RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 PIP4K2AP48426 406 aaPredicted RBP13.79□□□□□ -0.2
PDXDC1-216ENST00000569715 RGS3P49796 1198 aa13.79□□□□□ -0.2
PDXDC1-216ENST00000569715 UNC5CLQ8IV45 518 aa13.79□□□□□ -0.2
PDXDC1-216ENST00000569715 ADCY9O60503 1353 aa13.79□□□□□ -0.2
PDXDC1-216ENST00000569715 ATP10DQ9P241 1426 aa13.79□□□□□ -0.2
PDXDC1-216ENST00000569715 CCT4P50991 539 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-216ENST00000569715 SNRPA1P09661 255 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-216ENST00000569715 TMOD3Q9NYL9 352 aa13.79□□□□□ -0.2
PDXDC1-216ENST00000569715 THRAP3Q9Y2W1 955 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-216ENST00000569715 CHMP4BQ9H444 224 aaKnown RBP13.78□□□□□ -0.2
PDXDC1-216ENST00000569715 SPATA31A6Q5VVP1 1343 aa13.78□□□□□ -0.2
PDXDC1-216ENST00000569715 PI4KAP2A4QPH2 592 aa13.78□□□□□ -0.2
PDXDC1-216ENST00000569715 PI4KAP1Q8N8J0 262 aa13.78□□□□□ -0.2
PDXDC1-216ENST00000569715 PIGBQ92521 554 aa13.78□□□□□ -0.2
PDXDC1-216ENST00000569715 PTCD1O75127 700 aaKnown RBP13.78□□□□□ -0.2
PDXDC1-216ENST00000569715 PDZRN3Q9UPQ7 1066 aa13.78□□□□□ -0.2
PDXDC1-216ENST00000569715 MYL6BP14649 208 aa13.77□□□□□ -0.2
PDXDC1-216ENST00000569715 CHMP4AQ9BY43 222 aa13.77□□□□□ -0.2
PDXDC1-216ENST00000569715 DDX21Q9NR30 783 aaKnown RBP eCLIP13.77□□□□□ -0.2
PDXDC1-216ENST00000569715 DDB1Q16531 1140 aa13.77□□□□□ -0.21
PDXDC1-216ENST00000569715 ASAP1Q9ULH1 1129 aa13.77□□□□□ -0.21
PDXDC1-216ENST00000569715 CDCA7Q9BWT1 371 aaPredicted RBP13.76□□□□□ -0.21
PDXDC1-216ENST00000569715 AIMP1Q12904 312 aaKnown RBP13.76□□□□□ -0.21
PDXDC1-216ENST00000569715 FNBP4Q8N3X1 1017 aaPredicted RBP13.76□□□□□ -0.21
PDXDC1-216ENST00000569715 HYPKQ9NX55 129 aa13.76□□□□□ -0.21
PDXDC1-216ENST00000569715 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.76□□□□□ -0.21
PDXDC1-216ENST00000569715 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
PDXDC1-216ENST00000569715 BARGINQ6ZT62 677 aa13.76□□□□□ -0.21
PDXDC1-216ENST00000569715 DNAAF4Q8WXU2 420 aa13.76□□□□□ -0.21
PDXDC1-216ENST00000569715 LRP10Q7Z4F1 713 aa13.75□□□□□ -0.21
PDXDC1-216ENST00000569715 SMC5Q8IY18 1101 aa13.75□□□□□ -0.21
PDXDC1-216ENST00000569715 MARCH10Q8NA82 808 aaPredicted RBP13.75□□□□□ -0.21
PDXDC1-216ENST00000569715 BCL9O00512 1426 aa13.75□□□□□ -0.21
PDXDC1-216ENST00000569715 VPS72Q15906 364 aa13.75□□□□□ -0.21
PDXDC1-216ENST00000569715 MAP3K2Q9Y2U5 619 aa13.75□□□□□ -0.21
PDXDC1-216ENST00000569715 BEND3Q5T5X7 828 aa13.74□□□□□ -0.21
PDXDC1-216ENST00000569715 CEP85Q6P2H3 762 aa13.74□□□□□ -0.21
PDXDC1-216ENST00000569715 SYTL4Q96C24 671 aaPredicted RBP13.74□□□□□ -0.21
PDXDC1-216ENST00000569715 ATG3Q9NT62 314 aa13.74□□□□□ -0.21
PDXDC1-216ENST00000569715 USP21Q9UK80 565 aa13.74□□□□□ -0.21
PDXDC1-216ENST00000569715 XAGE3Q8WTP9 111 aa13.74□□□□□ -0.21
PDXDC1-216ENST00000569715 USP44Q9H0E7 712 aa13.74□□□□□ -0.21
PDXDC1-216ENST00000569715 RBM19Q9Y4C8 960 aaKnown RBP13.74□□□□□ -0.21
PDXDC1-216ENST00000569715 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
PDXDC1-216ENST00000569715 PRIM1P49642 420 aaKnown RBP13.73□□□□□ -0.21
PDXDC1-216ENST00000569715 NBPF14Q5TI25 921 aa13.73□□□□□ -0.21
PDXDC1-216ENST00000569715 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
PDXDC1-216ENST00000569715 KSR2Q6VAB6 950 aa13.73□□□□□ -0.21
PDXDC1-216ENST00000569715 NBPF15Q8N660 670 aa13.73□□□□□ -0.21
PDXDC1-216ENST00000569715 ANKRD44Q8N8A2 993 aa13.73□□□□□ -0.21
PDXDC1-216ENST00000569715 SRCIN1Q9C0H9 1055 aa13.73□□□□□ -0.21
PDXDC1-216ENST00000569715 MEX3CQ5U5Q3 659 aaKnown RBP13.72□□□□□ -0.21
PDXDC1-216ENST00000569715 COPS6Q7L5N1 327 aa13.72□□□□□ -0.21
PDXDC1-216ENST00000569715 ARFGEF2Q9Y6D5 1785 aa13.72□□□□□ -0.21
PDXDC1-216ENST00000569715 ACSBG1Q96GR2 724 aa13.72□□□□□ -0.21
PDXDC1-216ENST00000569715 A1BGP04217 495 aa13.71□□□□□ -0.21
PDXDC1-216ENST00000569715 PDE4AP27815 886 aa13.71□□□□□ -0.21
PDXDC1-216ENST00000569715 CWF19L2Q2TBE0 894 aaKnown RBP13.71□□□□□ -0.21
PDXDC1-216ENST00000569715 A0A0G2JS52 829 aa13.71□□□□□ -0.21
PDXDC1-216ENST00000569715 GNAI2P04899 355 aa13.71□□□□□ -0.21
PDXDC1-216ENST00000569715 LRRFIP2Q9Y608 721 aaKnown RBP13.71□□□□□ -0.21
PDXDC1-216ENST00000569715 SLC4A9Q96Q91 983 aa13.71□□□□□ -0.22
PDXDC1-216ENST00000569715 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.22
PDXDC1-216ENST00000569715 THSD7AQ9UPZ6 1657 aa13.7□□□□□ -0.22
PDXDC1-216ENST00000569715 GNAI3P08754 354 aa13.7□□□□□ -0.22
PDXDC1-216ENST00000569715 NBPF7P0C2Y1 421 aaPredicted RBP13.7□□□□□ -0.22
PDXDC1-216ENST00000569715 NUCB1Q02818 461 aa13.7□□□□□ -0.22
PDXDC1-216ENST00000569715 DNAJC10Q8IXB1 793 aa13.7□□□□□ -0.22
PDXDC1-216ENST00000569715 RPAP2Q8IXW5 612 aaPredicted RBP13.7□□□□□ -0.22
PDXDC1-216ENST00000569715 AFF2P51816 1311 aa13.7□□□□□ -0.22
PDXDC1-216ENST00000569715 DDX58O95786 925 aaKnown RBP13.7□□□□□ -0.22
PDXDC1-216ENST00000569715 TJP1Q07157 1748 aa13.7□□□□□ -0.22
PDXDC1-216ENST00000569715 UBTFL1P0CB47 393 aaPredicted RBP13.69□□□□□ -0.22
PDXDC1-216ENST00000569715 RIC3Q7Z5B4 369 aa13.69□□□□□ -0.22
PDXDC1-216ENST00000569715 LNPKQ9C0E8 428 aa13.69□□□□□ -0.22
PDXDC1-216ENST00000569715 NUP188Q5SRE5 1749 aa13.69□□□□□ -0.22
PDXDC1-216ENST00000569715 AFDNP55196 1824 aaKnown RBP13.69□□□□□ -0.22
PDXDC1-216ENST00000569715 GCC1Q96CN9 775 aa13.69□□□□□ -0.22
PDXDC1-216ENST00000569715 IGKV5-2P06315 115 aa13.68□□□□□ -0.22
PDXDC1-216ENST00000569715 ERBB4Q15303 1308 aa13.68□□□□□ -0.22
PDXDC1-216ENST00000569715 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
PDXDC1-216ENST00000569715 ANKRD45Q5TZF3 282 aa13.68□□□□□ -0.22
PDXDC1-216ENST00000569715 DCTPP1Q9H773 170 aa13.68□□□□□ -0.22
PDXDC1-216ENST00000569715 TTLL7Q6ZT98 887 aa13.68□□□□□ -0.22
PDXDC1-216ENST00000569715 ANKRD13DQ6ZTN6 518 aa13.68□□□□□ -0.22
PDXDC1-216ENST00000569715 CHD1LQ86WJ1 897 aa13.68□□□□□ -0.22
PDXDC1-216ENST00000569715 BACH2Q9BYV9 841 aa13.68□□□□□ -0.22
PDXDC1-216ENST00000569715 KCNQ2O43526 872 aa13.67□□□□□ -0.22
PDXDC1-216ENST00000569715 LINS1Q8NG48 757 aa13.67□□□□□ -0.22
PDXDC1-216ENST00000569715 ALDH1L1O75891 902 aa13.67□□□□□ -0.22
PDXDC1-216ENST00000569715 VSIG10Q8N0Z9 540 aa13.67□□□□□ -0.22
PDXDC1-216ENST00000569715 MYD88Q99836 296 aa13.67□□□□□ -0.22
PDXDC1-216ENST00000569715 C8orf34Q49A92 452 aa13.66□□□□□ -0.22
PDXDC1-216ENST00000569715 METTL22Q9BUU2 404 aaPredicted RBP13.66□□□□□ -0.22
PDXDC1-216ENST00000569715 ATRNO75882 1429 aa13.65□□□□□ -0.22
PDXDC1-216ENST00000569715 APBB1O00213 710 aa13.65□□□□□ -0.22
PDXDC1-216ENST00000569715 FAM182BQ5T319 152 aa13.65□□□□□ -0.22
PDXDC1-216ENST00000569715 GJD4Q96KN9 370 aaPredicted RBP13.65□□□□□ -0.22
PDXDC1-216ENST00000569715 NEURL1BA8MQ27 555 aa13.65□□□□□ -0.22
PDXDC1-216ENST00000569715 ATP8B2P98198 1209 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms