RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 AAMPQ13685 434 aa14.28□□□□□ -0.12
SNX29-204ENST00000564791 PHAXQ9H814 394 aaKnown RBP14.28□□□□□ -0.12
SNX29-204ENST00000564791 DBF4Q9UBU7 674 aaPredicted RBP14.28□□□□□ -0.12
SNX29-204ENST00000564791 PRIM1P49642 420 aaKnown RBP14.27□□□□□ -0.12
SNX29-204ENST00000564791 PROSER3Q2NL68 480 aa14.27□□□□□ -0.12
SNX29-204ENST00000564791 SYTL4Q96C24 671 aaPredicted RBP14.27□□□□□ -0.12
SNX29-204ENST00000564791 ASAP1Q9ULH1 1129 aa14.27□□□□□ -0.12
SNX29-204ENST00000564791 F6X3S4 739 aa14.26□□□□□ -0.13
SNX29-204ENST00000564791 PTCD1O75127 700 aaKnown RBP14.26□□□□□ -0.13
SNX29-204ENST00000564791 INTS3Q68E01 1043 aaKnown RBP14.26□□□□□ -0.13
SNX29-204ENST00000564791 ACSBG1Q96GR2 724 aa14.26□□□□□ -0.13
SNX29-204ENST00000564791 ATG3Q9NT62 314 aa14.26□□□□□ -0.13
SNX29-204ENST00000564791 USP16Q9Y5T5 823 aa14.26□□□□□ -0.13
SNX29-204ENST00000564791 PDIA6Q15084 440 aa14.26□□□□□ -0.13
SNX29-204ENST00000564791 DDX21Q9NR30 783 aaKnown RBP eCLIP14.26□□□□□ -0.13
SNX29-204ENST00000564791 PXDNLA1KZ92 1463 aa14.26□□□□□ -0.13
SNX29-204ENST00000564791 QTRT2Q9H974 415 aaKnown RBP14.25□□□□□ -0.13
SNX29-204ENST00000564791 ZBTB40Q9NUA8 1239 aa14.25□□□□□ -0.13
SNX29-204ENST00000564791 TJP1Q07157 1748 aa14.24□□□□□ -0.13
SNX29-204ENST00000564791 SLC4A10Q6U841 1118 aa14.24□□□□□ -0.13
SNX29-204ENST00000564791 HYPKQ9NX55 129 aa14.24□□□□□ -0.13
SNX29-204ENST00000564791 PCDHB15Q9Y5E8 787 aa14.24□□□□□ -0.13
SNX29-204ENST00000564791 KDM2BQ8NHM5 1336 aa14.24□□□□□ -0.13
SNX29-204ENST00000564791 ZBTB7BO15156 539 aaPredicted RBP14.23□□□□□ -0.13
SNX29-204ENST00000564791 ADCY9O60503 1353 aa14.23□□□□□ -0.13
SNX29-204ENST00000564791 NHSQ6T4R5 1651 aa14.23□□□□□ -0.13
SNX29-204ENST00000564791 ONECUT3O60422 494 aaPredicted RBP14.23□□□□□ -0.13
SNX29-204ENST00000564791 MYL6BP14649 208 aa14.23□□□□□ -0.13
SNX29-204ENST00000564791 CCT4P50991 539 aaKnown RBP14.23□□□□□ -0.13
SNX29-204ENST00000564791 RBM42Q9BTD8 480 aaKnown RBP14.23□□□□□ -0.13
SNX29-204ENST00000564791 CHMP4BQ9H444 224 aaKnown RBP14.23□□□□□ -0.13
SNX29-204ENST00000564791 BRWD3Q6RI45 1802 aa14.22□□□□□ -0.13
SNX29-204ENST00000564791 SBF2Q86WG5 1849 aa14.22□□□□□ -0.13
SNX29-204ENST00000564791 PIP4K2AP48426 406 aaPredicted RBP14.22□□□□□ -0.13
SNX29-204ENST00000564791 SEPT12Q8IYM1 358 aa14.22□□□□□ -0.13
SNX29-204ENST00000564791 VSIG10Q8N0Z9 540 aa14.22□□□□□ -0.13
SNX29-204ENST00000564791 ERBB4Q15303 1308 aa14.22□□□□□ -0.13
SNX29-204ENST00000564791 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.13
SNX29-204ENST00000564791 KCNQ2O43526 872 aa14.21□□□□□ -0.13
SNX29-204ENST00000564791 IGHDP01880 384 aa14.21□□□□□ -0.13
SNX29-204ENST00000564791 CENPQQ7L2Z9 268 aaPredicted RBP14.21□□□□□ -0.13
SNX29-204ENST00000564791 LRP10Q7Z4F1 713 aa14.21□□□□□ -0.13
SNX29-204ENST00000564791 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.13
SNX29-204ENST00000564791 FBXO41Q8TF61 875 aa14.21□□□□□ -0.13
SNX29-204ENST00000564791 BTAF1O14981 1849 aa14.21□□□□□ -0.13
SNX29-204ENST00000564791 ARFGEF2Q9Y6D5 1785 aa14.2□□□□□ -0.14
SNX29-204ENST00000564791 CICQ96RK0 1608 aaPredicted RBP14.2□□□□□ -0.14
SNX29-204ENST00000564791 AIMP1Q12904 312 aaKnown RBP14.2□□□□□ -0.14
SNX29-204ENST00000564791 DNAJC10Q8IXB1 793 aa14.2□□□□□ -0.14
SNX29-204ENST00000564791 XAGE3Q8WTP9 111 aa14.2□□□□□ -0.14
SNX29-204ENST00000564791 DNAAF4Q8WXU2 420 aa14.2□□□□□ -0.14
SNX29-204ENST00000564791 SLC4A9Q96Q91 983 aa14.2□□□□□ -0.14
SNX29-204ENST00000564791 C1orf115Q9H7X2 142 aa14.2□□□□□ -0.14
SNX29-204ENST00000564791 NBPF26B4DH59 902 aa14.19□□□□□ -0.14
SNX29-204ENST00000564791 A1BGP04217 495 aa14.19□□□□□ -0.14
SNX29-204ENST00000564791 FAM182BQ5T319 152 aa14.19□□□□□ -0.14
SNX29-204ENST00000564791 NBPF14Q5TI25 921 aa14.19□□□□□ -0.14
SNX29-204ENST00000564791 NBPF10Q6P3W6 841 aaKnown RBP14.19□□□□□ -0.14
SNX29-204ENST00000564791 KSR2Q6VAB6 950 aa14.19□□□□□ -0.14
SNX29-204ENST00000564791 NBPF15Q8N660 670 aa14.19□□□□□ -0.14
SNX29-204ENST00000564791 ATP10DQ9P241 1426 aa14.19□□□□□ -0.14
SNX29-204ENST00000564791 ZNF772Q68DY9 489 aaPredicted RBP14.19□□□□□ -0.14
SNX29-204ENST00000564791 MEIS3Q99687 375 aa14.19□□□□□ -0.14
SNX29-204ENST00000564791 TEX13AQ9BXU3 409 aaPredicted RBP14.19□□□□□ -0.14
SNX29-204ENST00000564791 NUP188Q5SRE5 1749 aa14.19□□□□□ -0.14
SNX29-204ENST00000564791 PALLDQ8WX93 1383 aa14.18□□□□□ -0.14
SNX29-204ENST00000564791 DDX58O95786 925 aaKnown RBP14.18□□□□□ -0.14
SNX29-204ENST00000564791 COPS6Q7L5N1 327 aa14.18□□□□□ -0.14
SNX29-204ENST00000564791 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
SNX29-204ENST00000564791 SRCIN1Q9C0H9 1055 aa14.18□□□□□ -0.14
SNX29-204ENST00000564791 MAP3K2Q9Y2U5 619 aa14.18□□□□□ -0.14
SNX29-204ENST00000564791 BEND3Q5T5X7 828 aa14.17□□□□□ -0.14
SNX29-204ENST00000564791 RWDD1Q9H446 243 aaPredicted RBP14.17□□□□□ -0.14
SNX29-204ENST00000564791 ZNF831Q5JPB2 1677 aa14.17□□□□□ -0.14
SNX29-204ENST00000564791 AFDNP55196 1824 aaKnown RBP14.16□□□□□ -0.14
SNX29-204ENST00000564791 STARD3NLO95772 234 aa14.16□□□□□ -0.14
SNX29-204ENST00000564791 HDAC1Q13547 482 aaPredicted RBP14.16□□□□□ -0.14
SNX29-204ENST00000564791 PTF1AQ7RTS3 328 aa14.16□□□□□ -0.14
SNX29-204ENST00000564791 SMARCC1Q92922 1105 aaPredicted RBP14.16□□□□□ -0.14
SNX29-204ENST00000564791 COL5A3P25940 1745 aaPredicted RBP14.16□□□□□ -0.14
SNX29-204ENST00000564791 RREB1Q92766 1687 aa14.15□□□□□ -0.14
SNX29-204ENST00000564791 CYP19A1P11511 503 aaPredicted RBP14.15□□□□□ -0.14
SNX29-204ENST00000564791 RIC3Q7Z5B4 369 aa14.15□□□□□ -0.14
SNX29-204ENST00000564791 LOC102724428A0A0B4J2F2 783 aa14.15□□□□□ -0.14
SNX29-204ENST00000564791 SIK1P57059 783 aa14.15□□□□□ -0.14
SNX29-204ENST00000564791 RBM6P78332 1123 aaKnown RBP14.15□□□□□ -0.14
SNX29-204ENST00000564791 GNAI3P08754 354 aa14.14□□□□□ -0.15
SNX29-204ENST00000564791 TTLL7Q6ZT98 887 aa14.14□□□□□ -0.15
SNX29-204ENST00000564791 ANKRD13DQ6ZTN6 518 aa14.14□□□□□ -0.15
SNX29-204ENST00000564791 MYH14Q7Z406 1995 aaKnown RBP14.13□□□□□ -0.15
SNX29-204ENST00000564791 ALDH1L1O75891 902 aa14.13□□□□□ -0.15
SNX29-204ENST00000564791 ATP6V1AP38606 617 aa14.13□□□□□ -0.15
SNX29-204ENST00000564791 SKAP1Q86WV1 359 aa14.13□□□□□ -0.15
SNX29-204ENST00000564791 SIRT2Q8IXJ6 389 aa14.13□□□□□ -0.15
SNX29-204ENST00000564791 METTL22Q9BUU2 404 aaPredicted RBP14.13□□□□□ -0.15
SNX29-204ENST00000564791 USP44Q9H0E7 712 aa14.13□□□□□ -0.15
SNX29-204ENST00000564791 LY75O60449 1722 aa14.13□□□□□ -0.15
SNX29-204ENST00000564791 GNAI2P04899 355 aa14.12□□□□□ -0.15
SNX29-204ENST00000564791 ITPK1Q13572 414 aa14.12□□□□□ -0.15
SNX29-204ENST00000564791 CWF19L2Q2TBE0 894 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms