RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
NSMCE1-202ENST00000561960 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
NSMCE1-202ENST00000561960 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
NSMCE1-202ENST00000561960 COL11A2P13942 1736 aaPredicted RBP16.01■□□□□ 0.15
NSMCE1-202ENST00000561960 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
NSMCE1-202ENST00000561960 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
NSMCE1-202ENST00000561960 BICDL1Q6ZP65 573 aa16■□□□□ 0.15
NSMCE1-202ENST00000561960 RBM46Q8TBY0 533 aaKnown RBP16■□□□□ 0.15
NSMCE1-202ENST00000561960 NRXN2Q9P2S2 1712 aa15.99■□□□□ 0.15
NSMCE1-202ENST00000561960 ZPR1O75312 459 aa15.99■□□□□ 0.15
NSMCE1-202ENST00000561960 ZBTB1Q9Y2K1 713 aa15.99■□□□□ 0.15
NSMCE1-202ENST00000561960 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
NSMCE1-202ENST00000561960 UBR2Q8IWV8 1755 aa15.98■□□□□ 0.15
NSMCE1-202ENST00000561960 NFIXQ14938 502 aa15.98■□□□□ 0.15
NSMCE1-202ENST00000561960 KLRG1Q96E93 195 aa15.98■□□□□ 0.15
NSMCE1-202ENST00000561960 SOS1Q07889 1333 aaPredicted RBP15.97■□□□□ 0.15
NSMCE1-202ENST00000561960 KDM2BQ8NHM5 1336 aa15.97■□□□□ 0.15
NSMCE1-202ENST00000561960 CANXP27824 592 aaKnown RBP15.97■□□□□ 0.15
NSMCE1-202ENST00000561960 TM4SF1P30408 202 aa15.97■□□□□ 0.15
NSMCE1-202ENST00000561960 IL13P35225 146 aa15.97■□□□□ 0.15
NSMCE1-202ENST00000561960 ZNF330Q9Y3S2 320 aaPredicted RBP15.97■□□□□ 0.15
NSMCE1-202ENST00000561960 COL15A1P39059 1388 aa15.97■□□□□ 0.15
NSMCE1-202ENST00000561960 CYP19A1P11511 503 aaPredicted RBP15.96■□□□□ 0.15
NSMCE1-202ENST00000561960 SLC52A2Q9HAB3 445 aa15.96■□□□□ 0.15
NSMCE1-202ENST00000561960 BCL2L12Q9HB09 334 aa15.96■□□□□ 0.15
NSMCE1-202ENST00000561960 EIF4G2P78344 907 aaKnown RBP eCLIP15.95■□□□□ 0.14
NSMCE1-202ENST00000561960 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
NSMCE1-202ENST00000561960 RNMTO43148 476 aaKnown RBP15.94■□□□□ 0.14
NSMCE1-202ENST00000561960 AKAP4Q5JQC9 854 aa15.94■□□□□ 0.14
NSMCE1-202ENST00000561960 C2CD5Q86YS7 1000 aa15.94■□□□□ 0.14
NSMCE1-202ENST00000561960 MRC1P22897 1456 aa15.94■□□□□ 0.14
NSMCE1-202ENST00000561960 SCN7AQ01118 1682 aa15.93■□□□□ 0.14
NSMCE1-202ENST00000561960 SERPINB2P05120 415 aa15.93■□□□□ 0.14
NSMCE1-202ENST00000561960 MTHFSDQ2M296 383 aaKnown RBP15.93■□□□□ 0.14
NSMCE1-202ENST00000561960 SLX4Q8IY92 1834 aa15.93■□□□□ 0.14
NSMCE1-202ENST00000561960 FER1L6Q2WGJ9 1857 aa15.93■□□□□ 0.14
NSMCE1-202ENST00000561960 SIPA1L3O60292 1781 aaPredicted RBP15.92■□□□□ 0.14
NSMCE1-202ENST00000561960 FSTL1Q12841 308 aa15.92■□□□□ 0.14
NSMCE1-202ENST00000561960 KNSTRNQ9Y448 316 aa15.92■□□□□ 0.14
NSMCE1-202ENST00000561960 CC2D1BQ5T0F9 858 aaKnown RBP15.91■□□□□ 0.14
NSMCE1-202ENST00000561960 NARFQ9UHQ1 456 aa15.91■□□□□ 0.14
NSMCE1-202ENST00000561960 NFKBIEO00221 500 aa15.9■□□□□ 0.14
NSMCE1-202ENST00000561960 LMNB1P20700 586 aa15.9■□□□□ 0.14
NSMCE1-202ENST00000561960 PIP4K2AP48426 406 aaPredicted RBP15.9■□□□□ 0.14
NSMCE1-202ENST00000561960 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
NSMCE1-202ENST00000561960 TNS4Q8IZW8 715 aa15.9■□□□□ 0.14
NSMCE1-202ENST00000561960 SMC1BQ8NDV3 1235 aa15.9■□□□□ 0.14
NSMCE1-202ENST00000561960 ZNF622Q969S3 477 aaKnown RBP eCLIP15.9■□□□□ 0.14
NSMCE1-202ENST00000561960 C21orf2O43822 256 aa15.89■□□□□ 0.13
NSMCE1-202ENST00000561960 TTLL6Q8N841 843 aa15.89■□□□□ 0.13
NSMCE1-202ENST00000561960 TBC1D2BQ9UPU7 963 aa15.89■□□□□ 0.13
NSMCE1-202ENST00000561960 BCORQ6W2J9 1755 aa15.88■□□□□ 0.13
NSMCE1-202ENST00000561960 POTEIP0CG38 1075 aa15.88■□□□□ 0.13
NSMCE1-202ENST00000561960 POTEJP0CG39 1038 aa15.88■□□□□ 0.13
NSMCE1-202ENST00000561960 JMYQ8N9B5 988 aa15.88■□□□□ 0.13
NSMCE1-202ENST00000561960 GLTPD2A6NH11 291 aa15.87■□□□□ 0.13
NSMCE1-202ENST00000561960 H0YIN7 160 aa15.87■□□□□ 0.13
NSMCE1-202ENST00000561960 HSPA1AP0DMV8 641 aaKnown RBP15.87■□□□□ 0.13
NSMCE1-202ENST00000561960 HSPA1BP0DMV9 641 aaKnown RBP15.87■□□□□ 0.13
NSMCE1-202ENST00000561960 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
NSMCE1-202ENST00000561960 POTECB2RU33 542 aa15.86■□□□□ 0.13
NSMCE1-202ENST00000561960 VEGFAP15692 232 aaPredicted RBP15.86■□□□□ 0.13
NSMCE1-202ENST00000561960 U2SURPO15042 1029 aaKnown RBP15.85■□□□□ 0.13
NSMCE1-202ENST00000561960 TTC5Q8N0Z6 440 aa15.85■□□□□ 0.13
NSMCE1-202ENST00000561960 ZNF496Q96IT1 587 aaPredicted RBP15.85■□□□□ 0.13
NSMCE1-202ENST00000561960 ARFGEF2Q9Y6D5 1785 aa15.85■□□□□ 0.13
NSMCE1-202ENST00000561960 KCNQ3O43525 872 aa15.84■□□□□ 0.13
NSMCE1-202ENST00000561960 A1BGP04217 495 aa15.84■□□□□ 0.13
NSMCE1-202ENST00000561960 PRR5LQ6MZQ0 368 aa15.84■□□□□ 0.13
NSMCE1-202ENST00000561960 MKRN1Q9UHC7 482 aaKnown RBP15.84■□□□□ 0.13
NSMCE1-202ENST00000561960 KIF7Q2M1P5 1343 aa15.84■□□□□ 0.13
NSMCE1-202ENST00000561960 NPHP1O15259 732 aa15.83■□□□□ 0.12
NSMCE1-202ENST00000561960 DIAPH1O60610 1272 aaKnown RBP15.83■□□□□ 0.12
NSMCE1-202ENST00000561960 ERFEQ4G0M1 354 aa15.83■□□□□ 0.12
NSMCE1-202ENST00000561960 TIMELESSQ9UNS1 1208 aa15.83■□□□□ 0.12
NSMCE1-202ENST00000561960 PRAMEF22A3QJZ6 481 aa15.82■□□□□ 0.12
NSMCE1-202ENST00000561960 DDNO94850 711 aaPredicted RBP15.82■□□□□ 0.12
NSMCE1-202ENST00000561960 EIF5P55010 431 aaKnown RBP15.82■□□□□ 0.12
NSMCE1-202ENST00000561960 OLFM4Q6UX06 510 aa15.82■□□□□ 0.12
NSMCE1-202ENST00000561960 IL17REQ8NFR9 667 aa15.82■□□□□ 0.12
NSMCE1-202ENST00000561960 CCER1Q8TC90 406 aaPredicted RBP15.82■□□□□ 0.12
NSMCE1-202ENST00000561960 COL3A1P02461 1466 aaPredicted RBP15.82■□□□□ 0.12
NSMCE1-202ENST00000561960 FAM177BA6PVY3 158 aa15.81■□□□□ 0.12
NSMCE1-202ENST00000561960 HEG1Q9ULI3 1381 aa15.8■□□□□ 0.12
NSMCE1-202ENST00000561960 STARD3NLO95772 234 aa15.8■□□□□ 0.12
NSMCE1-202ENST00000561960 TEFQ10587 303 aa15.8■□□□□ 0.12
NSMCE1-202ENST00000561960 ZNF790Q6PG37 636 aa15.79■□□□□ 0.12
NSMCE1-202ENST00000561960 VSIG10Q8N0Z9 540 aa15.79■□□□□ 0.12
NSMCE1-202ENST00000561960 ZC3H4Q9UPT8 1303 aaKnown RBP15.78■□□□□ 0.12
NSMCE1-202ENST00000561960 PRPF40BQ6NWY9 871 aaKnown RBP15.78■□□□□ 0.12
NSMCE1-202ENST00000561960 CNBD1Q8NA66 436 aa15.78■□□□□ 0.12
NSMCE1-202ENST00000561960 GNAT3A8MTJ3 354 aa15.77■□□□□ 0.12
NSMCE1-202ENST00000561960 CAMTA2O94983 1202 aa15.77■□□□□ 0.12
NSMCE1-202ENST00000561960 PDE6BP35913 854 aa15.77■□□□□ 0.12
NSMCE1-202ENST00000561960 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
NSMCE1-202ENST00000561960 SLC51AQ86UW1 340 aa15.77■□□□□ 0.12
NSMCE1-202ENST00000561960 PHACTR3Q96KR7 559 aa15.77■□□□□ 0.12
NSMCE1-202ENST00000561960 BRIP1Q9BX63 1249 aa15.77■□□□□ 0.12
NSMCE1-202ENST00000561960 TAOK3Q9H2K8 898 aa15.77■□□□□ 0.12
NSMCE1-202ENST00000561960 A0A087WZG4 1122 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms