RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 A0A0G2JLW4 131 aa26.92■■□□□ 1.9
CLN6-207ENST00000566347 USPL1Q5W0Q7 1092 aa26.92■■□□□ 1.9
CLN6-207ENST00000566347 ZNF496Q96IT1 587 aaPredicted RBP26.92■■□□□ 1.9
CLN6-207ENST00000566347 NARFQ9UHQ1 456 aa26.92■■□□□ 1.9
CLN6-207ENST00000566347 HEG1Q9ULI3 1381 aa26.92■■□□□ 1.9
CLN6-207ENST00000566347 DDR1Q08345 913 aa26.91■■□□□ 1.9
CLN6-207ENST00000566347 DPEP1P16444 411 aa26.9■■□□□ 1.9
CLN6-207ENST00000566347 TM4SF1P30408 202 aa26.9■■□□□ 1.9
CLN6-207ENST00000566347 GIGYF1O75420 1035 aaPredicted RBP26.89■■□□□ 1.9
CLN6-207ENST00000566347 RTF1Q92541 710 aaKnown RBP26.89■■□□□ 1.9
CLN6-207ENST00000566347 FMNL2Q96PY5 1086 aa26.89■■□□□ 1.9
CLN6-207ENST00000566347 ATP10DQ9P241 1426 aa26.89■■□□□ 1.89
CLN6-207ENST00000566347 BTBD11A6QL63 1104 aa26.88■■□□□ 1.89
CLN6-207ENST00000566347 POLRMTO00411 1230 aaKnown RBP26.88■■□□□ 1.89
CLN6-207ENST00000566347 CANXP27824 592 aaKnown RBP26.88■■□□□ 1.89
CLN6-207ENST00000566347 BCS1LQ9Y276 419 aa26.88■■□□□ 1.89
CLN6-207ENST00000566347 ADCY9O60503 1353 aa26.87■■□□□ 1.89
CLN6-207ENST00000566347 A0A087WZG4 1122 aa26.87■■□□□ 1.89
CLN6-207ENST00000566347 BRCA1P38398 1863 aaKnown RBP26.87■■□□□ 1.89
CLN6-207ENST00000566347 EIF5P55010 431 aaKnown RBP26.86■■□□□ 1.89
CLN6-207ENST00000566347 C1QTNF8P60827 252 aa26.86■■□□□ 1.89
CLN6-207ENST00000566347 HTATSF1O43719 755 aaKnown RBP26.85■■□□□ 1.89
CLN6-207ENST00000566347 NEFMP07197 916 aa26.84■■□□□ 1.89
CLN6-207ENST00000566347 KCNA3P22001 575 aa26.83■■□□□ 1.89
CLN6-207ENST00000566347 NFIXQ14938 502 aa26.83■■□□□ 1.89
CLN6-207ENST00000566347 MCM10Q7L590 875 aa26.83■■□□□ 1.89
CLN6-207ENST00000566347 PIM2Q9P1W9 311 aa26.83■■□□□ 1.89
CLN6-207ENST00000566347 BCL2L12Q9HB09 334 aa26.82■■□□□ 1.88
CLN6-207ENST00000566347 KCNQ3O43525 872 aa26.81■■□□□ 1.88
CLN6-207ENST00000566347 IL6STP40189 918 aaPredicted RBP26.81■■□□□ 1.88
CLN6-207ENST00000566347 AFDNP55196 1824 aaKnown RBP26.81■■□□□ 1.88
CLN6-207ENST00000566347 ARFGEF1Q9Y6D6 1849 aa26.81■■□□□ 1.88
CLN6-207ENST00000566347 NRXN2Q9P2S2 1712 aa26.8■■□□□ 1.88
CLN6-207ENST00000566347 NPM2Q86SE8 214 aaKnown RBP26.8■■□□□ 1.88
CLN6-207ENST00000566347 GPBP1L1Q9HC44 474 aaPredicted RBP26.8■■□□□ 1.88
CLN6-207ENST00000566347 DALRD3Q5D0E6 543 aaKnown RBP26.79■■□□□ 1.88
CLN6-207ENST00000566347 SERPINB2P05120 415 aa26.78■■□□□ 1.88
CLN6-207ENST00000566347 ARHGAP27Q6ZUM4 889 aa26.78■■□□□ 1.88
CLN6-207ENST00000566347 ZNF330Q9Y3S2 320 aaPredicted RBP26.78■■□□□ 1.88
CLN6-207ENST00000566347 SCN7AQ01118 1682 aa26.77■■□□□ 1.88
CLN6-207ENST00000566347 DCTN1Q14203 1278 aa26.77■■□□□ 1.88
CLN6-207ENST00000566347 PNNQ9H307 717 aaKnown RBP26.77■■□□□ 1.88
CLN6-207ENST00000566347 A1BGP04217 495 aa26.76■■□□□ 1.87
CLN6-207ENST00000566347 SNRPA1P09661 255 aaKnown RBP26.76■■□□□ 1.87
CLN6-207ENST00000566347 CHRNA5P30532 468 aa26.76■■□□□ 1.87
CLN6-207ENST00000566347 RALBP1Q15311 655 aa26.76■■□□□ 1.87
CLN6-207ENST00000566347 TAF7Q15545 349 aaPredicted RBP26.75■■□□□ 1.87
CLN6-207ENST00000566347 ZNF526Q8TF50 670 aaPredicted RBP26.74■■□□□ 1.87
CLN6-207ENST00000566347 TBC1D2BQ9UPU7 963 aa26.74■■□□□ 1.87
CLN6-207ENST00000566347 DLG5Q8TDM6 1919 aa26.73■■□□□ 1.87
CLN6-207ENST00000566347 BICDL1Q6ZP65 573 aa26.73■■□□□ 1.87
CLN6-207ENST00000566347 PLEKHF1Q96S99 279 aa26.73■■□□□ 1.87
CLN6-207ENST00000566347 USP16Q9Y5T5 823 aa26.73■■□□□ 1.87
CLN6-207ENST00000566347 TBC1D9BQ66K14 1250 aa26.72■■□□□ 1.87
CLN6-207ENST00000566347 MAPK8IP3Q9UPT6 1336 aa26.71■■□□□ 1.87
CLN6-207ENST00000566347 SENP3-EIF4A1A0A087X0R7 540 aa26.71■■□□□ 1.87
CLN6-207ENST00000566347 NFE2L2Q16236 605 aa26.71■■□□□ 1.87
CLN6-207ENST00000566347 CARMIL3Q8ND23 1372 aa26.71■■□□□ 1.87
CLN6-207ENST00000566347 PNISRQ8TF01 805 aaKnown RBP26.7■■□□□ 1.86
CLN6-207ENST00000566347 DLEC1Q9Y238 1755 aa26.69■■□□□ 1.86
CLN6-207ENST00000566347 PRAMEF22A3QJZ6 481 aa26.69■■□□□ 1.86
CLN6-207ENST00000566347 CAMTA2O94983 1202 aa26.69■■□□□ 1.86
CLN6-207ENST00000566347 DZIP3Q86Y13 1208 aaKnown RBP26.69■■□□□ 1.86
CLN6-207ENST00000566347 BCORQ6W2J9 1755 aa26.69■■□□□ 1.86
CLN6-207ENST00000566347 H0YIN7 160 aa26.67■■□□□ 1.86
CLN6-207ENST00000566347 DDX10Q13206 875 aaKnown RBP26.67■■□□□ 1.86
CLN6-207ENST00000566347 C2CD5Q86YS7 1000 aa26.67■■□□□ 1.86
CLN6-207ENST00000566347 SETDB2Q96T68 719 aa26.67■■□□□ 1.86
CLN6-207ENST00000566347 PDZRN3Q9UPQ7 1066 aa26.67■■□□□ 1.86
CLN6-207ENST00000566347 C9orf131Q5VYM1 1079 aa26.66■■□□□ 1.86
CLN6-207ENST00000566347 PIP4K2AP48426 406 aaPredicted RBP26.65■■□□□ 1.86
CLN6-207ENST00000566347 TTLL6Q8N841 843 aa26.65■■□□□ 1.86
CLN6-207ENST00000566347 BRIP1Q9BX63 1249 aa26.65■■□□□ 1.86
CLN6-207ENST00000566347 MIS18AQ9NYP9 233 aa26.65■■□□□ 1.86
CLN6-207ENST00000566347 KDM3BQ7LBC6 1761 aa26.65■■□□□ 1.86
CLN6-207ENST00000566347 PDE6BP35913 854 aa26.64■■□□□ 1.86
CLN6-207ENST00000566347 PRR5LQ6MZQ0 368 aa26.64■■□□□ 1.86
CLN6-207ENST00000566347 CLEC4GQ6UXB4 293 aa26.64■■□□□ 1.86
CLN6-207ENST00000566347 ZNF652Q9Y2D9 606 aa26.64■■□□□ 1.86
CLN6-207ENST00000566347 LAMB4A4D0S4 1761 aa26.63■■□□□ 1.85
CLN6-207ENST00000566347 MYBBP1AQ9BQG0 1328 aaKnown RBP26.63■■□□□ 1.85
CLN6-207ENST00000566347 ANKRD31Q8N7Z5 1873 aa26.62■■□□□ 1.85
CLN6-207ENST00000566347 RGL2O15211 777 aa26.62■■□□□ 1.85
CLN6-207ENST00000566347 NPHP1O15259 732 aa26.62■■□□□ 1.85
CLN6-207ENST00000566347 CNBD1Q8NA66 436 aa26.62■■□□□ 1.85
CLN6-207ENST00000566347 NBPF26B4DH59 902 aa26.61■■□□□ 1.85
CLN6-207ENST00000566347 NBPF10Q6P3W6 841 aaKnown RBP26.61■■□□□ 1.85
CLN6-207ENST00000566347 NBPF15Q8N660 670 aa26.61■■□□□ 1.85
CLN6-207ENST00000566347 KIF3CO14782 793 aa26.6■■□□□ 1.85
CLN6-207ENST00000566347 ST5P78524 1137 aa26.6■■□□□ 1.85
CLN6-207ENST00000566347 RNF181Q9P0P0 153 aa26.6■■□□□ 1.85
CLN6-207ENST00000566347 SBF1O95248 1867 aa26.59■■□□□ 1.85
CLN6-207ENST00000566347 THUMPD2Q9BTF0 503 aaKnown RBP26.59■■□□□ 1.85
CLN6-207ENST00000566347 EIF4A1P60842 406 aaKnown RBP26.58■■□□□ 1.85
CLN6-207ENST00000566347 ZNF622Q969S3 477 aaKnown RBP eCLIP26.57■■□□□ 1.84
CLN6-207ENST00000566347 RIPK4P57078 832 aa26.56■■□□□ 1.84
CLN6-207ENST00000566347 LMOD3Q0VAK6 560 aa26.56■■□□□ 1.84
CLN6-207ENST00000566347 NBPF5PQ86XG9 351 aaPredicted RBP26.56■■□□□ 1.84
CLN6-207ENST00000566347 CCDC24Q8N4L8 307 aa26.56■■□□□ 1.84
CLN6-207ENST00000566347 COL11A2P13942 1736 aaPredicted RBP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms