RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SLC52A2Q9HAB3 445 aa16.14■□□□□ 0.17
GTF3C1-209ENST00000568569 GLTPD2A6NH11 291 aa16.13■□□□□ 0.17
GTF3C1-209ENST00000568569 NARFQ9UHQ1 456 aa16.13■□□□□ 0.17
GTF3C1-209ENST00000568569 ADAMTS7Q9UKP4 1686 aa16.12■□□□□ 0.17
GTF3C1-209ENST00000568569 CAPN15O75808 1086 aa16.12■□□□□ 0.17
GTF3C1-209ENST00000568569 CYP19A1P11511 503 aaPredicted RBP16.12■□□□□ 0.17
GTF3C1-209ENST00000568569 TTLL6Q8N841 843 aa16.12■□□□□ 0.17
GTF3C1-209ENST00000568569 COL15A1P39059 1388 aa16.12■□□□□ 0.17
GTF3C1-209ENST00000568569 IL13P35225 146 aa16.11■□□□□ 0.17
GTF3C1-209ENST00000568569 ZBTB1Q9Y2K1 713 aa16.11■□□□□ 0.17
GTF3C1-209ENST00000568569 SERPINB2P05120 415 aa16.1■□□□□ 0.17
GTF3C1-209ENST00000568569 PRELPP51888 382 aa16.1■□□□□ 0.17
GTF3C1-209ENST00000568569 MRC1P22897 1456 aa16.1■□□□□ 0.17
GTF3C1-209ENST00000568569 H0YIN7 160 aa16.09■□□□□ 0.17
GTF3C1-209ENST00000568569 HSPA1AP0DMV8 641 aaKnown RBP16.09■□□□□ 0.17
GTF3C1-209ENST00000568569 HSPA1BP0DMV9 641 aaKnown RBP16.09■□□□□ 0.17
GTF3C1-209ENST00000568569 SLC39A6Q13433 755 aa16.09■□□□□ 0.17
GTF3C1-209ENST00000568569 C2CD5Q86YS7 1000 aa16.09■□□□□ 0.17
GTF3C1-209ENST00000568569 BCL2L12Q9HB09 334 aa16.09■□□□□ 0.17
GTF3C1-209ENST00000568569 LGR6Q9HBX8 967 aa16.09■□□□□ 0.17
GTF3C1-209ENST00000568569 SBF1O95248 1867 aa16.09■□□□□ 0.17
GTF3C1-209ENST00000568569 NFKBIEO00221 500 aa16.08■□□□□ 0.16
GTF3C1-209ENST00000568569 RNMTO43148 476 aaKnown RBP16.08■□□□□ 0.16
GTF3C1-209ENST00000568569 EIF4G2P78344 907 aaKnown RBP eCLIP16.08■□□□□ 0.16
GTF3C1-209ENST00000568569 VSIG10Q8N0Z9 540 aa16.07■□□□□ 0.16
GTF3C1-209ENST00000568569 KNSTRNQ9Y448 316 aa16.07■□□□□ 0.16
GTF3C1-209ENST00000568569 SCN11AQ9UI33 1791 aa16.07■□□□□ 0.16
GTF3C1-209ENST00000568569 NRXN2Q9P2S2 1712 aa16.06■□□□□ 0.16
GTF3C1-209ENST00000568569 CARMIL3Q8ND23 1372 aa16.06■□□□□ 0.16
GTF3C1-209ENST00000568569 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
GTF3C1-209ENST00000568569 DPY19L2Q6NUT2 758 aa16.06■□□□□ 0.16
GTF3C1-209ENST00000568569 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
GTF3C1-209ENST00000568569 STARD3NLO95772 234 aa16.05■□□□□ 0.16
GTF3C1-209ENST00000568569 HSPA5P11021 654 aaKnown RBP16.05■□□□□ 0.16
GTF3C1-209ENST00000568569 BICDL1Q6ZP65 573 aa16.05■□□□□ 0.16
GTF3C1-209ENST00000568569 PDZRN3Q9UPQ7 1066 aa16.05■□□□□ 0.16
GTF3C1-209ENST00000568569 HMOX1P09601 288 aa16.04■□□□□ 0.16
GTF3C1-209ENST00000568569 CANXP27824 592 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-209ENST00000568569 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
GTF3C1-209ENST00000568569 A0A087WZG4 1122 aa16.03■□□□□ 0.16
GTF3C1-209ENST00000568569 POTECB2RU33 542 aa16.03■□□□□ 0.16
GTF3C1-209ENST00000568569 EIF5P55010 431 aaKnown RBP16.03■□□□□ 0.16
GTF3C1-209ENST00000568569 ERFEQ4G0M1 354 aa16.03■□□□□ 0.16
GTF3C1-209ENST00000568569 ZNF622Q969S3 477 aaKnown RBP eCLIP16.03■□□□□ 0.162e-7■■■■□ 24.1
GTF3C1-209ENST00000568569 DLEC1Q9Y238 1755 aa16.03■□□□□ 0.16
GTF3C1-209ENST00000568569 PDE6BP35913 854 aa16.02■□□□□ 0.16
GTF3C1-209ENST00000568569 MTHFSDQ2M296 383 aaKnown RBP16.02■□□□□ 0.16
GTF3C1-209ENST00000568569 TTC5Q8N0Z6 440 aa16.02■□□□□ 0.16
GTF3C1-209ENST00000568569 BRIP1Q9BX63 1249 aa16.02■□□□□ 0.16
GTF3C1-209ENST00000568569 TIAM2Q8IVF5 1701 aa16.02■□□□□ 0.15
GTF3C1-209ENST00000568569 C21orf2O43822 256 aa16.01■□□□□ 0.15
GTF3C1-209ENST00000568569 AMER1Q5JTC6 1135 aaPredicted RBP16.01■□□□□ 0.15
GTF3C1-209ENST00000568569 TBC1D9BQ66K14 1250 aa16.01■□□□□ 0.15
GTF3C1-209ENST00000568569 CREBZFQ9NS37 354 aa16.01■□□□□ 0.15
GTF3C1-209ENST00000568569 LTBP3Q9NS15 1303 aa16■□□□□ 0.15
GTF3C1-209ENST00000568569 PRR5LQ6MZQ0 368 aa16■□□□□ 0.15
GTF3C1-209ENST00000568569 TAOK3Q9H2K8 898 aa16■□□□□ 0.15
GTF3C1-209ENST00000568569 CHADLQ6NUI6 762 aa15.99■□□□□ 0.15
GTF3C1-209ENST00000568569 TEX13AQ9BXU3 409 aaPredicted RBP15.99■□□□□ 0.15
GTF3C1-209ENST00000568569 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
GTF3C1-209ENST00000568569 ZNF496Q96IT1 587 aaPredicted RBP15.98■□□□□ 0.15
GTF3C1-209ENST00000568569 MKRN1Q9UHC7 482 aaKnown RBP15.98■□□□□ 0.15
GTF3C1-209ENST00000568569 ZNF330Q9Y3S2 320 aaPredicted RBP15.98■□□□□ 0.15
GTF3C1-209ENST00000568569 HEG1Q9ULI3 1381 aa15.98■□□□□ 0.15
GTF3C1-209ENST00000568569 NPHP1O15259 732 aa15.97■□□□□ 0.15
GTF3C1-209ENST00000568569 DIAPH1O60610 1272 aaKnown RBP15.97■□□□□ 0.15
GTF3C1-209ENST00000568569 IL6STP40189 918 aaPredicted RBP15.97■□□□□ 0.15
GTF3C1-209ENST00000568569 SOGA3Q5TF21 947 aa15.97■□□□□ 0.15
GTF3C1-209ENST00000568569 ZNF790Q6PG37 636 aa15.97■□□□□ 0.15
GTF3C1-209ENST00000568569 NPM2Q86SE8 214 aaKnown RBP15.97■□□□□ 0.15
GTF3C1-209ENST00000568569 CCDC24Q8N4L8 307 aa15.97■□□□□ 0.15
GTF3C1-209ENST00000568569 CNBD1Q8NA66 436 aa15.97■□□□□ 0.15
GTF3C1-209ENST00000568569 CNKSR1Q969H4 720 aa15.97■□□□□ 0.15
GTF3C1-209ENST00000568569 TBC1D2BQ9UPU7 963 aa15.97■□□□□ 0.15
GTF3C1-209ENST00000568569 IQCA1LA6NCM1 817 aa15.96■□□□□ 0.15
GTF3C1-209ENST00000568569 DDNO94850 711 aaPredicted RBP15.96■□□□□ 0.15
GTF3C1-209ENST00000568569 TEFQ10587 303 aa15.96■□□□□ 0.15
GTF3C1-209ENST00000568569 STYK1Q6J9G0 422 aa15.96■□□□□ 0.15
GTF3C1-209ENST00000568569 PRPF40BQ6NWY9 871 aaKnown RBP15.96■□□□□ 0.15
GTF3C1-209ENST00000568569 SETDB2Q96T68 719 aa15.96■□□□□ 0.15
GTF3C1-209ENST00000568569 UBR2Q8IWV8 1755 aa15.95■□□□□ 0.14
GTF3C1-209ENST00000568569 POTEIP0CG38 1075 aa15.95■□□□□ 0.14
GTF3C1-209ENST00000568569 POTEJP0CG39 1038 aa15.95■□□□□ 0.14
GTF3C1-209ENST00000568569 ST5P78524 1137 aa15.95■□□□□ 0.14
GTF3C1-209ENST00000568569 SCN7AQ01118 1682 aa15.95■□□□□ 0.14
GTF3C1-209ENST00000568569 SRGNP10124 158 aa15.94■□□□□ 0.14
GTF3C1-209ENST00000568569 LDHDQ86WU2 507 aa15.94■□□□□ 0.14
GTF3C1-209ENST00000568569 GAS2L2Q8NHY3 880 aa15.94■□□□□ 0.14
GTF3C1-209ENST00000568569 FMNL2Q96PY5 1086 aa15.94■□□□□ 0.14
GTF3C1-209ENST00000568569 CNTNAP1P78357 1384 aa15.94■□□□□ 0.14
GTF3C1-209ENST00000568569 ANKRD31Q8N7Z5 1873 aa15.93■□□□□ 0.14
GTF3C1-209ENST00000568569 GNAT3A8MTJ3 354 aa15.93■□□□□ 0.14
GTF3C1-209ENST00000568569 CAMTA2O94983 1202 aa15.93■□□□□ 0.14
GTF3C1-209ENST00000568569 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
GTF3C1-209ENST00000568569 MASTLQ96GX5 879 aa15.93■□□□□ 0.14
GTF3C1-209ENST00000568569 PCGF6Q9BYE7 350 aa15.93■□□□□ 0.14
GTF3C1-209ENST00000568569 COL11A2P13942 1736 aaPredicted RBP15.93■□□□□ 0.14
GTF3C1-209ENST00000568569 FER1L6Q2WGJ9 1857 aa15.93■□□□□ 0.14
GTF3C1-209ENST00000568569 CCDC88AQ3V6T2 1871 aa15.93■□□□□ 0.14
GTF3C1-209ENST00000568569 FOXN1O15353 648 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms