RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 NHSQ6T4R5 1651 aa23.87■■□□□ 1.41
COMMD4-213ENST00000565834 G2E3Q7L622 706 aa23.87■■□□□ 1.41
COMMD4-213ENST00000565834 COG6Q9Y2V7 657 aa23.87■■□□□ 1.41
COMMD4-213ENST00000565834 SBF2Q86WG5 1849 aa23.87■■□□□ 1.41
COMMD4-213ENST00000565834 USP16Q9Y5T5 823 aa23.86■■□□□ 1.41
COMMD4-213ENST00000565834 FLIIQ13045 1269 aa23.86■■□□□ 1.41
COMMD4-213ENST00000565834 PPP4R2Q9NY27 417 aa23.86■■□□□ 1.41
COMMD4-213ENST00000565834 KCNQ2O43526 872 aa23.85■■□□□ 1.41
COMMD4-213ENST00000565834 FAM182BQ5T319 152 aa23.85■■□□□ 1.41
COMMD4-213ENST00000565834 VSIG10Q8N0Z9 540 aa23.85■■□□□ 1.41
COMMD4-213ENST00000565834 RBM42Q9BTD8 480 aaKnown RBP23.85■■□□□ 1.41
COMMD4-213ENST00000565834 ABCC4O15439 1325 aa23.84■■□□□ 1.41
COMMD4-213ENST00000565834 RGS12O14924 1447 aa23.84■■□□□ 1.41
COMMD4-213ENST00000565834 MVPQ14764 893 aaKnown RBP23.83■■□□□ 1.41
COMMD4-213ENST00000565834 DDX21Q9NR30 783 aaKnown RBP eCLIP23.83■■□□□ 1.41
COMMD4-213ENST00000565834 RXRBP28702 533 aa23.83■■□□□ 1.4
COMMD4-213ENST00000565834 FKBP5Q13451 457 aaPredicted RBP23.83■■□□□ 1.4
COMMD4-213ENST00000565834 KRT27Q7Z3Y8 459 aa23.83■■□□□ 1.4
COMMD4-213ENST00000565834 TMEM57Q8N5G2 664 aa23.83■■□□□ 1.4
COMMD4-213ENST00000565834 BTAF1O14981 1849 aa23.82■■□□□ 1.4
COMMD4-213ENST00000565834 ANXA1P04083 346 aa23.82■■□□□ 1.4
COMMD4-213ENST00000565834 ITPRIPQ8IWB1 547 aa23.82■■□□□ 1.4
COMMD4-213ENST00000565834 TEX13AQ9BXU3 409 aaPredicted RBP23.82■■□□□ 1.4
COMMD4-213ENST00000565834 PHAXQ9H814 394 aaKnown RBP23.82■■□□□ 1.4
COMMD4-213ENST00000565834 HYPKQ9NX55 129 aa23.82■■□□□ 1.4
COMMD4-213ENST00000565834 RGS17Q9UGC6 210 aaPredicted RBP23.82■■□□□ 1.4
COMMD4-213ENST00000565834 PROSER3Q2NL68 480 aa23.81■■□□□ 1.4
COMMD4-213ENST00000565834 SMARCC1Q92922 1105 aaPredicted RBP23.81■■□□□ 1.4
COMMD4-213ENST00000565834 ERBB4Q15303 1308 aa23.81■■□□□ 1.4
COMMD4-213ENST00000565834 PDIA6Q15084 440 aa23.8■■□□□ 1.4
COMMD4-213ENST00000565834 TJP1Q07157 1748 aa23.8■■□□□ 1.4
COMMD4-213ENST00000565834 PALLDQ8WX93 1383 aa23.79■■□□□ 1.4
COMMD4-213ENST00000565834 DDX19BQ9UMR2 479 aa23.79■■□□□ 1.4
COMMD4-213ENST00000565834 DNAJC10Q8IXB1 793 aa23.78■■□□□ 1.4
COMMD4-213ENST00000565834 MYL6BP14649 208 aa23.77■■□□□ 1.4
COMMD4-213ENST00000565834 SLC4A9Q96Q91 983 aa23.77■■□□□ 1.4
COMMD4-213ENST00000565834 CICQ96RK0 1608 aaPredicted RBP23.77■■□□□ 1.4
COMMD4-213ENST00000565834 N4BP2Q86UW6 1770 aaPredicted RBP23.77■■□□□ 1.4
COMMD4-213ENST00000565834 F6X3S4 739 aa23.76■■□□□ 1.39
COMMD4-213ENST00000565834 STARD3NLO95772 234 aa23.76■■□□□ 1.39
COMMD4-213ENST00000565834 FAM196AQ6ZSG2 479 aa23.76■■□□□ 1.39
COMMD4-213ENST00000565834 AAMPQ13685 434 aa23.76■■□□□ 1.39
COMMD4-213ENST00000565834 INTS3Q68E01 1043 aaKnown RBP23.76■■□□□ 1.39
COMMD4-213ENST00000565834 POTEAQ6S8J7 498 aa23.76■■□□□ 1.39
COMMD4-213ENST00000565834 PXDNLA1KZ92 1463 aa23.75■■□□□ 1.39
COMMD4-213ENST00000565834 ZNF831Q5JPB2 1677 aa23.75■■□□□ 1.39
COMMD4-213ENST00000565834 LOC102724428A0A0B4J2F2 783 aa23.75■■□□□ 1.39
COMMD4-213ENST00000565834 SIK1P57059 783 aa23.75■■□□□ 1.39
COMMD4-213ENST00000565834 PTF1AQ7RTS3 328 aa23.75■■□□□ 1.39
COMMD4-213ENST00000565834 A1BGP04217 495 aa23.74■■□□□ 1.39
COMMD4-213ENST00000565834 PIP4K2AP48426 406 aaPredicted RBP23.74■■□□□ 1.39
COMMD4-213ENST00000565834 SLC4A10Q6U841 1118 aa23.74■■□□□ 1.39
COMMD4-213ENST00000565834 CCDC136Q96JN2 1154 aa23.74■■□□□ 1.39
COMMD4-213ENST00000565834 NBPF26B4DH59 902 aa23.73■■□□□ 1.39
COMMD4-213ENST00000565834 DDX58O95786 925 aaKnown RBP23.73■■□□□ 1.39
COMMD4-213ENST00000565834 NBPF14Q5TI25 921 aa23.73■■□□□ 1.39
COMMD4-213ENST00000565834 NBPF10Q6P3W6 841 aaKnown RBP23.73■■□□□ 1.39
COMMD4-213ENST00000565834 NBPF15Q8N660 670 aa23.73■■□□□ 1.39
COMMD4-213ENST00000565834 ATP6V1AP38606 617 aa23.73■■□□□ 1.39
COMMD4-213ENST00000565834 CCT4P50991 539 aaKnown RBP23.73■■□□□ 1.39
COMMD4-213ENST00000565834 B4GALNT3Q6L9W6 998 aa23.73■■□□□ 1.39
COMMD4-213ENST00000565834 LRP10Q7Z4F1 713 aa23.73■■□□□ 1.39
COMMD4-213ENST00000565834 CHMP4BQ9H444 224 aaKnown RBP23.73■■□□□ 1.39
COMMD4-213ENST00000565834 CYP19A1P11511 503 aaPredicted RBP23.72■■□□□ 1.39
COMMD4-213ENST00000565834 AIMP1Q12904 312 aaKnown RBP23.72■■□□□ 1.39
COMMD4-213ENST00000565834 XAGE3Q8WTP9 111 aa23.72■■□□□ 1.39
COMMD4-213ENST00000565834 BCL11BQ9C0K0 894 aaPredicted RBP23.72■■□□□ 1.39
COMMD4-213ENST00000565834 ADCY9O60503 1353 aa23.72■■□□□ 1.39
COMMD4-213ENST00000565834 PI4KAP2A4QPH2 592 aa23.71■■□□□ 1.39
COMMD4-213ENST00000565834 COPS6Q7L5N1 327 aa23.71■■□□□ 1.39
COMMD4-213ENST00000565834 PI4KAP1Q8N8J0 262 aa23.71■■□□□ 1.39
COMMD4-213ENST00000565834 KSR2Q6VAB6 950 aa23.7■■□□□ 1.39
COMMD4-213ENST00000565834 DNAAF4Q8WXU2 420 aa23.7■■□□□ 1.39
COMMD4-213ENST00000565834 LY75O60449 1722 aa23.7■■□□□ 1.38
COMMD4-213ENST00000565834 COL5A3P25940 1745 aaPredicted RBP23.7■■□□□ 1.38
COMMD4-213ENST00000565834 ZBTB7BO15156 539 aaPredicted RBP23.68■■□□□ 1.38
COMMD4-213ENST00000565834 MAP3K2Q9Y2U5 619 aa23.68■■□□□ 1.38
COMMD4-213ENST00000565834 ITPK1Q13572 414 aa23.67■■□□□ 1.38
COMMD4-213ENST00000565834 ZBTB40Q9NUA8 1239 aa23.67■■□□□ 1.38
COMMD4-213ENST00000565834 ARFGEF2Q9Y6D5 1785 aa23.67■■□□□ 1.38
COMMD4-213ENST00000565834 RREB1Q92766 1687 aa23.67■■□□□ 1.38
COMMD4-213ENST00000565834 ATP10DQ9P241 1426 aa23.67■■□□□ 1.38
COMMD4-213ENST00000565834 RIC3Q7Z5B4 369 aa23.67■■□□□ 1.38
COMMD4-213ENST00000565834 ANKRD13DQ6ZTN6 518 aa23.66■■□□□ 1.38
COMMD4-213ENST00000565834 EP400Q96L91 3159 aa23.65■■□□□ 1.38
COMMD4-213ENST00000565834 TRIM37O94972 964 aa23.65■■□□□ 1.38
COMMD4-213ENST00000565834 ZBTB1Q9Y2K1 713 aa23.65■■□□□ 1.38
COMMD4-213ENST00000565834 NUP188Q5SRE5 1749 aa23.65■■□□□ 1.38
COMMD4-213ENST00000565834 MYH14Q7Z406 1995 aaKnown RBP23.65■■□□□ 1.38
COMMD4-213ENST00000565834 SRCIN1Q9C0H9 1055 aa23.64■■□□□ 1.38
COMMD4-213ENST00000565834 CCDC87Q9NVE4 849 aa23.64■■□□□ 1.38
COMMD4-213ENST00000565834 ZNF330Q9Y3S2 320 aaPredicted RBP23.64■■□□□ 1.38
COMMD4-213ENST00000565834 CRKLP46109 303 aaKnown RBP23.64■■□□□ 1.37
COMMD4-213ENST00000565834 BEND3Q5T5X7 828 aa23.64■■□□□ 1.37
COMMD4-213ENST00000565834 PLBD2Q8NHP8 589 aa23.64■■□□□ 1.37
COMMD4-213ENST00000565834 TAF1LQ8IZX4 1826 aa23.62■■□□□ 1.37
COMMD4-213ENST00000565834 TTLL7Q6ZT98 887 aa23.62■■□□□ 1.37
COMMD4-213ENST00000565834 CCNL1Q9UK58 526 aaPredicted RBP23.62■■□□□ 1.37
COMMD4-213ENST00000565834 IL6STP40189 918 aaPredicted RBP23.61■■□□□ 1.37
COMMD4-213ENST00000565834 NEXNQ0ZGT2 675 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms