RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-208ENST00000560444 KSR2Q6VAB6 950 aa29.68■■■□□ 2.34
PIF1-208ENST00000560444 DDX58O95786 925 aaKnown RBP29.67■■■□□ 2.34
PIF1-208ENST00000560444 PDIA6Q15084 440 aa29.67■■■□□ 2.34
PIF1-208ENST00000560444 DDX54Q8TDD1 881 aaKnown RBP29.67■■■□□ 2.34
PIF1-208ENST00000560444 IPO9Q96P70 1041 aaKnown RBP29.67■■■□□ 2.34
PIF1-208ENST00000560444 ADCY9O60503 1353 aa29.66■■■□□ 2.34
PIF1-208ENST00000560444 ANXA1P04083 346 aa29.66■■■□□ 2.34
PIF1-208ENST00000560444 ZBTB47Q9UFB7 747 aaPredicted RBP29.66■■■□□ 2.34
PIF1-208ENST00000560444 UBTFL1P0CB47 393 aaPredicted RBP29.65■■■□□ 2.34
PIF1-208ENST00000560444 ATP8B2P98198 1209 aa29.65■■■□□ 2.34
PIF1-208ENST00000560444 PROSER3Q2NL68 480 aa29.65■■■□□ 2.34
PIF1-208ENST00000560444 SPATA31A6Q5VVP1 1343 aa29.65■■■□□ 2.34
PIF1-208ENST00000560444 ALDH1L1O75891 902 aa29.64■■■□□ 2.34
PIF1-208ENST00000560444 PLCH1Q4KWH8 1693 aa29.64■■■□□ 2.33
PIF1-208ENST00000560444 NPM2Q86SE8 214 aaKnown RBP29.63■■■□□ 2.33
PIF1-208ENST00000560444 USP35Q9P2H5 1018 aa29.63■■■□□ 2.33
PIF1-208ENST00000560444 MAP3K2Q9Y2U5 619 aa29.62■■■□□ 2.33
PIF1-208ENST00000560444 DISP2A7MBM2 1401 aa29.62■■■□□ 2.33
PIF1-208ENST00000560444 HDAC5Q9UQL6 1122 aa29.61■■■□□ 2.33
PIF1-208ENST00000560444 SHANK3Q9BYB0 1731 aa29.61■■■□□ 2.33
PIF1-208ENST00000560444 USP16Q9Y5T5 823 aa29.6■■■□□ 2.33
PIF1-208ENST00000560444 IBTKQ9P2D0 1353 aaPredicted RBP29.6■■■□□ 2.33
PIF1-208ENST00000560444 C8orf37Q96NL8 207 aa29.6■■■□□ 2.33
PIF1-208ENST00000560444 LRRFIP2Q9Y608 721 aaKnown RBP29.6■■■□□ 2.33
PIF1-208ENST00000560444 LRP6O75581 1613 aa29.59■■■□□ 2.33
PIF1-208ENST00000560444 ERBB4Q15303 1308 aa29.59■■■□□ 2.33
PIF1-208ENST00000560444 MSH5O43196 834 aa29.59■■■□□ 2.33
PIF1-208ENST00000560444 BMP2KLQ5H9B9 411 aa29.59■■■□□ 2.33
PIF1-208ENST00000560444 NGLY1Q96IV0 654 aa29.58■■■□□ 2.33
PIF1-208ENST00000560444 CDCA7Q9BWT1 371 aaPredicted RBP29.58■■■□□ 2.33
PIF1-208ENST00000560444 C5P01031 1676 aa29.58■■■□□ 2.33
PIF1-208ENST00000560444 LINS1Q8NG48 757 aa29.57■■■□□ 2.32
PIF1-208ENST00000560444 SLIT2O94813 1529 aa29.57■■■□□ 2.32
PIF1-208ENST00000560444 DDRGK1Q96HY6 314 aa29.56■■■□□ 2.32
PIF1-208ENST00000560444 THRAP3Q9Y2W1 955 aaKnown RBP29.56■■■□□ 2.32
PIF1-208ENST00000560444 NRAPQ86VF7 1730 aa29.55■■■□□ 2.32
PIF1-208ENST00000560444 LRP10Q7Z4F1 713 aa29.55■■■□□ 2.32
PIF1-208ENST00000560444 TMOD3Q9NYL9 352 aa29.55■■■□□ 2.32
PIF1-208ENST00000560444 EXOC5O00471 708 aa29.54■■■□□ 2.32
PIF1-208ENST00000560444 UPF2Q9HAU5 1272 aaKnown RBP29.54■■■□□ 2.32
PIF1-208ENST00000560444 TNS2Q63HR2 1409 aa29.53■■■□□ 2.32
PIF1-208ENST00000560444 MYL6BP14649 208 aa29.53■■■□□ 2.32
PIF1-208ENST00000560444 AIMP1Q12904 312 aaKnown RBP29.53■■■□□ 2.32
PIF1-208ENST00000560444 RIC3Q7Z5B4 369 aa29.53■■■□□ 2.32
PIF1-208ENST00000560444 SSH3Q8TE77 659 aa29.53■■■□□ 2.32
PIF1-208ENST00000560444 XAGE3Q8WTP9 111 aa29.53■■■□□ 2.32
PIF1-208ENST00000560444 COPS6Q7L5N1 327 aa29.53■■■□□ 2.32
PIF1-208ENST00000560444 PLEKHM2Q8IWE5 1019 aa29.53■■■□□ 2.32
PIF1-208ENST00000560444 PAPPAQ13219 1627 aa29.52■■■□□ 2.32
PIF1-208ENST00000560444 NWD2Q9ULI1 1742 aa29.52■■■□□ 2.32
PIF1-208ENST00000560444 PNMA6EA0A0J9YXQ4 647 aa29.52■■■□□ 2.32
PIF1-208ENST00000560444 SEC24BO95487 1268 aa29.52■■■□□ 2.32
PIF1-208ENST00000560444 NBPF7P0C2Y1 421 aaPredicted RBP29.52■■■□□ 2.32
PIF1-208ENST00000560444 MEX3CQ5U5Q3 659 aaKnown RBP29.52■■■□□ 2.32
PIF1-208ENST00000560444 GLI3P10071 1580 aa29.51■■■□□ 2.31
PIF1-208ENST00000560444 NEXNQ0ZGT2 675 aa29.51■■■□□ 2.31
PIF1-208ENST00000560444 C9orf78Q9NZ63 289 aaPredicted RBP29.51■■■□□ 2.31
PIF1-208ENST00000560444 KCPQ6ZWJ8 1503 aa29.51■■■□□ 2.31
PIF1-208ENST00000560444 POLA2Q14181 598 aa29.5■■■□□ 2.31
PIF1-208ENST00000560444 ANKRD13DQ6ZTN6 518 aa29.5■■■□□ 2.31
PIF1-208ENST00000560444 UBR2Q8IWV8 1755 aa29.5■■■□□ 2.31
PIF1-208ENST00000560444 UTYO14607 1347 aa29.5■■■□□ 2.31
PIF1-208ENST00000560444 METTL22Q9BUU2 404 aaPredicted RBP29.49■■■□□ 2.31
PIF1-208ENST00000560444 CCDC9Q9Y3X0 531 aaKnown RBP29.49■■■□□ 2.31
PIF1-208ENST00000560444 SPATA31A1Q5TZJ5 1347 aa29.49■■■□□ 2.31
PIF1-208ENST00000560444 LAMB4A4D0S4 1761 aa29.49■■■□□ 2.31
PIF1-208ENST00000560444 UNC5CLQ8IV45 518 aa29.49■■■□□ 2.31
PIF1-208ENST00000560444 PPP1R42Q7Z4L9 355 aa29.48■■■□□ 2.31
PIF1-208ENST00000560444 MTX1Q13505 466 aa29.47■■■□□ 2.31
PIF1-208ENST00000560444 VSIG10Q8N0Z9 540 aa29.47■■■□□ 2.31
PIF1-208ENST00000560444 FNBP4Q8N3X1 1017 aaPredicted RBP29.47■■■□□ 2.31
PIF1-208ENST00000560444 TEX13AQ9BXU3 409 aaPredicted RBP29.47■■■□□ 2.31
PIF1-208ENST00000560444 LRRCC1Q9C099 1032 aa29.47■■■□□ 2.31
PIF1-208ENST00000560444 NOP58Q9Y2X3 529 aaKnown RBP29.47■■■□□ 2.31
PIF1-208ENST00000560444 RAB11FIP3O75154 756 aa29.46■■■□□ 2.31
PIF1-208ENST00000560444 BCL9LQ86UU0 1499 aa29.46■■■□□ 2.31
PIF1-208ENST00000560444 GRM8O00222 908 aa29.45■■■□□ 2.31
PIF1-208ENST00000560444 CWF19L2Q2TBE0 894 aaKnown RBP29.45■■■□□ 2.31
PIF1-208ENST00000560444 C16orf71Q8IYS4 520 aaPredicted RBP29.45■■■□□ 2.31
PIF1-208ENST00000560444 PIGBQ92521 554 aa29.45■■■□□ 2.3
PIF1-208ENST00000560444 EXOC6BQ9Y2D4 811 aa29.45■■■□□ 2.3
PIF1-208ENST00000560444 SPATA31A5Q5VU36 1347 aa29.45■■■□□ 2.3
PIF1-208ENST00000560444 SPATA31A7Q8IWB4 1347 aa29.45■■■□□ 2.3
PIF1-208ENST00000560444 TOGARAM1Q9Y4F4 1720 aa29.44■■■□□ 2.3
PIF1-208ENST00000560444 SMARCA5O60264 1052 aaPredicted RBP29.44■■■□□ 2.3
PIF1-208ENST00000560444 EIF5BO60841 1220 aaKnown RBP29.44■■■□□ 2.3
PIF1-208ENST00000560444 PTCD1O75127 700 aaKnown RBP29.44■■■□□ 2.3
PIF1-208ENST00000560444 PLBD2Q8NHP8 589 aa29.44■■■□□ 2.3
PIF1-208ENST00000560444 SRGAP3O43295 1099 aa29.43■■■□□ 2.3
PIF1-208ENST00000560444 IGKV5-2P06315 115 aa29.43■■■□□ 2.3
PIF1-208ENST00000560444 TTC22Q5TAA0 569 aa29.43■■■□□ 2.3
PIF1-208ENST00000560444 OSBPL3Q9H4L5 887 aa29.43■■■□□ 2.3
PIF1-208ENST00000560444 USP21Q9UK80 565 aa29.43■■■□□ 2.3
PIF1-208ENST00000560444 NEURL1BA8MQ27 555 aa29.42■■■□□ 2.3
PIF1-208ENST00000560444 APBB1O00213 710 aa29.42■■■□□ 2.3
PIF1-208ENST00000560444 HSP90AB4PQ58FF6 505 aa29.42■■■□□ 2.3
PIF1-208ENST00000560444 NBPF26B4DH59 902 aa29.42■■■□□ 2.3
PIF1-208ENST00000560444 NBPF14Q5TI25 921 aa29.42■■■□□ 2.3
PIF1-208ENST00000560444 NBPF10Q6P3W6 841 aaKnown RBP29.42■■■□□ 2.3
PIF1-208ENST00000560444 NBPF15Q8N660 670 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms