RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 TBC1D9Q6ZT07 1266 aa8.15□□□□□ -1.1
AP4E1-203ENST00000560508 SMTNL1A8MU46 457 aa8.15□□□□□ -1.1
AP4E1-203ENST00000560508 CDC42BPAQ5VT25 1732 aa8.15□□□□□ -1.1
AP4E1-203ENST00000560508 CCDC83Q8IWF9 413 aa8.15□□□□□ -1.1
AP4E1-203ENST00000560508 CCAR1Q8IX12 1150 aaKnown RBP8.15□□□□□ -1.1
AP4E1-203ENST00000560508 IFNL2Q8IZJ0 200 aa8.15□□□□□ -1.1
AP4E1-203ENST00000560508 ZFYVE16Q7Z3T8 1539 aa8.15□□□□□ -1.1
AP4E1-203ENST00000560508 A0A1W2PP64 1363 aa8.15□□□□□ -1.1
AP4E1-203ENST00000560508 ATP2B1P20020 1258 aa8.15□□□□□ -1.1
AP4E1-203ENST00000560508 TEX13AQ9BXU3 409 aaPredicted RBP8.15□□□□□ -1.1
AP4E1-203ENST00000560508 BOLA2Q9H3K6 86 aa8.15□□□□□ -1.1
AP4E1-203ENST00000560508 SPINK5Q9NQ38 1064 aaPredicted RBP8.15□□□□□ -1.11
AP4E1-203ENST00000560508 KDM6BO15054 1643 aa8.15□□□□□ -1.11
AP4E1-203ENST00000560508 IFIT5Q13325 482 aaKnown RBP8.14□□□□□ -1.11
AP4E1-203ENST00000560508 CAVIN4Q5BKX8 364 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 ERCC4Q92889 916 aaPredicted RBP8.14□□□□□ -1.11
AP4E1-203ENST00000560508 TESK2Q96S53 571 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 FAM83GA6ND36 823 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 IDH1O75874 414 aaKnown RBP8.14□□□□□ -1.11
AP4E1-203ENST00000560508 CCDC183Q5T5S1 534 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 BRPF3Q9ULD4 1205 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 MSH6P52701 1360 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 NPC1L1Q9UHC9 1359 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 ANKRD18BA2A2Z9 1011 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 HMGN5P82970 282 aaKnown RBP8.14□□□□□ -1.11
AP4E1-203ENST00000560508 KRT18P05783 430 aaKnown RBP8.14□□□□□ -1.11
AP4E1-203ENST00000560508 MAP3K11Q16584 847 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 PPFIBP1Q86W92 1011 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 CEP57L1Q8IYX8 460 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 TBC1D2Q9BYX2 928 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 CWC25Q9NXE8 425 aaPredicted RBP8.14□□□□□ -1.11
AP4E1-203ENST00000560508 CDR1P51861 262 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 TBC1D32Q96NH3 1257 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 MYO6Q9UM54 1294 aa8.14□□□□□ -1.11
AP4E1-203ENST00000560508 TTC37Q6PGP7 1564 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 INSRP06213 1382 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 PIP4K2BP78356 416 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 TXLNBQ8N3L3 684 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 ZNF287Q9HBT7 754 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 BLMP54132 1417 aaPredicted RBP8.13□□□□□ -1.11
AP4E1-203ENST00000560508 EDC4Q6P2E9 1401 aaKnown RBP8.13□□□□□ -1.11
AP4E1-203ENST00000560508 FOXO3O43524 673 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 TTF1Q15361 905 aaPredicted RBP8.13□□□□□ -1.11
AP4E1-203ENST00000560508 ZNHIT6Q9NWK9 470 aaKnown RBP8.13□□□□□ -1.11
AP4E1-203ENST00000560508 LIMCH1Q9UPQ0 1083 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 FLT4P35916 1363 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 ZPR1O75312 459 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 OFD1O75665 1012 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 PTCD1O75127 700 aaKnown RBP8.13□□□□□ -1.11
AP4E1-203ENST00000560508 ATP2B2Q01814 1243 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 CT47A1Q5JQC4 288 aaPredicted RBP8.13□□□□□ -1.11
AP4E1-203ENST00000560508 SKAP1Q86WV1 359 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 KLHL34Q8N239 644 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 CCDC8Q9H0W5 538 aaPredicted RBP8.13□□□□□ -1.11
AP4E1-203ENST00000560508 MAP3K5Q99683 1374 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 AKAP4Q5JQC9 854 aa8.13□□□□□ -1.11
AP4E1-203ENST00000560508 MAP3K12Q12852 859 aa8.12□□□□□ -1.11
AP4E1-203ENST00000560508 NEO1Q92859 1461 aa8.12□□□□□ -1.11
AP4E1-203ENST00000560508 SNRPA1P09661 255 aaKnown RBP8.12□□□□□ -1.11
AP4E1-203ENST00000560508 BRPF1P55201 1214 aaPredicted RBP8.12□□□□□ -1.11
AP4E1-203ENST00000560508 EIF4A2Q14240 407 aaKnown RBP8.12□□□□□ -1.11
AP4E1-203ENST00000560508 TSPOAP1O95153 1857 aa8.12□□□□□ -1.11
AP4E1-203ENST00000560508 CCDC85AQ96PX6 553 aaPredicted RBP8.12□□□□□ -1.11
AP4E1-203ENST00000560508 ECHDC1Q9NTX5 307 aa8.12□□□□□ -1.11
AP4E1-203ENST00000560508 A0A087WZG4 1122 aa8.12□□□□□ -1.11
AP4E1-203ENST00000560508 BICDL1Q6ZP65 573 aa8.12□□□□□ -1.11
AP4E1-203ENST00000560508 HMG20BQ9P0W2 317 aa8.12□□□□□ -1.11
AP4E1-203ENST00000560508 SOS1Q07889 1333 aaPredicted RBP8.12□□□□□ -1.11
AP4E1-203ENST00000560508 ODF2Q5BJF6 829 aa8.12□□□□□ -1.11
AP4E1-203ENST00000560508 SYCE3A1L190 88 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 ZNF213O14771 459 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 RBM5P52756 815 aaKnown RBP eCLIP8.11□□□□□ -1.11
AP4E1-203ENST00000560508 SF3B2Q13435 895 aaKnown RBP8.11□□□□□ -1.11
AP4E1-203ENST00000560508 DDX11Q96FC9 970 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 HSP90B2PQ58FF3 399 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 PPP1R42Q7Z4L9 355 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 HECW2Q9P2P5 1572 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 TET3O43151 1660 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 CCDC196A0A1B0GTZ2 297 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 TTLL5Q6EMB2 1281 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 SCAND2PQ9GZW5 306 aaPredicted RBP8.11□□□□□ -1.11
AP4E1-203ENST00000560508 NAPBQ9H115 298 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 PRM3Q9NNZ6 103 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 ZMYM3Q14202 1370 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 SSRP1Q08945 709 aaKnown RBP8.11□□□□□ -1.11
AP4E1-203ENST00000560508 TNPO1Q92973 898 aaKnown RBP8.11□□□□□ -1.11
AP4E1-203ENST00000560508 UPF3BQ9BZI7 483 aaKnown RBP8.11□□□□□ -1.11
AP4E1-203ENST00000560508 PHAXQ9H814 394 aaKnown RBP8.11□□□□□ -1.11
AP4E1-203ENST00000560508 LUC7LQ9NQ29 371 aaKnown RBP8.11□□□□□ -1.11
AP4E1-203ENST00000560508 POLKQ9UBT6 870 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 TRMT112Q9UI30 125 aaKnown RBP8.11□□□□□ -1.11
AP4E1-203ENST00000560508 SPHKAPQ2M3C7 1700 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 USP5P45974 858 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 CADPS2Q86UW7 1296 aa8.11□□□□□ -1.11
AP4E1-203ENST00000560508 CTAGE5O15320 804 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 HSP90AB2PQ58FF8 381 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 CHPF2Q9P2E5 772 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 IQGAP3Q86VI3 1631 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 ANKRD44Q8N8A2 993 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 RNF41Q9H4P4 317 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms