RNA–Protein interactions for RNA: ENST00000563412.1

TUBGCP4-205, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-205ENST00000563412 HOXC9P31274 260 aa8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 EIF4A2Q14240 407 aaKnown RBP8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 HSP90AB2PQ58FF8 381 aa8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 PLCD3Q8N3E9 789 aa8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 IP6K1Q92551 441 aa8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 SMARCC1Q92922 1105 aaPredicted RBP8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 PLEKHF1Q96S99 279 aa8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 MKRN1Q9UHC7 482 aaKnown RBP8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 NUDCQ9Y266 331 aa8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 CICQ96RK0 1608 aaPredicted RBP8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 U2AF1L5P0DN76 240 aaPredicted RBP8.53□□□□□ -1.04
TUBGCP4-205ENST00000563412 U2AF1Q01081 240 aaKnown RBP eCLIP8.53□□□□□ -1.04
TUBGCP4-205ENST00000563412 MAP2K1Q02750 393 aaPredicted RBP8.53□□□□□ -1.04
TUBGCP4-205ENST00000563412 DALRD3Q5D0E6 543 aaKnown RBP8.53□□□□□ -1.04
TUBGCP4-205ENST00000563412 DPY19L2Q6NUT2 758 aa8.53□□□□□ -1.04
TUBGCP4-205ENST00000563412 ZCRB1Q8TBF4 217 aaKnown RBP8.53□□□□□ -1.04
TUBGCP4-205ENST00000563412 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
TUBGCP4-205ENST00000563412 NCAPD2Q15021 1401 aa8.53□□□□□ -1.04
TUBGCP4-205ENST00000563412 KDRP35968 1356 aa8.52□□□□□ -1.05
TUBGCP4-205ENST00000563412 CENPBP07199 599 aaPredicted RBP8.52□□□□□ -1.05
TUBGCP4-205ENST00000563412 MMP10P09238 476 aa8.52□□□□□ -1.05
TUBGCP4-205ENST00000563412 DPEP1P16444 411 aa8.52□□□□□ -1.05
TUBGCP4-205ENST00000563412 AMPHP49418 695 aa8.52□□□□□ -1.05
TUBGCP4-205ENST00000563412 CCDC146Q8IYE0 955 aa8.52□□□□□ -1.05
TUBGCP4-205ENST00000563412 ANKRD24Q8TF21 1146 aa8.52□□□□□ -1.05
TUBGCP4-205ENST00000563412 RUNDC1Q96C34 613 aa8.52□□□□□ -1.05
TUBGCP4-205ENST00000563412 CCDC87Q9NVE4 849 aa8.52□□□□□ -1.05
TUBGCP4-205ENST00000563412 ZNF521Q96K83 1311 aa8.52□□□□□ -1.05
TUBGCP4-205ENST00000563412 RGPD5Q99666 1765 aa8.51□□□□□ -1.05
TUBGCP4-205ENST00000563412 KCPQ6ZWJ8 1503 aa8.51□□□□□ -1.05
TUBGCP4-205ENST00000563412 APAF1O14727 1248 aa8.51□□□□□ -1.05
TUBGCP4-205ENST00000563412 U2SURPO15042 1029 aaKnown RBP8.51□□□□□ -1.05
TUBGCP4-205ENST00000563412 HS6ST3Q8IZP7 471 aa8.51□□□□□ -1.05
TUBGCP4-205ENST00000563412 NGEFQ8N5V2 710 aa8.51□□□□□ -1.05
TUBGCP4-205ENST00000563412 DCAF5Q96JK2 942 aa8.51□□□□□ -1.05
TUBGCP4-205ENST00000563412 PHF14O94880 888 aa8.5□□□□□ -1.05
TUBGCP4-205ENST00000563412 KCNA3P22001 575 aa8.5□□□□□ -1.05
TUBGCP4-205ENST00000563412 CHADLQ6NUI6 762 aa8.5□□□□□ -1.05
TUBGCP4-205ENST00000563412 AEBP1Q8IUX7 1158 aa8.5□□□□□ -1.05
TUBGCP4-205ENST00000563412 RGPD2P0DJD1 1756 aa8.5□□□□□ -1.05
TUBGCP4-205ENST00000563412 WNK3Q9BYP7 1800 aa8.5□□□□□ -1.05
TUBGCP4-205ENST00000563412 CNTNAP1P78357 1384 aa8.49□□□□□ -1.05
TUBGCP4-205ENST00000563412 LMNB1P20700 586 aa8.49□□□□□ -1.05
TUBGCP4-205ENST00000563412 VEGFBP49765 207 aa8.49□□□□□ -1.05
TUBGCP4-205ENST00000563412 EYA1Q99502 592 aa8.49□□□□□ -1.05
TUBGCP4-205ENST00000563412 BEGAINQ9BUH8 593 aa8.49□□□□□ -1.05
TUBGCP4-205ENST00000563412 FAM208AQ9UK61 1670 aaKnown RBP8.49□□□□□ -1.05
TUBGCP4-205ENST00000563412 HMOX1P09601 288 aa8.48□□□□□ -1.05
TUBGCP4-205ENST00000563412 HSPA8P11142 646 aaKnown RBP8.48□□□□□ -1.05
TUBGCP4-205ENST00000563412 PRKAR2BP31323 418 aa8.48□□□□□ -1.05
TUBGCP4-205ENST00000563412 CCDC27Q2M243 656 aa8.48□□□□□ -1.05
TUBGCP4-205ENST00000563412 TRAPPC3LQ5T215 181 aa8.48□□□□□ -1.05
TUBGCP4-205ENST00000563412 PHACTR3Q96KR7 559 aa8.48□□□□□ -1.05
TUBGCP4-205ENST00000563412 ZBTB47Q9UFB7 747 aaPredicted RBP8.48□□□□□ -1.05
TUBGCP4-205ENST00000563412 PARP3Q9Y6F1 533 aa8.48□□□□□ -1.05
TUBGCP4-205ENST00000563412 TMEM88BA6NKF7 163 aa8.47□□□□□ -1.05
TUBGCP4-205ENST00000563412 TMPOP42166 694 aaKnown RBP8.47□□□□□ -1.05
TUBGCP4-205ENST00000563412 NBPF6Q5VWK0 638 aa8.47□□□□□ -1.05
TUBGCP4-205ENST00000563412 SULT6B1Q6IMI4 303 aa8.47□□□□□ -1.05
TUBGCP4-205ENST00000563412 MPRIPQ6WCQ1 1025 aa8.47□□□□□ -1.05
TUBGCP4-205ENST00000563412 SMIM5Q71RC9 77 aa8.47□□□□□ -1.05
TUBGCP4-205ENST00000563412 NBPF4Q96M43 638 aa8.47□□□□□ -1.05
TUBGCP4-205ENST00000563412 PNNQ9H307 717 aaKnown RBP8.47□□□□□ -1.05
TUBGCP4-205ENST00000563412 TUBGCP6Q96RT7 1819 aa8.47□□□□□ -1.05
TUBGCP4-205ENST00000563412 PALLDQ8WX93 1383 aa8.47□□□□□ -1.05
TUBGCP4-205ENST00000563412 DLG5Q8TDM6 1919 aa8.46□□□□□ -1.05
TUBGCP4-205ENST00000563412 LY75O60449 1722 aa8.46□□□□□ -1.05
TUBGCP4-205ENST00000563412 NFE2L2Q16236 605 aa8.46□□□□□ -1.06
TUBGCP4-205ENST00000563412 DEFB115Q30KQ5 88 aa8.46□□□□□ -1.06
TUBGCP4-205ENST00000563412 PRPF38BQ5VTL8 546 aaKnown RBP8.46□□□□□ -1.06
TUBGCP4-205ENST00000563412 WWC1Q8IX03 1113 aa8.46□□□□□ -1.06
TUBGCP4-205ENST00000563412 TRMT2AQ8IZ69 625 aaKnown RBP8.46□□□□□ -1.06
TUBGCP4-205ENST00000563412 TRIM35Q9UPQ4 493 aa8.46□□□□□ -1.06
TUBGCP4-205ENST00000563412 RRP7AQ9Y3A4 280 aaKnown RBP8.46□□□□□ -1.06
TUBGCP4-205ENST00000563412 POTECB2RU33 542 aa8.45□□□□□ -1.06
TUBGCP4-205ENST00000563412 AMIGO3Q86WK7 504 aa8.45□□□□□ -1.06
TUBGCP4-205ENST00000563412 GCC1Q96CN9 775 aa8.45□□□□□ -1.06
TUBGCP4-205ENST00000563412 LTV1Q96GA3 475 aaPredicted RBP8.45□□□□□ -1.06
TUBGCP4-205ENST00000563412 CDCA7LQ96GN5 454 aa8.45□□□□□ -1.06
TUBGCP4-205ENST00000563412 CIZ1Q9ULV3 898 aaPredicted RBP8.45□□□□□ -1.06
TUBGCP4-205ENST00000563412 SALL2Q9Y467 1007 aaPredicted RBP8.45□□□□□ -1.06
TUBGCP4-205ENST00000563412 MAPK8IP3Q9UPT6 1336 aa8.45□□□□□ -1.06
TUBGCP4-205ENST00000563412 LOC102724428A0A0B4J2F2 783 aa8.44□□□□□ -1.06
TUBGCP4-205ENST00000563412 GNPATO15228 680 aa8.44□□□□□ -1.06
TUBGCP4-205ENST00000563412 SIK1P57059 783 aa8.44□□□□□ -1.06
TUBGCP4-205ENST00000563412 WDR63Q8IWG1 891 aa8.44□□□□□ -1.06
TUBGCP4-205ENST00000563412 RTCBQ9Y3I0 505 aaKnown RBP8.44□□□□□ -1.06
TUBGCP4-205ENST00000563412 TNRC6CQ9HCJ0 1690 aaKnown RBP8.43□□□□□ -1.06
TUBGCP4-205ENST00000563412 RASSF10A6NK89 507 aa8.43□□□□□ -1.06
TUBGCP4-205ENST00000563412 RFC4P35249 363 aa8.43□□□□□ -1.06
TUBGCP4-205ENST00000563412 GOLGA2Q08379 1002 aa8.43□□□□□ -1.06
TUBGCP4-205ENST00000563412 SLFN5Q08AF3 891 aa8.43□□□□□ -1.06
TUBGCP4-205ENST00000563412 DUSP27Q5VZP5 1158 aa8.43□□□□□ -1.06
TUBGCP4-205ENST00000563412 USHBP1Q8N6Y0 703 aa8.43□□□□□ -1.06
TUBGCP4-205ENST00000563412 RAPGEF4Q8WZA2 1011 aa8.43□□□□□ -1.06
TUBGCP4-205ENST00000563412 IL16Q14005 1332 aa8.43□□□□□ -1.06
TUBGCP4-205ENST00000563412 PASKQ96RG2 1323 aa8.43□□□□□ -1.06
TUBGCP4-205ENST00000563412 IQCA1LA6NCM1 817 aa8.42□□□□□ -1.06
TUBGCP4-205ENST00000563412 CA12O43570 354 aa8.42□□□□□ -1.06
TUBGCP4-205ENST00000563412 ATP6V1AP38606 617 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms