RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CHD1LQ86WJ1 897 aa12.85□□□□□ -0.35
CARMIL3-202ENST00000559694 NIP7Q9Y221 180 aaKnown RBP eCLIP12.85□□□□□ -0.35
CARMIL3-202ENST00000559694 CDC45O75419 566 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 SLC52A2Q9HAB3 445 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 ANKIB1Q9P2G1 1089 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 TRIM35Q9UPQ4 493 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 VWDEQ8N2E2 1590 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 KSR2Q6VAB6 950 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 ADGRL3Q9HAR2 1447 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 GNPATO15228 680 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 FAM182BQ5T319 152 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 LDHAL6AQ6ZMR3 332 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 SKAP1Q86WV1 359 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 KIF1BPQ96EK5 621 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 FAM13BQ9NYF5 915 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 ANKRD18BA2A2Z9 1011 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 ZNF496Q96IT1 587 aaPredicted RBP12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 CARD10Q9BWT7 1032 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 ABCF2Q9UG63 623 aa12.84□□□□□ -0.35
CARMIL3-202ENST00000559694 A1BGP04217 495 aa12.83□□□□□ -0.36
CARMIL3-202ENST00000559694 PPRC1Q5VV67 1664 aaKnown RBP12.83□□□□□ -0.36
CARMIL3-202ENST00000559694 SMARCA5O60264 1052 aaPredicted RBP12.83□□□□□ -0.36
CARMIL3-202ENST00000559694 MRE11P49959 708 aa12.83□□□□□ -0.36
CARMIL3-202ENST00000559694 SKOR2Q2VWA4 1001 aaPredicted RBP12.83□□□□□ -0.36
CARMIL3-202ENST00000559694 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
CARMIL3-202ENST00000559694 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.36
CARMIL3-202ENST00000559694 IL17REQ8NFR9 667 aa12.83□□□□□ -0.36
CARMIL3-202ENST00000559694 MEIS3Q99687 375 aa12.83□□□□□ -0.36
CARMIL3-202ENST00000559694 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.36
CARMIL3-202ENST00000559694 ATP7BP35670 1465 aa12.83□□□□□ -0.36
CARMIL3-202ENST00000559694 CHL1O00533 1208 aa12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 RALYLQ86SE5 291 aaKnown RBP12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 ZNF622Q969S3 477 aaKnown RBP eCLIP12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 KIAA1210Q9ULL0 1709 aa12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 IFIT1P09914 478 aaKnown RBP12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 PHKG2P15735 406 aa12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 DDX21Q9NR30 783 aaKnown RBP eCLIP12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 SAMD1Q6SPF0 538 aaPredicted RBP12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 DDX46Q7L014 1031 aaKnown RBP12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 CAMSAP1Q5T5Y3 1602 aa12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 ERBB3P21860 1342 aa12.82□□□□□ -0.36
CARMIL3-202ENST00000559694 APBA3O96018 575 aa12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 AKAP17AQ02040 695 aaKnown RBP12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 FOXD4L5Q5VV16 416 aaPredicted RBP12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 FOXD4L4Q8WXT5 416 aaPredicted RBP12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 CCDC8Q9H0W5 538 aaPredicted RBP12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 BLMP54132 1417 aaPredicted RBP12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 C6orf229H3BNL8 230 aa12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 ARHGAP45Q92619 1136 aa12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 LRP2BPQ9P2M1 347 aa12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 WDR17Q8IZU2 1322 aa12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 DHX16O60231 1041 aaKnown RBP12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 TRAK2O60296 914 aa12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 IDH1O75874 414 aaKnown RBP12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 CWF19L2Q2TBE0 894 aaKnown RBP12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 AKAP2Q9Y2D5 859 aa12.81□□□□□ -0.36
CARMIL3-202ENST00000559694 LINS1Q8NG48 757 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 RAI14Q9P0K7 980 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 KIF3AQ9Y496 699 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 AATKQ6ZMQ8 1374 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 ANKARQ7Z5J8 1434 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 NFXL1Q6ZNB6 911 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 NLRP3Q96P20 1036 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 CDC5LQ99459 802 aaKnown RBP12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 GRM8O00222 908 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 TRAPPC3LQ5T215 181 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 LMBR1LQ6UX01 489 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 FAM184AQ8NB25 1140 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 TNNQ9UQP3 1299 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 MTMR7Q9Y216 660 aa12.8□□□□□ -0.36
CARMIL3-202ENST00000559694 CPLX1O14810 134 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 KCNQ3O43525 872 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 CAVIN4Q5BKX8 364 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 G2E3Q7L622 706 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 UBE2Q2Q8WVN8 375 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 SETBP1Q9Y6X0 1596 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 ERICH2A1L162 156 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 ERVV-2B6SEH9 535 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 TPTE2Q6XPS3 522 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 C22orf23Q9BZE7 217 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 AXIN2Q9Y2T1 843 aa12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 SETD1BQ9UPS6 1966 aaKnown RBP12.79□□□□□ -0.36
CARMIL3-202ENST00000559694 HIP1O00291 1037 aa12.78□□□□□ -0.36
CARMIL3-202ENST00000559694 RAB11FIP3O75154 756 aa12.78□□□□□ -0.36
CARMIL3-202ENST00000559694 STK11IPQ8N1F8 1099 aa12.78□□□□□ -0.36
CARMIL3-202ENST00000559694 ADAMTS13Q76LX8 1427 aa12.78□□□□□ -0.36
CARMIL3-202ENST00000559694 ALDH1L1O75891 902 aa12.78□□□□□ -0.36
CARMIL3-202ENST00000559694 RXRBP28702 533 aa12.78□□□□□ -0.36
CARMIL3-202ENST00000559694 ST5P78524 1137 aa12.78□□□□□ -0.36
CARMIL3-202ENST00000559694 RRP12Q5JTH9 1297 aaKnown RBP12.78□□□□□ -0.36
CARMIL3-202ENST00000559694 UNC5CLQ8IV45 518 aa12.78□□□□□ -0.36
CARMIL3-202ENST00000559694 IQGAP1P46940 1657 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms