RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 RNMTO43148 476 aaKnown RBP20.39■□□□□ 0.85
COMMD4-223ENST00000568301 DNAJC10Q8IXB1 793 aa20.39■□□□□ 0.85
COMMD4-223ENST00000568301 RRAGCQ9HB90 399 aa20.39■□□□□ 0.85
COMMD4-223ENST00000568301 DIAPH1O60610 1272 aaKnown RBP20.38■□□□□ 0.85
COMMD4-223ENST00000568301 HMOX1P09601 288 aa20.38■□□□□ 0.85
COMMD4-223ENST00000568301 USPL1Q5W0Q7 1092 aa20.38■□□□□ 0.85
COMMD4-223ENST00000568301 ZPR1O75312 459 aa20.37■□□□□ 0.85
COMMD4-223ENST00000568301 FSTL1Q12841 308 aa20.37■□□□□ 0.85
COMMD4-223ENST00000568301 MRC1P22897 1456 aa20.37■□□□□ 0.85
COMMD4-223ENST00000568301 SOS1Q07889 1333 aaPredicted RBP20.36■□□□□ 0.85
COMMD4-223ENST00000568301 CYP19A1P11511 503 aaPredicted RBP20.36■□□□□ 0.85
COMMD4-223ENST00000568301 MTHFSDQ2M296 383 aaKnown RBP20.36■□□□□ 0.85
COMMD4-223ENST00000568301 KLRG1Q96E93 195 aa20.36■□□□□ 0.85
COMMD4-223ENST00000568301 RASSF7Q02833 373 aa20.35■□□□□ 0.85
COMMD4-223ENST00000568301 SLC39A6Q13433 755 aa20.35■□□□□ 0.85
COMMD4-223ENST00000568301 CC2D1BQ5T0F9 858 aaKnown RBP20.35■□□□□ 0.85
COMMD4-223ENST00000568301 AFDNP55196 1824 aaKnown RBP20.34■□□□□ 0.85
COMMD4-223ENST00000568301 NFIXQ14938 502 aa20.34■□□□□ 0.85
COMMD4-223ENST00000568301 VSIG10Q8N0Z9 540 aa20.34■□□□□ 0.85
COMMD4-223ENST00000568301 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
COMMD4-223ENST00000568301 JMYQ8N9B5 988 aa20.33■□□□□ 0.85
COMMD4-223ENST00000568301 TNRC6CQ9HCJ0 1690 aaKnown RBP20.32■□□□□ 0.84
COMMD4-223ENST00000568301 NARFQ9UHQ1 456 aa20.32■□□□□ 0.84
COMMD4-223ENST00000568301 PRELPP51888 382 aa20.31■□□□□ 0.84
COMMD4-223ENST00000568301 COL13A1Q5TAT6 717 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-223ENST00000568301 BCL2L12Q9HB09 334 aa20.31■□□□□ 0.84
COMMD4-223ENST00000568301 ZBTB1Q9Y2K1 713 aa20.31■□□□□ 0.84
COMMD4-223ENST00000568301 COL15A1P39059 1388 aa20.3■□□□□ 0.84
COMMD4-223ENST00000568301 NRXN2Q9P2S2 1712 aa20.3■□□□□ 0.84
COMMD4-223ENST00000568301 UBR2Q8IWV8 1755 aa20.29■□□□□ 0.84
COMMD4-223ENST00000568301 SERPINB2P05120 415 aa20.29■□□□□ 0.84
COMMD4-223ENST00000568301 SMC1BQ8NDV3 1235 aa20.29■□□□□ 0.84
COMMD4-223ENST00000568301 LMNB1P20700 586 aa20.28■□□□□ 0.84
COMMD4-223ENST00000568301 CCDC88AQ3V6T2 1871 aa20.27■□□□□ 0.84
COMMD4-223ENST00000568301 DLEC1Q9Y238 1755 aa20.27■□□□□ 0.84
COMMD4-223ENST00000568301 STARD3NLO95772 234 aa20.27■□□□□ 0.84
COMMD4-223ENST00000568301 TTC5Q8N0Z6 440 aa20.27■□□□□ 0.84
COMMD4-223ENST00000568301 TTLL6Q8N841 843 aa20.27■□□□□ 0.84
COMMD4-223ENST00000568301 ZC3H4Q9UPT8 1303 aaKnown RBP20.27■□□□□ 0.83
COMMD4-223ENST00000568301 COL3A1P02461 1466 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-223ENST00000568301 GLTPD2A6NH11 291 aa20.26■□□□□ 0.83
COMMD4-223ENST00000568301 GNAT3A8MTJ3 354 aa20.26■□□□□ 0.83
COMMD4-223ENST00000568301 U2SURPO15042 1029 aaKnown RBP20.26■□□□□ 0.83
COMMD4-223ENST00000568301 C2CD5Q86YS7 1000 aa20.26■□□□□ 0.83
COMMD4-223ENST00000568301 GAS2L2Q8NHY3 880 aa20.26■□□□□ 0.83
COMMD4-223ENST00000568301 CARMIL3Q8ND23 1372 aa20.25■□□□□ 0.83
COMMD4-223ENST00000568301 CANXP27824 592 aaKnown RBP20.25■□□□□ 0.83
COMMD4-223ENST00000568301 TEFQ10587 303 aa20.25■□□□□ 0.83
COMMD4-223ENST00000568301 IL17REQ8NFR9 667 aa20.25■□□□□ 0.83
COMMD4-223ENST00000568301 TEX13AQ9BXU3 409 aaPredicted RBP20.25■□□□□ 0.83
COMMD4-223ENST00000568301 A0A087WZG4 1122 aa20.24■□□□□ 0.83
COMMD4-223ENST00000568301 VEGFAP15692 232 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-223ENST00000568301 EIF5P55010 431 aaKnown RBP20.24■□□□□ 0.83
COMMD4-223ENST00000568301 ZNF790Q6PG37 636 aa20.24■□□□□ 0.83
COMMD4-223ENST00000568301 BICDL1Q6ZP65 573 aa20.24■□□□□ 0.83
COMMD4-223ENST00000568301 H0YIN7 160 aa20.23■□□□□ 0.83
COMMD4-223ENST00000568301 NFKBIEO00221 500 aa20.23■□□□□ 0.83
COMMD4-223ENST00000568301 ZNF496Q96IT1 587 aaPredicted RBP20.23■□□□□ 0.83
COMMD4-223ENST00000568301 TIAM2Q8IVF5 1701 aa20.22■□□□□ 0.83
COMMD4-223ENST00000568301 SIPA1L3O60292 1781 aaPredicted RBP20.22■□□□□ 0.83
COMMD4-223ENST00000568301 HEG1Q9ULI3 1381 aa20.21■□□□□ 0.83
COMMD4-223ENST00000568301 POTECB2RU33 542 aa20.2■□□□□ 0.82
COMMD4-223ENST00000568301 CNGB1Q14028 1251 aaPredicted RBP20.2■□□□□ 0.82
COMMD4-223ENST00000568301 TBC1D9BQ66K14 1250 aa20.2■□□□□ 0.82
COMMD4-223ENST00000568301 ANKRD31Q8N7Z5 1873 aa20.2■□□□□ 0.82
COMMD4-223ENST00000568301 CAPN15O75808 1086 aa20.19■□□□□ 0.82
COMMD4-223ENST00000568301 CCDC24Q8N4L8 307 aa20.19■□□□□ 0.82
COMMD4-223ENST00000568301 ZNF622Q969S3 477 aaKnown RBP eCLIP20.19■□□□□ 0.82
COMMD4-223ENST00000568301 CFAP53Q96M91 514 aa20.19■□□□□ 0.82
COMMD4-223ENST00000568301 CEMIPQ8WUJ3 1361 aa20.19■□□□□ 0.82
COMMD4-223ENST00000568301 IL6STP40189 918 aaPredicted RBP20.18■□□□□ 0.82
COMMD4-223ENST00000568301 PHACTR3Q96KR7 559 aa20.18■□□□□ 0.82
COMMD4-223ENST00000568301 FMNL2Q96PY5 1086 aa20.18■□□□□ 0.82
COMMD4-223ENST00000568301 ZNF219Q9P2Y4 722 aaPredicted RBP20.18■□□□□ 0.82
COMMD4-223ENST00000568301 C21orf2O43822 256 aa20.17■□□□□ 0.82
COMMD4-223ENST00000568301 TNS4Q8IZW8 715 aa20.17■□□□□ 0.82
COMMD4-223ENST00000568301 PDZRN3Q9UPQ7 1066 aa20.17■□□□□ 0.82
COMMD4-223ENST00000568301 TBC1D2BQ9UPU7 963 aa20.17■□□□□ 0.82
COMMD4-223ENST00000568301 PRKAR2BP31323 418 aa20.16■□□□□ 0.82
COMMD4-223ENST00000568301 BRIP1Q9BX63 1249 aa20.16■□□□□ 0.82
COMMD4-223ENST00000568301 RSPH6AQ9H0K4 717 aa20.16■□□□□ 0.82
COMMD4-223ENST00000568301 NUDCQ9Y266 331 aa20.16■□□□□ 0.82
COMMD4-223ENST00000568301 BTBD11A6QL63 1104 aa20.15■□□□□ 0.82
COMMD4-223ENST00000568301 HSPA1AP0DMV8 641 aaKnown RBP20.15■□□□□ 0.82
COMMD4-223ENST00000568301 HSPA1BP0DMV9 641 aaKnown RBP20.15■□□□□ 0.82
COMMD4-223ENST00000568301 PDE6BP35913 854 aa20.15■□□□□ 0.82
COMMD4-223ENST00000568301 PRR5LQ6MZQ0 368 aa20.15■□□□□ 0.82
COMMD4-223ENST00000568301 DPY19L2Q6NUT2 758 aa20.15■□□□□ 0.82
COMMD4-223ENST00000568301 ZNF330Q9Y3S2 320 aaPredicted RBP20.15■□□□□ 0.82
COMMD4-223ENST00000568301 COL11A2P13942 1736 aaPredicted RBP20.15■□□□□ 0.82
COMMD4-223ENST00000568301 FER1L6Q2WGJ9 1857 aa20.15■□□□□ 0.82
COMMD4-223ENST00000568301 DICER1Q9UPY3 1922 aaKnown RBP20.14■□□□□ 0.81
COMMD4-223ENST00000568301 ERFEQ4G0M1 354 aa20.14■□□□□ 0.81
COMMD4-223ENST00000568301 NPM2Q86SE8 214 aaKnown RBP20.14■□□□□ 0.81
COMMD4-223ENST00000568301 SCN7AQ01118 1682 aa20.13■□□□□ 0.81
COMMD4-223ENST00000568301 A1BGP04217 495 aa20.13■□□□□ 0.81
COMMD4-223ENST00000568301 KCNQ3O43525 872 aa20.12■□□□□ 0.81
COMMD4-223ENST00000568301 SETDB2Q96T68 719 aa20.11■□□□□ 0.81
COMMD4-223ENST00000568301 SLX4Q8IY92 1834 aa20.11■□□□□ 0.81
COMMD4-223ENST00000568301 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms