RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 NFX1Q12986 1120 aaKnown RBP9.18□□□□□ -0.94
LINC00556-201ENST00000569603 CDK12Q9NYV4 1490 aaPredicted RBP9.18□□□□□ -0.94
LINC00556-201ENST00000569603 NRXN1Q9ULB1 1477 aa9.18□□□□□ -0.94
LINC00556-201ENST00000569603 KNDC1Q76NI1 1749 aa9.17□□□□□ -0.94
LINC00556-201ENST00000569603 COL22A1Q8NFW1 1626 aaPredicted RBP9.17□□□□□ -0.94
LINC00556-201ENST00000569603 PIK3C2GO75747 1445 aa9.17□□□□□ -0.94
LINC00556-201ENST00000569603 SOS2Q07890 1332 aaPredicted RBP9.17□□□□□ -0.94
LINC00556-201ENST00000569603 ADGRF5Q8IZF2 1346 aa9.17□□□□□ -0.94
LINC00556-201ENST00000569603 LCE2CQ5TA81 110 aa9.17□□□□□ -0.94
LINC00556-201ENST00000569603 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
LINC00556-201ENST00000569603 NUTM1Q86Y26 1132 aa9.17□□□□□ -0.94
LINC00556-201ENST00000569603 DDX17Q92841 729 aaKnown RBP9.17□□□□□ -0.94
LINC00556-201ENST00000569603 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
LINC00556-201ENST00000569603 FDX1P10109 184 aa9.16□□□□□ -0.94
LINC00556-201ENST00000569603 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.16□□□□□ -0.94
LINC00556-201ENST00000569603 PXDNQ92626 1479 aa9.15□□□□□ -0.94
LINC00556-201ENST00000569603 ZNF772Q68DY9 489 aaPredicted RBP9.15□□□□□ -0.94
LINC00556-201ENST00000569603 TRIM47Q96LD4 638 aa9.15□□□□□ -0.94
LINC00556-201ENST00000569603 CCDC144AA2RUR9 1427 aa9.14□□□□□ -0.95
LINC00556-201ENST00000569603 LRPPRCP42704 1394 aaKnown RBP9.14□□□□□ -0.95
LINC00556-201ENST00000569603 ABCC11Q96J66 1382 aa9.14□□□□□ -0.95
LINC00556-201ENST00000569603 ANKRD30BQ9BXX2 1392 aa9.14□□□□□ -0.95
LINC00556-201ENST00000569603 ALDH1A1P00352 501 aa9.14□□□□□ -0.95
LINC00556-201ENST00000569603 KRI1Q8N9T8 703 aaKnown RBP9.14□□□□□ -0.95
LINC00556-201ENST00000569603 TRIM52Q96A61 297 aa9.14□□□□□ -0.95
LINC00556-201ENST00000569603 LRRC59Q96AG4 307 aaKnown RBP9.14□□□□□ -0.95
LINC00556-201ENST00000569603 ORAI2Q96SN7 254 aa9.14□□□□□ -0.95
LINC00556-201ENST00000569603 MPHOSPH9Q99550 1183 aa9.14□□□□□ -0.95
LINC00556-201ENST00000569603 MYOM2P54296 1465 aa9.14□□□□□ -0.95
LINC00556-201ENST00000569603 C6orf229H3BNL8 230 aa9.13□□□□□ -0.95
LINC00556-201ENST00000569603 SIAH2O43255 324 aa9.13□□□□□ -0.95
LINC00556-201ENST00000569603 STK17AQ9UEE5 414 aa9.13□□□□□ -0.95
LINC00556-201ENST00000569603 FMN2Q9NZ56 1722 aa9.13□□□□□ -0.95
LINC00556-201ENST00000569603 PLEKHH1Q9ULM0 1364 aa9.12□□□□□ -0.95
LINC00556-201ENST00000569603 AFF2P51816 1311 aa9.12□□□□□ -0.95
LINC00556-201ENST00000569603 NDUFV2P19404 249 aa9.12□□□□□ -0.95
LINC00556-201ENST00000569603 SSTR3P32745 418 aaPredicted RBP9.12□□□□□ -0.95
LINC00556-201ENST00000569603 SPIRE2Q8WWL2 714 aa9.12□□□□□ -0.95
LINC00556-201ENST00000569603 RGS12O14924 1447 aa9.12□□□□□ -0.95
LINC00556-201ENST00000569603 MARF1Q9Y4F3 1742 aaKnown RBP9.11□□□□□ -0.95
LINC00556-201ENST00000569603 MOXD2PA6NHM9 499 aa9.11□□□□□ -0.95
LINC00556-201ENST00000569603 EHBP1Q8NDI1 1231 aa9.11□□□□□ -0.95
LINC00556-201ENST00000569603 YTHDC2Q9H6S0 1430 aaKnown RBP9.11□□□□□ -0.95
LINC00556-201ENST00000569603 ADGRB1O14514 1584 aa9.11□□□□□ -0.95
LINC00556-201ENST00000569603 NUTM2BA6NNL0 878 aaPredicted RBP9.1□□□□□ -0.95
LINC00556-201ENST00000569603 NUTM2EB1AL46 878 aaPredicted RBP9.1□□□□□ -0.95
LINC00556-201ENST00000569603 CCNYL3P0C7X3 344 aa9.1□□□□□ -0.95
LINC00556-201ENST00000569603 MS4A1P11836 297 aa9.1□□□□□ -0.95
LINC00556-201ENST00000569603 SH3BP2P78314 561 aa9.1□□□□□ -0.95
LINC00556-201ENST00000569603 INSM1Q01101 510 aaPredicted RBP9.1□□□□□ -0.95
LINC00556-201ENST00000569603 NUTM2AQ8IVF1 878 aaPredicted RBP9.1□□□□□ -0.95
LINC00556-201ENST00000569603 FNBP4Q8N3X1 1017 aaPredicted RBP9.1□□□□□ -0.95
LINC00556-201ENST00000569603 SIRT1Q96EB6 747 aa9.1□□□□□ -0.95
LINC00556-201ENST00000569603 C14orf93Q9H972 538 aaKnown RBP9.1□□□□□ -0.95
LINC00556-201ENST00000569603 SENP2Q9HC62 589 aa9.1□□□□□ -0.95
LINC00556-201ENST00000569603 RGPD8O14715 1765 aaPredicted RBP9.09□□□□□ -0.95
LINC00556-201ENST00000569603 BCL9LQ86UU0 1499 aa9.09□□□□□ -0.95
LINC00556-201ENST00000569603 ATRNO75882 1429 aa9.09□□□□□ -0.95
LINC00556-201ENST00000569603 RXRBP28702 533 aa9.09□□□□□ -0.95
LINC00556-201ENST00000569603 MEX3CQ5U5Q3 659 aaKnown RBP9.09□□□□□ -0.95
LINC00556-201ENST00000569603 WAPLQ7Z5K2 1190 aa9.09□□□□□ -0.95
LINC00556-201ENST00000569603 ADGRB2O60241 1585 aa9.08□□□□□ -0.96
LINC00556-201ENST00000569603 KIF1AQ12756 1690 aa9.08□□□□□ -0.96
LINC00556-201ENST00000569603 TERTO14746 1132 aaKnown RBP9.08□□□□□ -0.96
LINC00556-201ENST00000569603 WIPF1O43516 503 aa9.08□□□□□ -0.96
LINC00556-201ENST00000569603 BMP1P13497 986 aa9.08□□□□□ -0.96
LINC00556-201ENST00000569603 TTLL12Q14166 644 aaPredicted RBP9.08□□□□□ -0.96
LINC00556-201ENST00000569603 RGL3Q3MIN7 710 aa9.08□□□□□ -0.96
LINC00556-201ENST00000569603 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
LINC00556-201ENST00000569603 TMEM132EQ6IEE7 984 aa9.08□□□□□ -0.96
LINC00556-201ENST00000569603 BARGINQ6ZT62 677 aa9.08□□□□□ -0.96
LINC00556-201ENST00000569603 DLC1Q96QB1 1528 aa9.08□□□□□ -0.96
LINC00556-201ENST00000569603 USP32Q8NFA0 1604 aa9.08□□□□□ -0.96
LINC00556-201ENST00000569603 RAB3GAP2Q9H2M9 1393 aa9.08□□□□□ -0.96
LINC00556-201ENST00000569603 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.08□□□□□ -0.96
LINC00556-201ENST00000569603 RBM6P78332 1123 aaKnown RBP9.07□□□□□ -0.96
LINC00556-201ENST00000569603 AMHR2Q16671 573 aa9.07□□□□□ -0.96
LINC00556-201ENST00000569603 PTPRNQ16849 979 aa9.07□□□□□ -0.96
LINC00556-201ENST00000569603 GIGYF2Q6Y7W6 1299 aaKnown RBP9.07□□□□□ -0.96
LINC00556-201ENST00000569603 TRIM46Q7Z4K8 759 aa9.07□□□□□ -0.96
LINC00556-201ENST00000569603 C8orf37Q96NL8 207 aa9.07□□□□□ -0.96
LINC00556-201ENST00000569603 UNC93B1Q9H1C4 597 aa9.07□□□□□ -0.96
LINC00556-201ENST00000569603 NPHP3Q7Z494 1330 aa9.06□□□□□ -0.96
LINC00556-201ENST00000569603 ACIN1Q9UKV3 1341 aaKnown RBP9.06□□□□□ -0.96
LINC00556-201ENST00000569603 ABCA3Q99758 1704 aa9.06□□□□□ -0.96
LINC00556-201ENST00000569603 ZMYND10O75800 440 aa9.06□□□□□ -0.96
LINC00556-201ENST00000569603 PRR7Q8TB68 274 aa9.06□□□□□ -0.96
LINC00556-201ENST00000569603 KIFC2Q96AC6 838 aa9.06□□□□□ -0.96
LINC00556-201ENST00000569603 QTRT2Q9H974 415 aaKnown RBP9.06□□□□□ -0.96
LINC00556-201ENST00000569603 TLL2Q9Y6L7 1015 aa9.06□□□□□ -0.96
LINC00556-201ENST00000569603 SLIT2O94813 1529 aa9.05□□□□□ -0.96
LINC00556-201ENST00000569603 FOXO3O43524 673 aa9.05□□□□□ -0.96
LINC00556-201ENST00000569603 ADAMTS2O95450 1211 aa9.05□□□□□ -0.96
LINC00556-201ENST00000569603 ESCO1Q5FWF5 840 aa9.05□□□□□ -0.96
LINC00556-201ENST00000569603 EVA1BQ9NVM1 165 aa9.05□□□□□ -0.96
LINC00556-201ENST00000569603 STK26Q9P289 416 aa9.05□□□□□ -0.96
LINC00556-201ENST00000569603 WASF2Q9Y6W5 498 aa9.05□□□□□ -0.96
LINC00556-201ENST00000569603 TRPM3Q9HCF6 1732 aaPredicted RBP9.05□□□□□ -0.96
LINC00556-201ENST00000569603 SPATA31A3Q5VYP0 1347 aa9.05□□□□□ -0.96
LINC00556-201ENST00000569603 CAPN5O15484 640 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms