RNA–Protein interactions for RNA: ENST00000561003.5

CSHL1-210, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2 BASIC

Gene CSHL1, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-210ENST00000561003 LGR6Q9HBX8 967 aa13.95□□□□□ -0.18
CSHL1-210ENST00000561003 SOS1Q07889 1333 aaPredicted RBP13.94□□□□□ -0.18
CSHL1-210ENST00000561003 CICQ96RK0 1608 aaPredicted RBP13.94□□□□□ -0.18
CSHL1-210ENST00000561003 GLTPD2A6NH11 291 aa13.94□□□□□ -0.18
CSHL1-210ENST00000561003 DIAPH1O60610 1272 aaKnown RBP13.94□□□□□ -0.18
CSHL1-210ENST00000561003 TOGARAM1Q9Y4F4 1720 aa13.93□□□□□ -0.18
CSHL1-210ENST00000561003 PDE6BP35913 854 aa13.93□□□□□ -0.18
CSHL1-210ENST00000561003 C2CD5Q86YS7 1000 aa13.93□□□□□ -0.18
CSHL1-210ENST00000561003 SLC39A6Q13433 755 aa13.92□□□□□ -0.18
CSHL1-210ENST00000561003 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
CSHL1-210ENST00000561003 BRIP1Q9BX63 1249 aa13.92□□□□□ -0.18
CSHL1-210ENST00000561003 HMOX1P09601 288 aa13.91□□□□□ -0.18
CSHL1-210ENST00000561003 CANXP27824 592 aaKnown RBP13.91□□□□□ -0.18
CSHL1-210ENST00000561003 TEFQ10587 303 aa13.91□□□□□ -0.18
CSHL1-210ENST00000561003 MTHFSDQ2M296 383 aaKnown RBP13.91□□□□□ -0.18
CSHL1-210ENST00000561003 ZNF831Q5JPB2 1677 aa13.91□□□□□ -0.18
CSHL1-210ENST00000561003 EIF5P55010 431 aaKnown RBP13.9□□□□□ -0.18
CSHL1-210ENST00000561003 GAS2L2Q8NHY3 880 aa13.9□□□□□ -0.18
CSHL1-210ENST00000561003 ZBTB1Q9Y2K1 713 aa13.9□□□□□ -0.18
CSHL1-210ENST00000561003 NPHP1O15259 732 aa13.89□□□□□ -0.19
CSHL1-210ENST00000561003 SOGA3Q5TF21 947 aa13.89□□□□□ -0.19
CSHL1-210ENST00000561003 COL15A1P39059 1388 aa13.88□□□□□ -0.19
CSHL1-210ENST00000561003 C4AP0C0L4 1744 aa13.88□□□□□ -0.19
CSHL1-210ENST00000561003 ANKRD26Q9UPS8 1709 aa13.88□□□□□ -0.19
CSHL1-210ENST00000561003 GNAT3A8MTJ3 354 aa13.88□□□□□ -0.19
CSHL1-210ENST00000561003 IL6STP40189 918 aaPredicted RBP13.88□□□□□ -0.19
CSHL1-210ENST00000561003 BICDL1Q6ZP65 573 aa13.88□□□□□ -0.19
CSHL1-210ENST00000561003 CCER1Q8TC90 406 aaPredicted RBP13.88□□□□□ -0.19
CSHL1-210ENST00000561003 CNKSR1Q969H4 720 aa13.88□□□□□ -0.19
CSHL1-210ENST00000561003 ZNF622Q969S3 477 aaKnown RBP eCLIP13.88□□□□□ -0.19
CSHL1-210ENST00000561003 SETDB2Q96T68 719 aa13.88□□□□□ -0.19
CSHL1-210ENST00000561003 ZNF790Q6PG37 636 aa13.87□□□□□ -0.19
CSHL1-210ENST00000561003 BCL2L12Q9HB09 334 aa13.87□□□□□ -0.19
CSHL1-210ENST00000561003 ERFEQ4G0M1 354 aa13.86□□□□□ -0.19
CSHL1-210ENST00000561003 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
CSHL1-210ENST00000561003 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
CSHL1-210ENST00000561003 KCPQ6ZWJ8 1503 aa13.85□□□□□ -0.19
CSHL1-210ENST00000561003 U2SURPO15042 1029 aaKnown RBP13.85□□□□□ -0.19
CSHL1-210ENST00000561003 PER1O15534 1290 aaPredicted RBP13.85□□□□□ -0.19
CSHL1-210ENST00000561003 HTRA3P83110 453 aa13.85□□□□□ -0.19
CSHL1-210ENST00000561003 RASSF7Q02833 373 aa13.85□□□□□ -0.19
CSHL1-210ENST00000561003 COL13A1Q5TAT6 717 aaPredicted RBP13.85□□□□□ -0.19
CSHL1-210ENST00000561003 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
CSHL1-210ENST00000561003 ZNF496Q96IT1 587 aaPredicted RBP13.85□□□□□ -0.19
CSHL1-210ENST00000561003 C21orf2O43822 256 aa13.84□□□□□ -0.19
CSHL1-210ENST00000561003 ST5P78524 1137 aa13.84□□□□□ -0.19
CSHL1-210ENST00000561003 CC2D1BQ5T0F9 858 aaKnown RBP13.84□□□□□ -0.19
CSHL1-210ENST00000561003 STYK1Q6J9G0 422 aa13.84□□□□□ -0.19
CSHL1-210ENST00000561003 CLEC4GQ6UXB4 293 aa13.84□□□□□ -0.19
CSHL1-210ENST00000561003 IL17REQ8NFR9 667 aa13.84□□□□□ -0.19
CSHL1-210ENST00000561003 TBC1D2BQ9UPU7 963 aa13.84□□□□□ -0.19
CSHL1-210ENST00000561003 NUDCQ9Y266 331 aa13.84□□□□□ -0.19
CSHL1-210ENST00000561003 NFKBIEO00221 500 aa13.83□□□□□ -0.2
CSHL1-210ENST00000561003 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
CSHL1-210ENST00000561003 CNBD1Q8NA66 436 aa13.83□□□□□ -0.2
CSHL1-210ENST00000561003 MASTLQ96GX5 879 aa13.83□□□□□ -0.2
CSHL1-210ENST00000561003 CFAP53Q96M91 514 aa13.83□□□□□ -0.2
CSHL1-210ENST00000561003 TAOK3Q9H2K8 898 aa13.83□□□□□ -0.2
CSHL1-210ENST00000561003 ZNF652Q9Y2D9 606 aa13.83□□□□□ -0.2
CSHL1-210ENST00000561003 ZNF330Q9Y3S2 320 aaPredicted RBP13.83□□□□□ -0.2
CSHL1-210ENST00000561003 IQCA1LA6NCM1 817 aa13.82□□□□□ -0.2
CSHL1-210ENST00000561003 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
CSHL1-210ENST00000561003 PRR5LQ6MZQ0 368 aa13.82□□□□□ -0.2
CSHL1-210ENST00000561003 CHADLQ6NUI6 762 aa13.82□□□□□ -0.2
CSHL1-210ENST00000561003 TPTE2Q6XPS3 522 aa13.82□□□□□ -0.2
CSHL1-210ENST00000561003 LTBP3Q9NS15 1303 aa13.82□□□□□ -0.2
CSHL1-210ENST00000561003 CARMIL3Q8ND23 1372 aa13.82□□□□□ -0.2
CSHL1-210ENST00000561003 HEG1Q9ULI3 1381 aa13.82□□□□□ -0.2
CSHL1-210ENST00000561003 N4BP2Q86UW6 1770 aaPredicted RBP13.81□□□□□ -0.2
CSHL1-210ENST00000561003 RGL2O15211 777 aa13.81□□□□□ -0.2
CSHL1-210ENST00000561003 RTF1Q92541 710 aaKnown RBP13.81□□□□□ -0.2
CSHL1-210ENST00000561003 KIF7Q2M1P5 1343 aa13.81□□□□□ -0.2
CSHL1-210ENST00000561003 MYH14Q7Z406 1995 aaKnown RBP13.8□□□□□ -0.2
CSHL1-210ENST00000561003 SNRPA1P09661 255 aaKnown RBP13.8□□□□□ -0.2
CSHL1-210ENST00000561003 SRGNP10124 158 aa13.8□□□□□ -0.2
CSHL1-210ENST00000561003 PRELPP51888 382 aa13.8□□□□□ -0.2
CSHL1-210ENST00000561003 DZIP3Q86Y13 1208 aaKnown RBP13.8□□□□□ -0.2
CSHL1-210ENST00000561003 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
CSHL1-210ENST00000561003 ZNF219Q9P2Y4 722 aaPredicted RBP13.8□□□□□ -0.2
CSHL1-210ENST00000561003 POTECB2RU33 542 aa13.79□□□□□ -0.2
CSHL1-210ENST00000561003 A1BGP04217 495 aa13.79□□□□□ -0.2
CSHL1-210ENST00000561003 NBPF5PQ86XG9 351 aaPredicted RBP13.79□□□□□ -0.2
CSHL1-210ENST00000561003 RTKN2Q8IZC4 609 aa13.79□□□□□ -0.2
CSHL1-210ENST00000561003 NPC1L1Q9UHC9 1359 aa13.79□□□□□ -0.2
CSHL1-210ENST00000561003 COL5A3P25940 1745 aaPredicted RBP13.78□□□□□ -0.2
CSHL1-210ENST00000561003 CAMTA2O94983 1202 aa13.78□□□□□ -0.2
CSHL1-210ENST00000561003 HSPA1AP0DMV8 641 aaKnown RBP13.78□□□□□ -0.2
CSHL1-210ENST00000561003 HSPA1BP0DMV9 641 aaKnown RBP13.78□□□□□ -0.2
CSHL1-210ENST00000561003 NPR1P16066 1061 aa13.78□□□□□ -0.2
CSHL1-210ENST00000561003 ALDH1B1P30837 517 aa13.78□□□□□ -0.2
CSHL1-210ENST00000561003 HTATSF1O43719 755 aaKnown RBP13.77□□□□□ -0.21
CSHL1-210ENST00000561003 GTF2E1P29083 439 aaPredicted RBP13.77□□□□□ -0.21
CSHL1-210ENST00000561003 CCDC93Q567U6 631 aa13.77□□□□□ -0.21
CSHL1-210ENST00000561003 PRPF40BQ6NWY9 871 aaKnown RBP13.77□□□□□ -0.21
CSHL1-210ENST00000561003 KIAA1551Q9HCM1 1747 aa13.77□□□□□ -0.21
CSHL1-210ENST00000561003 MRC1P22897 1456 aa13.76□□□□□ -0.21
CSHL1-210ENST00000561003 DDNO94850 711 aaPredicted RBP13.76□□□□□ -0.21
CSHL1-210ENST00000561003 GRIPAP1Q4V328 841 aa13.76□□□□□ -0.21
CSHL1-210ENST00000561003 PNMA8AQ86V59 439 aaPredicted RBP13.76□□□□□ -0.21
CSHL1-210ENST00000561003 LDHDQ86WU2 507 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms