RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZSCAN25Q6NSZ9 544 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 ITPRIPQ8IWB1 547 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 CHMP7Q8WUX9 453 aaPredicted RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 PPP1R1BQ9UD71 204 aaPredicted RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 EXOC6BQ9Y2D4 811 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 MX1P20591 662 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 MAGEA9P43362 315 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 SRLQ86TD4 932 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 P4HBP07237 508 aaKnown RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 HCLS1P14317 486 aaPredicted RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 CDC25BP30305 580 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 NAP1L4Q99733 375 aaKnown RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 TPD52L1Q16890 204 aaPredicted RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 TMED8Q6PL24 325 aaPredicted RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 PLA2G4DQ86XP0 818 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 FAM200AQ8TCP9 573 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 CACTINQ8WUQ7 758 aaKnown RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 INTS4Q96HW7 963 aaKnown RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 SRCIN1Q9C0H9 1055 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.43□□□□□ -1.86
CHD9-218ENST00000566029 V9GYY5 206 aaPredicted RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 LIG1P18858 919 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 ADCY10Q96PN6 1610 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 A0A087WUV0 522 aaPredicted RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 ELF2Q15723 593 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 HSP90AB4PQ58FF6 505 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 TTC22Q5TAA0 569 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 RPAINQ86UA6 219 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 RRP7AQ9Y3A4 280 aaKnown RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 CORO7P57737 925 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 GTF3C6Q969F1 213 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 EXOC4Q96A65 974 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 POLE3Q9NRF9 147 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 CFDP1Q9UEE9 299 aaPredicted RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 SEC63Q9UGP8 760 aaKnown RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 RRP12Q5JTH9 1297 aaKnown RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 MRFAP1L1Q96HT8 127 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 ORC3Q9UBD5 711 aaPredicted RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.43□□□□□ -1.861e-6■■□□□ 13.9
CHD9-218ENST00000566029 WDR62O43379 1518 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 EGFL6Q8IUX8 553 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 CXorf56Q9H5V9 222 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 MSH6P52701 1360 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 NAP1L1P55209 391 aaKnown RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 DIXDC1Q155Q3 683 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 LCA5Q86VQ0 697 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 DRC1Q96MC2 740 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 RBM28Q9NW13 759 aaKnown RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 ADGRL1O94910 1474 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 CCP110O43303 1012 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 CCDC172P0C7W6 258 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 GSPT1P15170 499 aaKnown RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 FOXR1Q6PIV2 292 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 PRG4Q92954 1404 aaPredicted RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 MED14O60244 1454 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 PSDA5PKW4 1024 aaPredicted RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 LRMPQ12912 555 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 BCL2L13Q9BXK5 485 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 RAI14Q9P0K7 980 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 ERVK-7P63135 1459 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 ASXL1Q8IXJ9 1541 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 ECM2O94769 699 aaPredicted RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 TRHP20396 242 aaPredicted RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 ACTN2P35609 894 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 TTC31Q49AM3 519 aaPredicted RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 SARM1Q6SZW1 724 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 DNAI2Q9GZS0 605 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 E9PCH4 1651 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 FOSL2P15408 326 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 ZSCAN26Q16670 478 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 DNAJC21Q5F1R6 531 aaKnown RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 SIRT2Q8IXJ6 389 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 TBC1D8O95759 1140 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 TUBB4AP04350 444 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 RBM43Q6ZSC3 357 aaKnown RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 RTF1Q92541 710 aaKnown RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 TRAPPC8Q9Y2L5 1435 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 GOLIM4O00461 696 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 ELP1O95163 1332 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 ATP6V1AP38606 617 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 TPM4P67936 248 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 WDR33Q9C0J8 1336 aaKnown RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 MED4Q9NPJ6 270 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 BSDC1Q9NW68 430 aaPredicted RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 IFT57Q9NWB7 429 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 NRBP1Q9UHY1 535 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 KIF24Q5T7B8 1368 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 CEP135Q66GS9 1140 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 EP400NLQ6ZTU2 488 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.42□□□□□ -1.86
CHD9-218ENST00000566029 ITGB1BP2Q9UKP3 347 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 IFT140Q96RY7 1462 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 SARNPP82979 210 aaKnown RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 CCZ1BP86790 482 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 CCZ1P86791 482 aaPredicted RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 SF3A1Q15459 793 aaKnown RBP3.42□□□□□ -1.86
CHD9-218ENST00000566029 CNPY2Q9Y2B0 182 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 F13A1P00488 732 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 ANKRD44Q8N8A2 993 aa3.42□□□□□ -1.86
CHD9-218ENST00000566029 TSPY4P0CV99 314 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms