RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 BMP2KLQ5H9B9 411 aa19.39■□□□□ 0.69
SNX20-204ENST00000568993 DDRGK1Q96HY6 314 aa19.39■□□□□ 0.69
SNX20-204ENST00000568993 ANXA1P04083 346 aa19.38■□□□□ 0.69
SNX20-204ENST00000568993 SNRPA1P09661 255 aaKnown RBP19.38■□□□□ 0.69
SNX20-204ENST00000568993 KSR2Q6VAB6 950 aa19.38■□□□□ 0.69
SNX20-204ENST00000568993 TTC5Q8N0Z6 440 aa19.38■□□□□ 0.69
SNX20-204ENST00000568993 FMNL2Q96PY5 1086 aa19.38■□□□□ 0.69
SNX20-204ENST00000568993 NOP58Q9Y2X3 529 aaKnown RBP19.38■□□□□ 0.69
SNX20-204ENST00000568993 BTG4Q9NY30 223 aa19.37■□□□□ 0.69
SNX20-204ENST00000568993 UBTFL1P0CB47 393 aaPredicted RBP19.37■□□□□ 0.69
SNX20-204ENST00000568993 ZBTB47Q9UFB7 747 aaPredicted RBP19.37■□□□□ 0.69
SNX20-204ENST00000568993 IBTKQ9P2D0 1353 aaPredicted RBP19.37■□□□□ 0.69
SNX20-204ENST00000568993 COL16A1Q07092 1604 aaPredicted RBP19.37■□□□□ 0.69
SNX20-204ENST00000568993 ALDH1L1O75891 902 aa19.36■□□□□ 0.69
SNX20-204ENST00000568993 GLI3P10071 1580 aa19.36■□□□□ 0.69
SNX20-204ENST00000568993 LRRFIP2Q9Y608 721 aaKnown RBP19.35■□□□□ 0.69
SNX20-204ENST00000568993 UBR2Q8IWV8 1755 aa19.34■□□□□ 0.69
SNX20-204ENST00000568993 DDX58O95786 925 aaKnown RBP19.34■□□□□ 0.69
SNX20-204ENST00000568993 PLEKHM2Q8IWE5 1019 aa19.34■□□□□ 0.69
SNX20-204ENST00000568993 MAP3K2Q9Y2U5 619 aa19.34■□□□□ 0.69
SNX20-204ENST00000568993 PAPPAQ13219 1627 aa19.34■□□□□ 0.69
SNX20-204ENST00000568993 LAMB4A4D0S4 1761 aa19.33■□□□□ 0.69
SNX20-204ENST00000568993 DISP2A7MBM2 1401 aa19.33■□□□□ 0.69
SNX20-204ENST00000568993 PHLPP1O60346 1717 aa19.33■□□□□ 0.69
SNX20-204ENST00000568993 PNMA6EA0A0J9YXQ4 647 aa19.32■□□□□ 0.68
SNX20-204ENST00000568993 LRP10Q7Z4F1 713 aa19.32■□□□□ 0.68
SNX20-204ENST00000568993 SSH3Q8TE77 659 aa19.32■□□□□ 0.68
SNX20-204ENST00000568993 UPF2Q9HAU5 1272 aaKnown RBP19.32■□□□□ 0.68
SNX20-204ENST00000568993 USP16Q9Y5T5 823 aa19.32■□□□□ 0.68
SNX20-204ENST00000568993 PLCH1Q4KWH8 1693 aa19.31■□□□□ 0.68
SNX20-204ENST00000568993 LINS1Q8NG48 757 aa19.31■□□□□ 0.68
SNX20-204ENST00000568993 DDX54Q8TDD1 881 aaKnown RBP19.31■□□□□ 0.68
SNX20-204ENST00000568993 ERBB4Q15303 1308 aa19.31■□□□□ 0.68
SNX20-204ENST00000568993 NBPF7P0C2Y1 421 aaPredicted RBP19.3■□□□□ 0.68
SNX20-204ENST00000568993 POLA2Q14181 598 aa19.3■□□□□ 0.68
SNX20-204ENST00000568993 TBC1D32Q96NH3 1257 aa19.3■□□□□ 0.68
SNX20-204ENST00000568993 HDAC5Q9UQL6 1122 aa19.3■□□□□ 0.68
SNX20-204ENST00000568993 TNS2Q63HR2 1409 aa19.29■□□□□ 0.68
SNX20-204ENST00000568993 KCPQ6ZWJ8 1503 aa19.29■□□□□ 0.68
SNX20-204ENST00000568993 TOM1O60784 492 aa19.29■□□□□ 0.68
SNX20-204ENST00000568993 UTYO14607 1347 aa19.29■□□□□ 0.68
SNX20-204ENST00000568993 TOGARAM1Q9Y4F4 1720 aa19.29■□□□□ 0.68
SNX20-204ENST00000568993 C16orf71Q8IYS4 520 aaPredicted RBP19.29■□□□□ 0.68
SNX20-204ENST00000568993 MTX1Q13505 466 aa19.28■□□□□ 0.68
SNX20-204ENST00000568993 OSBPL3Q9H4L5 887 aa19.28■□□□□ 0.68
SNX20-204ENST00000568993 SMARCA5O60264 1052 aaPredicted RBP19.27■□□□□ 0.68
SNX20-204ENST00000568993 TTC22Q5TAA0 569 aa19.27■□□□□ 0.68
SNX20-204ENST00000568993 PPP1R42Q7Z4L9 355 aa19.27■□□□□ 0.68
SNX20-204ENST00000568993 XAGE3Q8WTP9 111 aa19.27■□□□□ 0.68
SNX20-204ENST00000568993 UBE2Q2Q8WVN8 375 aa19.27■□□□□ 0.68
SNX20-204ENST00000568993 USP35Q9P2H5 1018 aa19.27■□□□□ 0.68
SNX20-204ENST00000568993 AIMP1Q12904 312 aaKnown RBP19.27■□□□□ 0.67
SNX20-204ENST00000568993 COPS6Q7L5N1 327 aa19.27■□□□□ 0.67
SNX20-204ENST00000568993 LRRCC1Q9C099 1032 aa19.27■□□□□ 0.67
SNX20-204ENST00000568993 EXOC6BQ9Y2D4 811 aa19.27■□□□□ 0.67
SNX20-204ENST00000568993 MYL6BP14649 208 aa19.26■□□□□ 0.67
SNX20-204ENST00000568993 GSPT1P15170 499 aaKnown RBP19.26■□□□□ 0.67
SNX20-204ENST00000568993 RIC3Q7Z5B4 369 aa19.26■□□□□ 0.67
SNX20-204ENST00000568993 WNK3Q9BYP7 1800 aa19.26■□□□□ 0.67
SNX20-204ENST00000568993 RAB11FIP3O75154 756 aa19.25■□□□□ 0.67
SNX20-204ENST00000568993 METTL22Q9BUU2 404 aaPredicted RBP19.25■□□□□ 0.67
SNX20-204ENST00000568993 C9orf78Q9NZ63 289 aaPredicted RBP19.25■□□□□ 0.67
SNX20-204ENST00000568993 SALL3Q9BXA9 1300 aa19.25■□□□□ 0.67
SNX20-204ENST00000568993 CWF19L2Q2TBE0 894 aaKnown RBP19.25■□□□□ 0.67
SNX20-204ENST00000568993 ANKRD13DQ6ZTN6 518 aa19.25■□□□□ 0.67
SNX20-204ENST00000568993 OTUD7AQ8TE49 926 aaPredicted RBP19.25■□□□□ 0.67
SNX20-204ENST00000568993 LRP6O75581 1613 aa19.25■□□□□ 0.67
SNX20-204ENST00000568993 NRAPQ86VF7 1730 aa19.24■□□□□ 0.67
SNX20-204ENST00000568993 APBB1O00213 710 aa19.24■□□□□ 0.67
SNX20-204ENST00000568993 GRM8O00222 908 aa19.24■□□□□ 0.67
SNX20-204ENST00000568993 IGKV5-2P06315 115 aa19.24■□□□□ 0.67
SNX20-204ENST00000568993 NEXNQ0ZGT2 675 aa19.24■□□□□ 0.67
SNX20-204ENST00000568993 TMOD3Q9NYL9 352 aa19.24■□□□□ 0.67
SNX20-204ENST00000568993 SRGAP3O43295 1099 aa19.23■□□□□ 0.67
SNX20-204ENST00000568993 CDCA7Q9BWT1 371 aaPredicted RBP19.23■□□□□ 0.67
SNX20-204ENST00000568993 ITGB4P16144 1822 aa19.22■□□□□ 0.67
SNX20-204ENST00000568993 CDC45O75419 566 aa19.22■□□□□ 0.67
SNX20-204ENST00000568993 C22orf23Q9BZE7 217 aa19.22■□□□□ 0.67
SNX20-204ENST00000568993 THRAP3Q9Y2W1 955 aaKnown RBP19.22■□□□□ 0.67
SNX20-204ENST00000568993 NEURL1BA8MQ27 555 aa19.22■□□□□ 0.67
SNX20-204ENST00000568993 NBPF26B4DH59 902 aa19.22■□□□□ 0.67
SNX20-204ENST00000568993 PDE1AP54750 535 aa19.22■□□□□ 0.67
SNX20-204ENST00000568993 MFAP1P55081 439 aaKnown RBP19.22■□□□□ 0.67
SNX20-204ENST00000568993 NBPF14Q5TI25 921 aa19.22■□□□□ 0.67
SNX20-204ENST00000568993 NBPF10Q6P3W6 841 aaKnown RBP19.22■□□□□ 0.67
SNX20-204ENST00000568993 TBC1D9Q6ZT07 1266 aa19.22■□□□□ 0.67
SNX20-204ENST00000568993 NBPF15Q8N660 670 aa19.22■□□□□ 0.67
SNX20-204ENST00000568993 EXOC5O00471 708 aa19.21■□□□□ 0.67
SNX20-204ENST00000568993 ARFGEF2Q9Y6D5 1785 aa19.21■□□□□ 0.67
SNX20-204ENST00000568993 NWD2Q9ULI1 1742 aa19.21■□□□□ 0.67
SNX20-204ENST00000568993 HSP90AB4PQ58FF6 505 aa19.2■□□□□ 0.66
SNX20-204ENST00000568993 VSIG10Q8N0Z9 540 aa19.2■□□□□ 0.66
SNX20-204ENST00000568993 PLBD2Q8NHP8 589 aa19.2■□□□□ 0.66
SNX20-204ENST00000568993 PIGBQ92521 554 aa19.2■□□□□ 0.66
SNX20-204ENST00000568993 STAP2Q9UGK3 403 aa19.2■□□□□ 0.66
SNX20-204ENST00000568993 SPATA31A1Q5TZJ5 1347 aa19.2■□□□□ 0.66
SNX20-204ENST00000568993 SURF6O75683 361 aaKnown RBP19.2■□□□□ 0.66
SNX20-204ENST00000568993 GCKRQ14397 625 aa19.2■□□□□ 0.66
SNX20-204ENST00000568993 RBM25P49756 843 aaKnown RBP19.19■□□□□ 0.66
SNX20-204ENST00000568993 KAZALD1Q96I82 304 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms