RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 USPL1Q5W0Q7 1092 aa27.26■■□□□ 1.95
CHRNA3-207ENST00000559941 TEX13AQ9BXU3 409 aaPredicted RBP27.26■■□□□ 1.95
CHRNA3-207ENST00000559941 RTF1Q92541 710 aaKnown RBP27.25■■□□□ 1.95
CHRNA3-207ENST00000559941 NARFQ9UHQ1 456 aa27.25■■□□□ 1.95
CHRNA3-207ENST00000559941 WWC3Q9ULE0 1092 aa27.25■■□□□ 1.95
CHRNA3-207ENST00000559941 BTBD11A6QL63 1104 aa27.24■■□□□ 1.95
CHRNA3-207ENST00000559941 HTATSF1O43719 755 aaKnown RBP27.24■■□□□ 1.95
CHRNA3-207ENST00000559941 TM4SF1P30408 202 aa27.24■■□□□ 1.95
CHRNA3-207ENST00000559941 DDR1Q08345 913 aa27.24■■□□□ 1.95
CHRNA3-207ENST00000559941 FMNL2Q96PY5 1086 aa27.24■■□□□ 1.95
CHRNA3-207ENST00000559941 DLG5Q8TDM6 1919 aa27.24■■□□□ 1.95
CHRNA3-207ENST00000559941 CANXP27824 592 aaKnown RBP27.23■■□□□ 1.95
CHRNA3-207ENST00000559941 MCM10Q7L590 875 aa27.23■■□□□ 1.95
CHRNA3-207ENST00000559941 BRCA1P38398 1863 aaKnown RBP27.23■■□□□ 1.95
CHRNA3-207ENST00000559941 A0A0G2JLW4 131 aa27.22■■□□□ 1.95
CHRNA3-207ENST00000559941 KCNQ3O43525 872 aa27.22■■□□□ 1.95
CHRNA3-207ENST00000559941 EIF5P55010 431 aaKnown RBP27.21■■□□□ 1.95
CHRNA3-207ENST00000559941 POLRMTO00411 1230 aaKnown RBP27.2■■□□□ 1.94
CHRNA3-207ENST00000559941 RALBP1Q15311 655 aa27.2■■□□□ 1.94
CHRNA3-207ENST00000559941 AFDNP55196 1824 aaKnown RBP27.2■■□□□ 1.94
CHRNA3-207ENST00000559941 NEFMP07197 916 aa27.19■■□□□ 1.94
CHRNA3-207ENST00000559941 DPEP1P16444 411 aa27.19■■□□□ 1.94
CHRNA3-207ENST00000559941 DDX10Q13206 875 aaKnown RBP27.19■■□□□ 1.94
CHRNA3-207ENST00000559941 DCTN1Q14203 1278 aa27.19■■□□□ 1.94
CHRNA3-207ENST00000559941 BCL2L12Q9HB09 334 aa27.19■■□□□ 1.94
CHRNA3-207ENST00000559941 A0A087WZG4 1122 aa27.18■■□□□ 1.94
CHRNA3-207ENST00000559941 PLEKHF1Q96S99 279 aa27.18■■□□□ 1.94
CHRNA3-207ENST00000559941 NRXN2Q9P2S2 1712 aa27.16■■□□□ 1.94
CHRNA3-207ENST00000559941 KCNA3P22001 575 aa27.16■■□□□ 1.94
CHRNA3-207ENST00000559941 NFIXQ14938 502 aa27.16■■□□□ 1.94
CHRNA3-207ENST00000559941 IL6STP40189 918 aaPredicted RBP27.15■■□□□ 1.94
CHRNA3-207ENST00000559941 PNNQ9H307 717 aaKnown RBP27.15■■□□□ 1.94
CHRNA3-207ENST00000559941 BCS1LQ9Y276 419 aa27.15■■□□□ 1.94
CHRNA3-207ENST00000559941 ARFGEF1Q9Y6D6 1849 aa27.14■■□□□ 1.94
CHRNA3-207ENST00000559941 A1BGP04217 495 aa27.14■■□□□ 1.94
CHRNA3-207ENST00000559941 TAF7Q15545 349 aaPredicted RBP27.14■■□□□ 1.94
CHRNA3-207ENST00000559941 USP16Q9Y5T5 823 aa27.13■■□□□ 1.93
CHRNA3-207ENST00000559941 SCN7AQ01118 1682 aa27.12■■□□□ 1.93
CHRNA3-207ENST00000559941 ADCY9O60503 1353 aa27.11■■□□□ 1.93
CHRNA3-207ENST00000559941 ATP10DQ9P241 1426 aa27.11■■□□□ 1.93
CHRNA3-207ENST00000559941 SNRPA1P09661 255 aaKnown RBP27.11■■□□□ 1.93
CHRNA3-207ENST00000559941 NFE2L2Q16236 605 aa27.11■■□□□ 1.93
CHRNA3-207ENST00000559941 PIM2Q9P1W9 311 aa27.11■■□□□ 1.93
CHRNA3-207ENST00000559941 SERPINB2P05120 415 aa27.1■■□□□ 1.93
CHRNA3-207ENST00000559941 ZNF330Q9Y3S2 320 aaPredicted RBP27.1■■□□□ 1.93
CHRNA3-207ENST00000559941 PRAMEF22A3QJZ6 481 aa27.09■■□□□ 1.93
CHRNA3-207ENST00000559941 NPM2Q86SE8 214 aaKnown RBP27.09■■□□□ 1.93
CHRNA3-207ENST00000559941 TBC1D2BQ9UPU7 963 aa27.09■■□□□ 1.93
CHRNA3-207ENST00000559941 MAPK8IP3Q9UPT6 1336 aa27.09■■□□□ 1.93
CHRNA3-207ENST00000559941 KDM3BQ7LBC6 1761 aa27.08■■□□□ 1.93
CHRNA3-207ENST00000559941 CHRNA5P30532 468 aa27.08■■□□□ 1.93
CHRNA3-207ENST00000559941 MYBBP1AQ9BQG0 1328 aaKnown RBP27.08■■□□□ 1.93
CHRNA3-207ENST00000559941 BCORQ6W2J9 1755 aa27.07■■□□□ 1.92
CHRNA3-207ENST00000559941 TBC1D9BQ66K14 1250 aa27.06■■□□□ 1.92
CHRNA3-207ENST00000559941 BICDL1Q6ZP65 573 aa27.06■■□□□ 1.92
CHRNA3-207ENST00000559941 PNISRQ8TF01 805 aaKnown RBP27.06■■□□□ 1.92
CHRNA3-207ENST00000559941 MIS18AQ9NYP9 233 aa27.06■■□□□ 1.92
CHRNA3-207ENST00000559941 GIGYF1O75420 1035 aaPredicted RBP27.05■■□□□ 1.92
CHRNA3-207ENST00000559941 CAMTA2O94983 1202 aa27.05■■□□□ 1.92
CHRNA3-207ENST00000559941 DALRD3Q5D0E6 543 aaKnown RBP27.05■■□□□ 1.92
CHRNA3-207ENST00000559941 ARHGAP27Q6ZUM4 889 aa27.05■■□□□ 1.92
CHRNA3-207ENST00000559941 DLEC1Q9Y238 1755 aa27.04■■□□□ 1.92
CHRNA3-207ENST00000559941 C1QTNF8P60827 252 aa27.04■■□□□ 1.92
CHRNA3-207ENST00000559941 LAMB4A4D0S4 1761 aa27.04■■□□□ 1.92
CHRNA3-207ENST00000559941 PIP4K2AP48426 406 aaPredicted RBP27.03■■□□□ 1.92
CHRNA3-207ENST00000559941 DZIP3Q86Y13 1208 aaKnown RBP27.03■■□□□ 1.92
CHRNA3-207ENST00000559941 THUMPD2Q9BTF0 503 aaKnown RBP27.02■■□□□ 1.92
CHRNA3-207ENST00000559941 ANKRD31Q8N7Z5 1873 aa27.01■■□□□ 1.91
CHRNA3-207ENST00000559941 CARMIL3Q8ND23 1372 aa27■■□□□ 1.91
CHRNA3-207ENST00000559941 NBPF26B4DH59 902 aa27■■□□□ 1.91
CHRNA3-207ENST00000559941 NBPF10Q6P3W6 841 aaKnown RBP27■■□□□ 1.91
CHRNA3-207ENST00000559941 NBPF15Q8N660 670 aa27■■□□□ 1.91
CHRNA3-207ENST00000559941 GPBP1L1Q9HC44 474 aaPredicted RBP27■■□□□ 1.91
CHRNA3-207ENST00000559941 RIPK4P57078 832 aa26.98■■□□□ 1.91
CHRNA3-207ENST00000559941 EIF4A1P60842 406 aaKnown RBP26.98■■□□□ 1.91
CHRNA3-207ENST00000559941 SETDB2Q96T68 719 aa26.98■■□□□ 1.91
CHRNA3-207ENST00000559941 PRR5LQ6MZQ0 368 aa26.97■■□□□ 1.91
CHRNA3-207ENST00000559941 CLEC4GQ6UXB4 293 aa26.97■■□□□ 1.91
CHRNA3-207ENST00000559941 SBF1O95248 1867 aa26.96■■□□□ 1.91
CHRNA3-207ENST00000559941 C2CD5Q86YS7 1000 aa26.96■■□□□ 1.91
CHRNA3-207ENST00000559941 ZNF526Q8TF50 670 aaPredicted RBP26.96■■□□□ 1.91
CHRNA3-207ENST00000559941 BRIP1Q9BX63 1249 aa26.96■■□□□ 1.91
CHRNA3-207ENST00000559941 H0YIN7 160 aa26.95■■□□□ 1.9
CHRNA3-207ENST00000559941 TMPOP42166 694 aaKnown RBP26.95■■□□□ 1.9
CHRNA3-207ENST00000559941 PRKRIP1Q9H875 184 aaPredicted RBP26.95■■□□□ 1.9
CHRNA3-207ENST00000559941 PDZRN3Q9UPQ7 1066 aa26.95■■□□□ 1.9
CHRNA3-207ENST00000559941 RGL2O15211 777 aa26.94■■□□□ 1.9
CHRNA3-207ENST00000559941 TTLL6Q8N841 843 aa26.94■■□□□ 1.9
CHRNA3-207ENST00000559941 ZNF652Q9Y2D9 606 aa26.94■■□□□ 1.9
CHRNA3-207ENST00000559941 PDE6BP35913 854 aa26.93■■□□□ 1.9
CHRNA3-207ENST00000559941 LMOD3Q0VAK6 560 aa26.92■■□□□ 1.9
CHRNA3-207ENST00000559941 C9orf131Q5VYM1 1079 aa26.92■■□□□ 1.9
CHRNA3-207ENST00000559941 CNBD1Q8NA66 436 aa26.92■■□□□ 1.9
CHRNA3-207ENST00000559941 COL11A2P13942 1736 aaPredicted RBP26.91■■□□□ 1.9
CHRNA3-207ENST00000559941 WDR43Q15061 677 aaKnown RBP eCLIP26.91■■□□□ 1.9
CHRNA3-207ENST00000559941 CCDC24Q8N4L8 307 aa26.91■■□□□ 1.9
CHRNA3-207ENST00000559941 CCDC146Q8IYE0 955 aa26.9■■□□□ 1.9
CHRNA3-207ENST00000559941 BABAM1Q9NWV8 329 aa26.9■■□□□ 1.9
CHRNA3-207ENST00000559941 TSPYL4Q9UJ04 414 aa26.9■■□□□ 1.9
CHRNA3-207ENST00000559941 ST5P78524 1137 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms