RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 FAM43AQ8N2R8 423 aa28.9■■■□□ 2.22
LINC00543-201ENST00000567234 TBC1D32Q96NH3 1257 aa28.89■■■□□ 2.22
LINC00543-201ENST00000567234 ZNF790Q6PG37 636 aa28.88■■■□□ 2.21
LINC00543-201ENST00000567234 CYP27B1O15528 508 aa28.87■■■□□ 2.21
LINC00543-201ENST00000567234 DNAAF4Q8WXU2 420 aa28.87■■■□□ 2.21
LINC00543-201ENST00000567234 SRCIN1Q9C0H9 1055 aa28.87■■■□□ 2.21
LINC00543-201ENST00000567234 USP44Q9H0E7 712 aa28.87■■■□□ 2.21
LINC00543-201ENST00000567234 NRAPQ86VF7 1730 aa28.86■■■□□ 2.21
LINC00543-201ENST00000567234 ATP8B2P98198 1209 aa28.85■■■□□ 2.21
LINC00543-201ENST00000567234 HYPKQ9NX55 129 aa28.85■■■□□ 2.21
LINC00543-201ENST00000567234 LRP6O75581 1613 aa28.84■■■□□ 2.21
LINC00543-201ENST00000567234 PLEKHM2Q8IWE5 1019 aa28.84■■■□□ 2.21
LINC00543-201ENST00000567234 NFATC2IPQ8NCF5 419 aa28.84■■■□□ 2.21
LINC00543-201ENST00000567234 CARD10Q9BWT7 1032 aa28.84■■■□□ 2.21
LINC00543-201ENST00000567234 UBTFL1P0CB47 393 aaPredicted RBP28.83■■■□□ 2.21
LINC00543-201ENST00000567234 PI4KAP2A4QPH2 592 aa28.83■■■□□ 2.21
LINC00543-201ENST00000567234 BEND3Q5T5X7 828 aa28.83■■■□□ 2.21
LINC00543-201ENST00000567234 PI4KAP1Q8N8J0 262 aa28.83■■■□□ 2.21
LINC00543-201ENST00000567234 ADCY9O60503 1353 aa28.82■■■□□ 2.2
LINC00543-201ENST00000567234 DDX21Q9NR30 783 aaKnown RBP eCLIP28.82■■■□□ 2.2
LINC00543-201ENST00000567234 C5P01031 1676 aa28.81■■■□□ 2.2
LINC00543-201ENST00000567234 RTN4Q9NQC3 1192 aaKnown RBP28.81■■■□□ 2.2
LINC00543-201ENST00000567234 PCDH11XQ9BZA7 1347 aa28.81■■■□□ 2.2
LINC00543-201ENST00000567234 PCDH11YQ9BZA8 1340 aa28.81■■■□□ 2.2
LINC00543-201ENST00000567234 EIF5BO60841 1220 aaKnown RBP28.79■■■□□ 2.2
LINC00543-201ENST00000567234 KSR2Q6VAB6 950 aa28.79■■■□□ 2.2
LINC00543-201ENST00000567234 ZCRB1Q8TBF4 217 aaKnown RBP28.79■■■□□ 2.2
LINC00543-201ENST00000567234 LRRFIP2Q9Y608 721 aaKnown RBP28.79■■■□□ 2.2
LINC00543-201ENST00000567234 NWD2Q9ULI1 1742 aa28.78■■■□□ 2.2
LINC00543-201ENST00000567234 SLIT2O94813 1529 aa28.78■■■□□ 2.2
LINC00543-201ENST00000567234 ALDH1L1O75891 902 aa28.78■■■□□ 2.2
LINC00543-201ENST00000567234 SLC39A6Q13433 755 aa28.78■■■□□ 2.2
LINC00543-201ENST00000567234 BRPF3Q9ULD4 1205 aa28.78■■■□□ 2.2
LINC00543-201ENST00000567234 SPATA31A6Q5VVP1 1343 aa28.77■■■□□ 2.2
LINC00543-201ENST00000567234 ANXA1P04083 346 aa28.77■■■□□ 2.2
LINC00543-201ENST00000567234 C8orf37Q96NL8 207 aa28.77■■■□□ 2.2
LINC00543-201ENST00000567234 IBTKQ9P2D0 1353 aaPredicted RBP28.76■■■□□ 2.2
LINC00543-201ENST00000567234 PRAMEF22A3QJZ6 481 aa28.76■■■□□ 2.19
LINC00543-201ENST00000567234 DDX58O95786 925 aaKnown RBP28.76■■■□□ 2.19
LINC00543-201ENST00000567234 IL2RBP14784 551 aa28.76■■■□□ 2.19
LINC00543-201ENST00000567234 TTC22Q5TAA0 569 aa28.76■■■□□ 2.19
LINC00543-201ENST00000567234 TTC5Q8N0Z6 440 aa28.76■■■□□ 2.19
LINC00543-201ENST00000567234 C22orf23Q9BZE7 217 aa28.76■■■□□ 2.19
LINC00543-201ENST00000567234 CABP4P57796 275 aa28.76■■■□□ 2.19
LINC00543-201ENST00000567234 PROSER3Q2NL68 480 aa28.76■■■□□ 2.19
LINC00543-201ENST00000567234 PNMA6EA0A0J9YXQ4 647 aa28.75■■■□□ 2.19
LINC00543-201ENST00000567234 MFAP1P55081 439 aaKnown RBP28.75■■■□□ 2.19
LINC00543-201ENST00000567234 BECN1Q14457 450 aa28.75■■■□□ 2.19
LINC00543-201ENST00000567234 PDIA6Q15084 440 aa28.75■■■□□ 2.19
LINC00543-201ENST00000567234 NKX1-1Q15270 411 aaPredicted RBP28.75■■■□□ 2.19
LINC00543-201ENST00000567234 SSH3Q8TE77 659 aa28.75■■■□□ 2.19
LINC00543-201ENST00000567234 HDAC5Q9UQL6 1122 aa28.75■■■□□ 2.19
LINC00543-201ENST00000567234 SNRPA1P09661 255 aaKnown RBP28.74■■■□□ 2.19
LINC00543-201ENST00000567234 FMNL2Q96PY5 1086 aa28.74■■■□□ 2.19
LINC00543-201ENST00000567234 SHANK3Q9BYB0 1731 aa28.74■■■□□ 2.19
LINC00543-201ENST00000567234 ERVV-2B6SEH9 535 aa28.73■■■□□ 2.19
LINC00543-201ENST00000567234 ZNF496Q96IT1 587 aaPredicted RBP28.73■■■□□ 2.19
LINC00543-201ENST00000567234 OSBPL3Q9H4L5 887 aa28.73■■■□□ 2.19
LINC00543-201ENST00000567234 MAP3K2Q9Y2U5 619 aa28.73■■■□□ 2.19
LINC00543-201ENST00000567234 LAMB4A4D0S4 1761 aa28.73■■■□□ 2.19
LINC00543-201ENST00000567234 C16orf71Q8IYS4 520 aaPredicted RBP28.73■■■□□ 2.19
LINC00543-201ENST00000567234 CDC45O75419 566 aa28.72■■■□□ 2.19
LINC00543-201ENST00000567234 GSPT1P15170 499 aaKnown RBP28.72■■■□□ 2.19
LINC00543-201ENST00000567234 NGLY1Q96IV0 654 aa28.71■■■□□ 2.19
LINC00543-201ENST00000567234 LRRCC1Q9C099 1032 aa28.71■■■□□ 2.19
LINC00543-201ENST00000567234 WNK3Q9BYP7 1800 aa28.71■■■□□ 2.19
LINC00543-201ENST00000567234 SMARCA5O60264 1052 aaPredicted RBP28.71■■■□□ 2.19
LINC00543-201ENST00000567234 POLA2Q14181 598 aa28.71■■■□□ 2.19
LINC00543-201ENST00000567234 TBC1D9Q6ZT07 1266 aa28.7■■■□□ 2.18
LINC00543-201ENST00000567234 UBR2Q8IWV8 1755 aa28.69■■■□□ 2.18
LINC00543-201ENST00000567234 RBM25P49756 843 aaKnown RBP28.69■■■□□ 2.18
LINC00543-201ENST00000567234 LINS1Q8NG48 757 aa28.69■■■□□ 2.18
LINC00543-201ENST00000567234 EXOC6BQ9Y2D4 811 aa28.69■■■□□ 2.18
LINC00543-201ENST00000567234 NBPF7P0C2Y1 421 aaPredicted RBP28.69■■■□□ 2.18
LINC00543-201ENST00000567234 BCL9LQ86UU0 1499 aa28.69■■■□□ 2.18
LINC00543-201ENST00000567234 GLI3P10071 1580 aa28.68■■■□□ 2.18
LINC00543-201ENST00000567234 APBB1O00213 710 aa28.68■■■□□ 2.18
LINC00543-201ENST00000567234 RAB11FIP3O75154 756 aa28.68■■■□□ 2.18
LINC00543-201ENST00000567234 DISP2A7MBM2 1401 aa28.67■■■□□ 2.18
LINC00543-201ENST00000567234 OTUD7AQ8TE49 926 aaPredicted RBP28.67■■■□□ 2.18
LINC00543-201ENST00000567234 PAPPAQ13219 1627 aa28.67■■■□□ 2.18
LINC00543-201ENST00000567234 SLC4A3P48751 1232 aa28.66■■■□□ 2.18
LINC00543-201ENST00000567234 MTX1Q13505 466 aa28.66■■■□□ 2.18
LINC00543-201ENST00000567234 PPP1R42Q7Z4L9 355 aa28.66■■■□□ 2.18
LINC00543-201ENST00000567234 SPATA31A1Q5TZJ5 1347 aa28.66■■■□□ 2.18
LINC00543-201ENST00000567234 SALL3Q9BXA9 1300 aa28.66■■■□□ 2.18
LINC00543-201ENST00000567234 UTYO14607 1347 aa28.65■■■□□ 2.18
LINC00543-201ENST00000567234 ERBB4Q15303 1308 aa28.65■■■□□ 2.18
LINC00543-201ENST00000567234 PDE1AP54750 535 aa28.64■■■□□ 2.18
LINC00543-201ENST00000567234 UNC5CLQ8IV45 518 aa28.64■■■□□ 2.18
LINC00543-201ENST00000567234 C9orf78Q9NZ63 289 aaPredicted RBP28.64■■■□□ 2.17
LINC00543-201ENST00000567234 CCDC9Q9Y3X0 531 aaKnown RBP28.64■■■□□ 2.17
LINC00543-201ENST00000567234 USP16Q9Y5T5 823 aa28.64■■■□□ 2.17
LINC00543-201ENST00000567234 TUBGCP6Q96RT7 1819 aa28.63■■■□□ 2.17
LINC00543-201ENST00000567234 MEX3CQ5U5Q3 659 aaKnown RBP28.63■■■□□ 2.17
LINC00543-201ENST00000567234 LRP10Q7Z4F1 713 aa28.63■■■□□ 2.17
LINC00543-201ENST00000567234 FNBP4Q8N3X1 1017 aaPredicted RBP28.63■■■□□ 2.17
LINC00543-201ENST00000567234 SPATA31A5Q5VU36 1347 aa28.63■■■□□ 2.17
LINC00543-201ENST00000567234 SPATA31A7Q8IWB4 1347 aa28.63■■■□□ 2.17
LINC00543-201ENST00000567234 HSP90AB4PQ58FF6 505 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms