RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 KIF1BO60333 1816 aa8.7□□□□□ -1.02
CLPX-206ENST00000560166 TMEM131LA2VDJ0 1609 aa8.7□□□□□ -1.02
CLPX-206ENST00000560166 RXRBP28702 533 aa8.7□□□□□ -1.02
CLPX-206ENST00000560166 PIK3C2GO75747 1445 aa8.7□□□□□ -1.02
CLPX-206ENST00000560166 NEXMIFQ5QGS0 1516 aa8.7□□□□□ -1.02
CLPX-206ENST00000560166 KIAA1210Q9ULL0 1709 aa8.69□□□□□ -1.02
CLPX-206ENST00000560166 CCDC24Q8N4L8 307 aa8.69□□□□□ -1.02
CLPX-206ENST00000560166 ROCK2O75116 1388 aaKnown RBP8.69□□□□□ -1.02
CLPX-206ENST00000560166 TMEM94Q12767 1356 aa8.69□□□□□ -1.02
CLPX-206ENST00000560166 TRPM1Q7Z4N2 1603 aa8.69□□□□□ -1.02
CLPX-206ENST00000560166 PHLPP1O60346 1717 aa8.68□□□□□ -1.02
CLPX-206ENST00000560166 IFT172Q9UG01 1749 aa8.68□□□□□ -1.02
CLPX-206ENST00000560166 TXNDC2Q86VQ3 553 aa8.68□□□□□ -1.02
CLPX-206ENST00000560166 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.68□□□□□ -1.02
CLPX-206ENST00000560166 SCAF11Q99590 1463 aaKnown RBP8.68□□□□□ -1.02
CLPX-206ENST00000560166 SETBP1Q9Y6X0 1596 aa8.68□□□□□ -1.02
CLPX-206ENST00000560166 XIRP1Q702N8 1843 aaKnown RBP8.68□□□□□ -1.02
CLPX-206ENST00000560166 NUTM2BA6NNL0 878 aaPredicted RBP8.67□□□□□ -1.02
CLPX-206ENST00000560166 NUTM2EB1AL46 878 aaPredicted RBP8.67□□□□□ -1.02
CLPX-206ENST00000560166 GDF11O95390 407 aa8.67□□□□□ -1.02
CLPX-206ENST00000560166 CLCN1P35523 988 aa8.67□□□□□ -1.02
CLPX-206ENST00000560166 MDM2Q00987 491 aaPredicted RBP8.67□□□□□ -1.02
CLPX-206ENST00000560166 RASSF7Q02833 373 aa8.67□□□□□ -1.02
CLPX-206ENST00000560166 ZNF326Q5BKZ1 582 aaKnown RBP8.67□□□□□ -1.02
CLPX-206ENST00000560166 NUTM2DQ5VT03 806 aaPredicted RBP8.67□□□□□ -1.02
CLPX-206ENST00000560166 PROSER2Q86WR7 435 aaPredicted RBP8.67□□□□□ -1.02
CLPX-206ENST00000560166 NUTM2AQ8IVF1 878 aaPredicted RBP8.67□□□□□ -1.02
CLPX-206ENST00000560166 USP47Q96K76 1375 aa8.67□□□□□ -1.02
CLPX-206ENST00000560166 PCMTD1Q96MG8 357 aaPredicted RBP8.67□□□□□ -1.02
CLPX-206ENST00000560166 CARD11Q9BXL7 1154 aa8.67□□□□□ -1.02
CLPX-206ENST00000560166 GOPCQ9HD26 462 aa8.67□□□□□ -1.02
CLPX-206ENST00000560166 EID1Q9Y6B2 187 aa8.67□□□□□ -1.02
CLPX-206ENST00000560166 WASF2Q9Y6W5 498 aa8.67□□□□□ -1.02
CLPX-206ENST00000560166 NLRP7Q8WX94 980 aa8.66□□□□□ -1.02
CLPX-206ENST00000560166 PHOX2BQ99453 314 aa8.66□□□□□ -1.02
CLPX-206ENST00000560166 C14orf93Q9H972 538 aaKnown RBP8.66□□□□□ -1.02
CLPX-206ENST00000560166 PPLO60437 1756 aa8.66□□□□□ -1.02
CLPX-206ENST00000560166 LRP6O75581 1613 aa8.65□□□□□ -1.02
CLPX-206ENST00000560166 SLIT1O75093 1534 aa8.65□□□□□ -1.02
CLPX-206ENST00000560166 ARHGAP23Q9P227 1491 aa8.65□□□□□ -1.02
CLPX-206ENST00000560166 RIMS2Q9UQ26 1411 aa8.65□□□□□ -1.02
CLPX-206ENST00000560166 EIF3AQ14152 1382 aaKnown RBP8.65□□□□□ -1.02
CLPX-206ENST00000560166 TMEM2Q9UHN6 1383 aa8.65□□□□□ -1.02
CLPX-206ENST00000560166 ADGRF5Q8IZF2 1346 aa8.65□□□□□ -1.02
CLPX-206ENST00000560166 HSPA5P11021 654 aaKnown RBP8.65□□□□□ -1.02
CLPX-206ENST00000560166 LTKP29376 864 aa8.65□□□□□ -1.02
CLPX-206ENST00000560166 FLIIQ13045 1269 aa8.65□□□□□ -1.02
CLPX-206ENST00000560166 GPCPD1Q9NPB8 672 aa8.65□□□□□ -1.02
CLPX-206ENST00000560166 MSH6P52701 1360 aa8.64□□□□□ -1.03
CLPX-206ENST00000560166 SPATA31A6Q5VVP1 1343 aa8.64□□□□□ -1.03
CLPX-206ENST00000560166 EHBP1Q8NDI1 1231 aa8.64□□□□□ -1.03
CLPX-206ENST00000560166 SBNO2Q9Y2G9 1366 aa8.63□□□□□ -1.03
CLPX-206ENST00000560166 SSTR3P32745 418 aaPredicted RBP8.63□□□□□ -1.03
CLPX-206ENST00000560166 ARID3AQ99856 593 aa8.63□□□□□ -1.03
CLPX-206ENST00000560166 SLAIN2Q9P270 581 aa8.63□□□□□ -1.03
CLPX-206ENST00000560166 ADGRB1O14514 1584 aa8.63□□□□□ -1.03
CLPX-206ENST00000560166 KCNA6P17658 529 aa8.62□□□□□ -1.03
CLPX-206ENST00000560166 NBPF1Q3BBV0 1214 aa8.62□□□□□ -1.03
CLPX-206ENST00000560166 SH3D19Q5HYK7 790 aa8.62□□□□□ -1.03
CLPX-206ENST00000560166 SLC26A8Q96RN1 970 aa8.62□□□□□ -1.03
CLPX-206ENST00000560166 UBR1Q8IWV7 1749 aa8.62□□□□□ -1.03
CLPX-206ENST00000560166 PLEKHG1Q9ULL1 1385 aa8.61□□□□□ -1.03
CLPX-206ENST00000560166 AFF2P51816 1311 aa8.61□□□□□ -1.03
CLPX-206ENST00000560166 CDK12Q9NYV4 1490 aaPredicted RBP8.6□□□□□ -1.03
CLPX-206ENST00000560166 CFAP70Q5T0N1 1121 aa8.6□□□□□ -1.03
CLPX-206ENST00000560166 PTCRAQ6ISU1 281 aaPredicted RBP8.6□□□□□ -1.03
CLPX-206ENST00000560166 MRPL14Q6P1L8 145 aaKnown RBP8.6□□□□□ -1.03
CLPX-206ENST00000560166 BEGAINQ9BUH8 593 aa8.6□□□□□ -1.03
CLPX-206ENST00000560166 C1orf115Q9H7X2 142 aa8.6□□□□□ -1.03
CLPX-206ENST00000560166 COL16A1Q07092 1604 aaPredicted RBP8.6□□□□□ -1.03
CLPX-206ENST00000560166 RGS12O14924 1447 aa8.6□□□□□ -1.03
CLPX-206ENST00000560166 CCDC7Q96M83 1385 aa8.6□□□□□ -1.03
CLPX-206ENST00000560166 SCARF1Q14162 830 aa8.59□□□□□ -1.03
CLPX-206ENST00000560166 DIEXFQ68CQ4 756 aaKnown RBP8.59□□□□□ -1.03
CLPX-206ENST00000560166 C8orf37Q96NL8 207 aa8.59□□□□□ -1.03
CLPX-206ENST00000560166 DIP2AQ14689 1571 aa8.59□□□□□ -1.03
CLPX-206ENST00000560166 DLC1Q96QB1 1528 aa8.59□□□□□ -1.03
CLPX-206ENST00000560166 TECPR2O15040 1411 aa8.58□□□□□ -1.04
CLPX-206ENST00000560166 ST20-MTHFSA0A0A6YYL1 179 aa8.58□□□□□ -1.04
CLPX-206ENST00000560166 RNF225M0QZC1 329 aaPredicted RBP8.58□□□□□ -1.04
CLPX-206ENST00000560166 CD46P15529 392 aa8.58□□□□□ -1.04
CLPX-206ENST00000560166 SKIV2LQ15477 1246 aaKnown RBP8.58□□□□□ -1.04
CLPX-206ENST00000560166 CDCA8Q53HL2 280 aa8.58□□□□□ -1.04
CLPX-206ENST00000560166 SIRT1Q96EB6 747 aa8.58□□□□□ -1.04
CLPX-206ENST00000560166 TESK2Q96S53 571 aa8.58□□□□□ -1.04
CLPX-206ENST00000560166 QTRT2Q9H974 415 aaKnown RBP8.58□□□□□ -1.04
CLPX-206ENST00000560166 FAM217BQ9NTX9 383 aaPredicted RBP8.58□□□□□ -1.04
CLPX-206ENST00000560166 ASXL1Q8IXJ9 1541 aa8.58□□□□□ -1.04
CLPX-206ENST00000560166 LRPPRCP42704 1394 aaKnown RBP8.58□□□□□ -1.04
CLPX-206ENST00000560166 ATAD2Q6PL18 1390 aa8.58□□□□□ -1.04
CLPX-206ENST00000560166 CFAP65Q6ZU64 1925 aaKnown RBP8.58□□□□□ -1.04
CLPX-206ENST00000560166 ABCC11Q96J66 1382 aa8.58□□□□□ -1.04
CLPX-206ENST00000560166 PIK3R4Q99570 1358 aa8.58□□□□□ -1.04
CLPX-206ENST00000560166 WASHC2AQ641Q2 1341 aa8.57□□□□□ -1.04
CLPX-206ENST00000560166 SOBPA7XYQ1 873 aa8.57□□□□□ -1.04
CLPX-206ENST00000560166 APBB1O00213 710 aa8.57□□□□□ -1.04
CLPX-206ENST00000560166 KDM4AO75164 1064 aa8.57□□□□□ -1.04
CLPX-206ENST00000560166 JUNDP17535 347 aa8.57□□□□□ -1.04
CLPX-206ENST00000560166 SH3BP2P78314 561 aa8.57□□□□□ -1.04
CLPX-206ENST00000560166 RBM6P78332 1123 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms