RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 PI4KAP2A4QPH2 592 aa13.46□□□□□ -0.25
PDXDC1-214ENST00000566633 MFAP1P55081 439 aaKnown RBP13.46□□□□□ -0.25
PDXDC1-214ENST00000566633 PI4KAP1Q8N8J0 262 aa13.46□□□□□ -0.25
PDXDC1-214ENST00000566633 TBC1D2Q9BYX2 928 aa13.46□□□□□ -0.25
PDXDC1-214ENST00000566633 JCADQ9P266 1359 aa13.46□□□□□ -0.25
PDXDC1-214ENST00000566633 HEG1Q9ULI3 1381 aa13.46□□□□□ -0.25
PDXDC1-214ENST00000566633 COL14A1Q05707 1796 aaKnown RBP13.46□□□□□ -0.25
PDXDC1-214ENST00000566633 HOXB7P09629 217 aa13.46□□□□□ -0.26
PDXDC1-214ENST00000566633 BMP2KLQ5H9B9 411 aa13.46□□□□□ -0.26
PDXDC1-214ENST00000566633 DBF4Q9UBU7 674 aaPredicted RBP13.46□□□□□ -0.26
PDXDC1-214ENST00000566633 FAM98CQ17RN3 349 aaKnown RBP13.45□□□□□ -0.26
PDXDC1-214ENST00000566633 ASAP1Q9ULH1 1129 aa13.45□□□□□ -0.26
PDXDC1-214ENST00000566633 ERVV-2B6SEH9 535 aa13.45□□□□□ -0.26
PDXDC1-214ENST00000566633 PDIA6Q15084 440 aa13.45□□□□□ -0.26
PDXDC1-214ENST00000566633 PIGBQ92521 554 aa13.45□□□□□ -0.26
PDXDC1-214ENST00000566633 FMNL2Q96PY5 1086 aa13.45□□□□□ -0.26
PDXDC1-214ENST00000566633 FRAT2O75474 233 aaPredicted RBP13.44□□□□□ -0.26
PDXDC1-214ENST00000566633 DDB1Q16531 1140 aa13.44□□□□□ -0.26
PDXDC1-214ENST00000566633 UNC5CLQ8IV45 518 aa13.44□□□□□ -0.26
PDXDC1-214ENST00000566633 ACSBG1Q96GR2 724 aa13.44□□□□□ -0.26
PDXDC1-214ENST00000566633 TMOD3Q9NYL9 352 aa13.44□□□□□ -0.26
PDXDC1-214ENST00000566633 SOS1Q07889 1333 aaPredicted RBP13.44□□□□□ -0.26
PDXDC1-214ENST00000566633 PKD1L3Q7Z443 1732 aa13.44□□□□□ -0.26
PDXDC1-214ENST00000566633 SNRPA1P09661 255 aaKnown RBP13.44□□□□□ -0.26
PDXDC1-214ENST00000566633 ANTXR1Q9H6X2 564 aa13.44□□□□□ -0.26
PDXDC1-214ENST00000566633 KDM3BQ7LBC6 1761 aa13.44□□□□□ -0.26
PDXDC1-214ENST00000566633 DCTPP1Q9H773 170 aa13.43□□□□□ -0.26
PDXDC1-214ENST00000566633 SPATA31A5Q5VU36 1347 aa13.43□□□□□ -0.26
PDXDC1-214ENST00000566633 SPATA31A7Q8IWB4 1347 aa13.43□□□□□ -0.26
PDXDC1-214ENST00000566633 DISP2A7MBM2 1401 aa13.43□□□□□ -0.26
PDXDC1-214ENST00000566633 PRIM1P49642 420 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-214ENST00000566633 SCN11AQ9UI33 1791 aa13.42□□□□□ -0.26
PDXDC1-214ENST00000566633 ADAMTS7Q9UKP4 1686 aa13.42□□□□□ -0.26
PDXDC1-214ENST00000566633 CCT4P50991 539 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-214ENST00000566633 MEX3CQ5U5Q3 659 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-214ENST00000566633 ANKRD44Q8N8A2 993 aa13.42□□□□□ -0.26
PDXDC1-214ENST00000566633 SLKQ9H2G2 1235 aaPredicted RBP13.42□□□□□ -0.26
PDXDC1-214ENST00000566633 USP21Q9UK80 565 aa13.42□□□□□ -0.26
PDXDC1-214ENST00000566633 MAP3K2Q9Y2U5 619 aa13.42□□□□□ -0.26
PDXDC1-214ENST00000566633 PARP4Q9UKK3 1724 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-214ENST00000566633 A1BGP04217 495 aa13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 RBM25P49756 843 aaKnown RBP13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 RPAP2Q8IXW5 612 aaPredicted RBP13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 MARCH10Q8NA82 808 aaPredicted RBP13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 DDX21Q9NR30 783 aaKnown RBP eCLIP13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 SLIT2O94813 1529 aa13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 PLEKHG2Q9H7P9 1386 aa13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 COPS6Q7L5N1 327 aa13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 XAGE3Q8WTP9 111 aa13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 DNAAF4Q8WXU2 420 aa13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 KAT6BQ8WYB5 2073 aa13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 LRP6O75581 1613 aa13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 ATP10DQ9P241 1426 aa13.41□□□□□ -0.26
PDXDC1-214ENST00000566633 GSE1Q14687 1217 aa13.4□□□□□ -0.26
PDXDC1-214ENST00000566633 CWF19L2Q2TBE0 894 aaKnown RBP13.4□□□□□ -0.26
PDXDC1-214ENST00000566633 FAM182BQ5T319 152 aa13.4□□□□□ -0.26
PDXDC1-214ENST00000566633 ATG3Q9NT62 314 aa13.4□□□□□ -0.26
PDXDC1-214ENST00000566633 SIPA1L3O60292 1781 aaPredicted RBP13.4□□□□□ -0.26
PDXDC1-214ENST00000566633 BCL9LQ86UU0 1499 aa13.4□□□□□ -0.26
PDXDC1-214ENST00000566633 CEP85Q6P2H3 762 aa13.4□□□□□ -0.26
PDXDC1-214ENST00000566633 USP44Q9H0E7 712 aa13.4□□□□□ -0.26
PDXDC1-214ENST00000566633 ZNF330Q9Y3S2 320 aaPredicted RBP13.4□□□□□ -0.26
PDXDC1-214ENST00000566633 ADCY9O60503 1353 aa13.4□□□□□ -0.26
PDXDC1-214ENST00000566633 PLCH1Q4KWH8 1693 aa13.4□□□□□ -0.27
PDXDC1-214ENST00000566633 APBB1O00213 710 aa13.39□□□□□ -0.27
PDXDC1-214ENST00000566633 HYPKQ9NX55 129 aa13.39□□□□□ -0.27
PDXDC1-214ENST00000566633 THRAP3Q9Y2W1 955 aaKnown RBP13.39□□□□□ -0.27
PDXDC1-214ENST00000566633 MRC1P22897 1456 aa13.39□□□□□ -0.27
PDXDC1-214ENST00000566633 NBPF7P0C2Y1 421 aaPredicted RBP13.39□□□□□ -0.27
PDXDC1-214ENST00000566633 BEND3Q5T5X7 828 aa13.39□□□□□ -0.27
PDXDC1-214ENST00000566633 FNBP4Q8N3X1 1017 aaPredicted RBP13.39□□□□□ -0.27
PDXDC1-214ENST00000566633 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
PDXDC1-214ENST00000566633 NBPF26B4DH59 902 aa13.38□□□□□ -0.27
PDXDC1-214ENST00000566633 NBPF14Q5TI25 921 aa13.38□□□□□ -0.27
PDXDC1-214ENST00000566633 NBPF10Q6P3W6 841 aaKnown RBP13.38□□□□□ -0.27
PDXDC1-214ENST00000566633 KSR2Q6VAB6 950 aa13.38□□□□□ -0.27
PDXDC1-214ENST00000566633 RIC3Q7Z5B4 369 aa13.38□□□□□ -0.27
PDXDC1-214ENST00000566633 PLEKHM2Q8IWE5 1019 aa13.38□□□□□ -0.27
PDXDC1-214ENST00000566633 NBPF15Q8N660 670 aa13.38□□□□□ -0.27
PDXDC1-214ENST00000566633 SHANK3Q9BYB0 1731 aa13.38□□□□□ -0.27
PDXDC1-214ENST00000566633 SPATA31A6Q5VVP1 1343 aa13.38□□□□□ -0.27
PDXDC1-214ENST00000566633 KCNQ2O43526 872 aa13.38□□□□□ -0.27
PDXDC1-214ENST00000566633 CHMP4AQ9BY43 222 aa13.38□□□□□ -0.27
PDXDC1-214ENST00000566633 TBC1D9Q6ZT07 1266 aa13.37□□□□□ -0.27
PDXDC1-214ENST00000566633 LRP10Q7Z4F1 713 aa13.37□□□□□ -0.27
PDXDC1-214ENST00000566633 DNAJC10Q8IXB1 793 aa13.37□□□□□ -0.27
PDXDC1-214ENST00000566633 LRRFIP2Q9Y608 721 aaKnown RBP13.37□□□□□ -0.27
PDXDC1-214ENST00000566633 VPS72Q15906 364 aa13.37□□□□□ -0.27
PDXDC1-214ENST00000566633 SLC4A9Q96Q91 983 aa13.37□□□□□ -0.27
PDXDC1-214ENST00000566633 GNAI2P04899 355 aa13.36□□□□□ -0.27
PDXDC1-214ENST00000566633 BARGINQ6ZT62 677 aa13.36□□□□□ -0.27
PDXDC1-214ENST00000566633 JARID2Q92833 1246 aaPredicted RBP13.36□□□□□ -0.27
PDXDC1-214ENST00000566633 ARXQ96QS3 562 aa13.36□□□□□ -0.27
PDXDC1-214ENST00000566633 CDCA7Q9BWT1 371 aaPredicted RBP13.36□□□□□ -0.27
PDXDC1-214ENST00000566633 GSPT1P15170 499 aaKnown RBP13.36□□□□□ -0.27
PDXDC1-214ENST00000566633 C16orf71Q8IYS4 520 aaPredicted RBP13.36□□□□□ -0.27
PDXDC1-214ENST00000566633 PNMA6EA0A0J9YXQ4 647 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 UBTFL1P0CB47 393 aaPredicted RBP13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 TTLL7Q6ZT98 887 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms