RNA–Protein interactions for RNA: ENST00000559840.1

CYCSP38-201, Transcript of cytochrome c, somatic pseudogene 38, humanhuman

BASIC

Gene CYCSP38, Length 322 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP38-201ENST00000559840 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
CYCSP38-201ENST00000559840 RNMTO43148 476 aaKnown RBP8.31□□□□□ -1.08
CYCSP38-201ENST00000559840 CYP19A1P11511 503 aaPredicted RBP8.31□□□□□ -1.08
CYCSP38-201ENST00000559840 CHRNA5P30532 468 aa8.31□□□□□ -1.08
CYCSP38-201ENST00000559840 MTHFSDQ2M296 383 aaKnown RBP8.31□□□□□ -1.08
CYCSP38-201ENST00000559840 USPL1Q5W0Q7 1092 aa8.31□□□□□ -1.08
CYCSP38-201ENST00000559840 ARHGAP27Q6ZUM4 889 aa8.31□□□□□ -1.08
CYCSP38-201ENST00000559840 NMRK2Q9NPI5 230 aa8.31□□□□□ -1.08
CYCSP38-201ENST00000559840 ZBTB1Q9Y2K1 713 aa8.31□□□□□ -1.08
CYCSP38-201ENST00000559840 CARMIL3Q8ND23 1372 aa8.31□□□□□ -1.08
CYCSP38-201ENST00000559840 NRXN2Q9P2S2 1712 aa8.31□□□□□ -1.08
CYCSP38-201ENST00000559840 SCN7AQ01118 1682 aa8.3□□□□□ -1.08
CYCSP38-201ENST00000559840 TM4SF1P30408 202 aa8.3□□□□□ -1.08
CYCSP38-201ENST00000559840 DALRD3Q5D0E6 543 aaKnown RBP8.3□□□□□ -1.08
CYCSP38-201ENST00000559840 CC2D1BQ5T0F9 858 aaKnown RBP8.3□□□□□ -1.08
CYCSP38-201ENST00000559840 C9orf131Q5VYM1 1079 aa8.3□□□□□ -1.08
CYCSP38-201ENST00000559840 PIM2Q9P1W9 311 aa8.3□□□□□ -1.08
CYCSP38-201ENST00000559840 DLEC1Q9Y238 1755 aa8.3□□□□□ -1.08
CYCSP38-201ENST00000559840 DIAPH1O60610 1272 aaKnown RBP8.29□□□□□ -1.08
CYCSP38-201ENST00000559840 ZPR1O75312 459 aa8.29□□□□□ -1.08
CYCSP38-201ENST00000559840 NFIXQ14938 502 aa8.29□□□□□ -1.08
CYCSP38-201ENST00000559840 BCL2L12Q9HB09 334 aa8.29□□□□□ -1.08
CYCSP38-201ENST00000559840 NARFQ9UHQ1 456 aa8.29□□□□□ -1.08
CYCSP38-201ENST00000559840 NPC1L1Q9UHC9 1359 aa8.29□□□□□ -1.08
CYCSP38-201ENST00000559840 AFDNP55196 1824 aaKnown RBP8.29□□□□□ -1.08
CYCSP38-201ENST00000559840 SIPA1L3O60292 1781 aaPredicted RBP8.28□□□□□ -1.08
CYCSP38-201ENST00000559840 TOMM70O94826 608 aa8.28□□□□□ -1.08
CYCSP38-201ENST00000559840 RASSF7Q02833 373 aa8.28□□□□□ -1.08
CYCSP38-201ENST00000559840 ERICH6Q7L0X2 663 aa8.28□□□□□ -1.08
CYCSP38-201ENST00000559840 VSIG10Q8N0Z9 540 aa8.28□□□□□ -1.08
CYCSP38-201ENST00000559840 RNF181Q9P0P0 153 aa8.28□□□□□ -1.08
CYCSP38-201ENST00000559840 GTF3C3Q9Y5Q9 886 aa8.28□□□□□ -1.08
CYCSP38-201ENST00000559840 TNRC6CQ9HCJ0 1690 aaKnown RBP8.27□□□□□ -1.08
CYCSP38-201ENST00000559840 COL11A2P13942 1736 aaPredicted RBP8.27□□□□□ -1.09
CYCSP38-201ENST00000559840 APLP1P51693 650 aa8.27□□□□□ -1.09
CYCSP38-201ENST00000559840 IFFO2Q5TF58 517 aa8.27□□□□□ -1.09
CYCSP38-201ENST00000559840 TTC5Q8N0Z6 440 aa8.27□□□□□ -1.09
CYCSP38-201ENST00000559840 TIAM2Q8IVF5 1701 aa8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 WDR90Q96KV7 1748 aa8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 CEMIPQ8WUJ3 1361 aa8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 HEG1Q9ULI3 1381 aa8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 U2SURPO15042 1029 aaKnown RBP8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 SERPINB2P05120 415 aa8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 CANXP27824 592 aaKnown RBP8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 PRELPP51888 382 aa8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 EIF5P55010 431 aaKnown RBP8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 CNGB1Q14028 1251 aaPredicted RBP8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 IL17REQ8NFR9 667 aa8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 GAS2L2Q8NHY3 880 aa8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 RBM46Q8TBY0 533 aaKnown RBP8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 ZNF496Q96IT1 587 aaPredicted RBP8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 KDM2BQ8NHM5 1336 aa8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 ANKRD31Q8N7Z5 1873 aa8.26□□□□□ -1.09
CYCSP38-201ENST00000559840 GNAT3A8MTJ3 354 aa8.25□□□□□ -1.09
CYCSP38-201ENST00000559840 NFKBIEO00221 500 aa8.25□□□□□ -1.09
CYCSP38-201ENST00000559840 STARD3NLO95772 234 aa8.25□□□□□ -1.09
CYCSP38-201ENST00000559840 TEFQ10587 303 aa8.25□□□□□ -1.09
CYCSP38-201ENST00000559840 ZNF790Q6PG37 636 aa8.25□□□□□ -1.09
CYCSP38-201ENST00000559840 SBF1O95248 1867 aa8.25□□□□□ -1.09
CYCSP38-201ENST00000559840 ZC3H4Q9UPT8 1303 aaKnown RBP8.25□□□□□ -1.09
CYCSP38-201ENST00000559840 BCORQ6W2J9 1755 aa8.25□□□□□ -1.09
CYCSP38-201ENST00000559840 HTRA3P83110 453 aa8.24□□□□□ -1.09
CYCSP38-201ENST00000559840 TBC1D9BQ66K14 1250 aa8.24□□□□□ -1.09
CYCSP38-201ENST00000559840 BICDL1Q6ZP65 573 aa8.24□□□□□ -1.09
CYCSP38-201ENST00000559840 C2CD5Q86YS7 1000 aa8.24□□□□□ -1.09
CYCSP38-201ENST00000559840 C16orf71Q8IYS4 520 aaPredicted RBP8.24□□□□□ -1.09
CYCSP38-201ENST00000559840 DNAJC5GQ8N7S2 189 aa8.24□□□□□ -1.09
CYCSP38-201ENST00000559840 RSPH6AQ9H0K4 717 aa8.24□□□□□ -1.09
CYCSP38-201ENST00000559840 ZNF330Q9Y3S2 320 aaPredicted RBP8.24□□□□□ -1.09
CYCSP38-201ENST00000559840 A0A087WZG4 1122 aa8.23□□□□□ -1.09
CYCSP38-201ENST00000559840 KCNQ3O43525 872 aa8.23□□□□□ -1.09
CYCSP38-201ENST00000559840 CAMTA2O94983 1202 aa8.23□□□□□ -1.09
CYCSP38-201ENST00000559840 LMNB1P20700 586 aa8.23□□□□□ -1.09
CYCSP38-201ENST00000559840 PRKAR2BP31323 418 aa8.23□□□□□ -1.09
CYCSP38-201ENST00000559840 IL6STP40189 918 aaPredicted RBP8.23□□□□□ -1.09
CYCSP38-201ENST00000559840 FSTL1Q12841 308 aa8.23□□□□□ -1.09
CYCSP38-201ENST00000559840 PRR5LQ6MZQ0 368 aa8.23□□□□□ -1.09
CYCSP38-201ENST00000559840 TTLL6Q8N841 843 aa8.23□□□□□ -1.09
CYCSP38-201ENST00000559840 PHACTR3Q96KR7 559 aa8.23□□□□□ -1.09
CYCSP38-201ENST00000559840 FMNL2Q96PY5 1086 aa8.23□□□□□ -1.09
CYCSP38-201ENST00000559840 H0YIN7 160 aa8.22□□□□□ -1.09
CYCSP38-201ENST00000559840 A1BGP04217 495 aa8.22□□□□□ -1.09
CYCSP38-201ENST00000559840 PPP4R3CPQ6ZMV5 832 aa8.22□□□□□ -1.09
CYCSP38-201ENST00000559840 CCDC24Q8N4L8 307 aa8.22□□□□□ -1.09
CYCSP38-201ENST00000559840 RRAGCQ9HB90 399 aa8.22□□□□□ -1.09
CYCSP38-201ENST00000559840 TBC1D2BQ9UPU7 963 aa8.22□□□□□ -1.09
CYCSP38-201ENST00000559840 PRAMEF22A3QJZ6 481 aa8.21□□□□□ -1.1
CYCSP38-201ENST00000559840 GLTPD2A6NH11 291 aa8.21□□□□□ -1.1
CYCSP38-201ENST00000559840 BTBD11A6QL63 1104 aa8.21□□□□□ -1.1
CYCSP38-201ENST00000559840 PIP4K2AP48426 406 aaPredicted RBP8.21□□□□□ -1.1
CYCSP38-201ENST00000559840 CNBD1Q8NA66 436 aa8.21□□□□□ -1.1
CYCSP38-201ENST00000559840 SMC1BQ8NDV3 1235 aa8.21□□□□□ -1.1
CYCSP38-201ENST00000559840 BRIP1Q9BX63 1249 aa8.21□□□□□ -1.1
CYCSP38-201ENST00000559840 TEX13AQ9BXU3 409 aaPredicted RBP8.21□□□□□ -1.1
CYCSP38-201ENST00000559840 ARFGEF2Q9Y6D5 1785 aa8.2□□□□□ -1.1
CYCSP38-201ENST00000559840 FER1L6Q2WGJ9 1857 aa8.2□□□□□ -1.1
CYCSP38-201ENST00000559840 C21orf2O43822 256 aa8.2□□□□□ -1.1
CYCSP38-201ENST00000559840 NPM3O75607 178 aaKnown RBP8.2□□□□□ -1.1
CYCSP38-201ENST00000559840 PPP2R1AP30153 589 aa8.2□□□□□ -1.1
CYCSP38-201ENST00000559840 PDE6BP35913 854 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms