaPredicted RBP8.8□□□□□ -1
GDE1-204ENST00000569773 PLEKHM2Q8IWE5 1019 aa8.8□□□□□ -1
GDE1-204ENST00000569773 WASF2Q9Y6W5 498 aa8.8□□□□□ -1
GDE1-204ENST00000569773 STRCP1A6NGW2 1772 aa8.8□□□□□ -1
GDE1-204ENST00000569773 MYOM3Q5VTT5 1437 aa8.8□□□□□ -1
GDE1-204ENST00000569773 ZNF335Q9H4Z2 1342 aaPredicted RBP8.8□□□□□ -1
GDE1-204ENST00000569773 KIF3BO15066 747 aa8.79□□□□□ -1
GDE1-204ENST00000569773 PRR20EP86478 221 aa8.79□□□□□ -1
GDE1-204ENST00000569773 PRR20CP86479 221 aa8.79□□□□□ -1
GDE1-204ENST00000569773 PRR20DP86480 221 aa8.79□□□□□ -1
GDE1-204ENST00000569773 PRR20BP86481 221 aa8.79□□□□□ -1
GDE1-204ENST00000569773 PRR20AP86496 221 aa8.79□□□□□ -1
GDE1-204ENST00000569773 CDCA8Q53HL2 280 aa8.79□□□□□ -1
GDE1-204ENST00000569773 CCDC116Q8IYX3 515 aa8.79□□□□□ -1
GDE1-204ENST00000569773 TMPRSS4Q9NRS4 437 aa8.79□□□□□ -1
GDE1-204ENST00000569773 TOR4AQ9NXH8 423 aa8.79□□□□□ -1
GDE1-204ENST00000569773 UBR1Q8IWV7 1749 aa8.79□□□□□ -1
GDE1-204ENST00000569773 MIA2Q96PC5 1412 aa8.79□□□□□ -1
GDE1-204ENST00000569773 VWDEQ8N2E2 1590 aa8.78□□□□□ -1
GDE1-204ENST00000569773 NLRP1Q9C000 1473 aa8.78□□□□□ -1
GDE1-204ENST00000569773 TNRQ92752 1358 aa8.78□□□□□ -1
GDE1-204ENST00000569773 NNTQ13423 1086 aa8.78□□□□□ -1
GDE1-204ENST00000569773 EML3Q32P44 896 aa8.78□□□□□ -1
GDE1-204ENST00000569773 PBXIP1Q96AQ6 731 aa8.78□□□□□ -1
GDE1-204ENST00000569773 MED14O60244 1454 aa8.77□□□□□ -1
GDE1-204ENST00000569773 PTPN23Q9H3S7 1636 aa8.77□□□□□ -1.01
GDE1-204ENST00000569773 ALKQ9UM73 1620 aa8.77□□□□□ -1.01
GDE1-204ENST00000569773 PRDM15P57071 1507 aaPredicted RBP8.77□□□□□ -1.01
GDE1-204ENST00000569773 SRPK2P78362 688 aaKnown RBP8.77□□□□□ -1.01
GDE1-204ENST00000569773 DHX9Q08211 1270 aaKnown RBP8.77□□□□□ -1.01
GDE1-204ENST00000569773 PPP1R26Q5T8A7 1209 aaPredicted RBP8.77□□□□□ -1.01
GDE1-204ENST00000569773 CCDC125Q86Z20 511 aa8.77□□□□□ -1.01
GDE1-204ENST00000569773 IQGAP1P46940 1657 aa8.77□□□□□ -1.01
GDE1-204ENST00000569773 UGGT1Q9NYU2 1555 aa8.77□□□□□ -1.01
GDE1-204ENST00000569773 SHANK2Q9UPX8 1470 aa8.77□□□□□ -1.01
GDE1-204ENST00000569773 DUOX2Q9NRD8 1548 aa8.76□□□□□ -1.01
GDE1-204ENST00000569773 LZTS3O60299 673 aaPredicted RBP8.76□□□□□ -1.01
GDE1-204ENST00000569773 SMPD1P17405 629 aa8.76□□□□□ -1.01
GDE1-204ENST00000569773 SCTRP47872 440 aa8.76□□□□□ -1.01
GDE1-204ENST00000569773 ZNF784Q8NCA9 323 aaPredicted RBP8.76□□□□□ -1.01
GDE1-204ENST00000569773 VRTNQ9H8Y1 702 aa8.76□□□□□ -1.01
GDE1-204ENST00000569773 MKRN1Q9UHC7 482 aaKnown RBP8.76□□□□□ -1.01
GDE1-204ENST00000569773 PDZRN3Q9UPQ7 1066 aa8.76□□□□□ -1.01
GDE1-204ENST00000569773 ERVK-7P63135 1459 aa8.76□□□□□ -1.01
GDE1-204ENST00000569773 XIRP1Q702N8 1843 aaKnown RBP8.75□□□□□ -1.01
GDE1-204ENST00000569773 PPP1R15AO75807 674 aaPredicted RBP8.75□□□□□ -1.01
GDE1-204ENST00000569773 CYLDQ9NQC7 956 aa8.75□□□□□ -1.01
GDE1-204ENST00000569773 WASHC2CQ9Y4E1 1318 aa8.75□□□□□ -1.01
GDE1-204ENST00000569773 CPS1P31327 1500 aa8.75□□□□□ -1.01
GDE1-204ENST00000569773 ABCC5O15440 1437 aa8.74□□□□□ -1.01
GDE1-204ENST00000569773 TSPY4P0CV99 314 aa8.74□□□□□ -1.01
GDE1-204ENST00000569773 TSPY10P0CW01 314 aa8.74□□□□□ -1.01
GDE1-204ENST00000569773 USP4Q13107 963 aa8.74□□□□□ -1.01
GDE1-204ENST00000569773 NOD1Q9Y239 953 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms