RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 SAMD9Q5K651 1589 aa9.65□□□□□ -0.86
LRRC28-209ENST00000558861 KIAA0556O60303 1618 aa9.64□□□□□ -0.87
LRRC28-209ENST00000558861 ZBTB7CA1YPR0 619 aa9.64□□□□□ -0.87
LRRC28-209ENST00000558861 FAM187AA6NFU0 413 aa9.64□□□□□ -0.87
LRRC28-209ENST00000558861 SSFA2P28290 1259 aa9.64□□□□□ -0.87
LRRC28-209ENST00000558861 OCLNQ16625 522 aa9.64□□□□□ -0.87
LRRC28-209ENST00000558861 ESCO1Q5FWF5 840 aa9.64□□□□□ -0.87
LRRC28-209ENST00000558861 MEIOBQ8N635 442 aa9.64□□□□□ -0.87
LRRC28-209ENST00000558861 GAS2L2Q8NHY3 880 aa9.64□□□□□ -0.87
LRRC28-209ENST00000558861 A0A1W2PRU2 124 aa9.63□□□□□ -0.87
LRRC28-209ENST00000558861 BACH1O14867 736 aa9.63□□□□□ -0.87
LRRC28-209ENST00000558861 SCNN1AP37088 669 aa9.63□□□□□ -0.87
LRRC28-209ENST00000558861 PTGIRP43119 386 aa9.63□□□□□ -0.87
LRRC28-209ENST00000558861 EPHA4P54764 986 aa9.63□□□□□ -0.87
LRRC28-209ENST00000558861 B4GALNT3Q6L9W6 998 aa9.63□□□□□ -0.87
LRRC28-209ENST00000558861 CNKSR1Q969H4 720 aa9.63□□□□□ -0.87
LRRC28-209ENST00000558861 ZNF395Q9H8N7 513 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-209ENST00000558861 KCNA1Q09470 495 aa9.62□□□□□ -0.87
LRRC28-209ENST00000558861 CLN3Q13286 438 aa9.62□□□□□ -0.87
LRRC28-209ENST00000558861 CARMIL2Q6F5E8 1435 aa9.62□□□□□ -0.87
LRRC28-209ENST00000558861 ARHGAP35Q9NRY4 1499 aa9.61□□□□□ -0.87
LRRC28-209ENST00000558861 LOC105371045A0A1W2PR82 267 aa9.61□□□□□ -0.87
LRRC28-209ENST00000558861 MEN1O00255 615 aa9.61□□□□□ -0.87
LRRC28-209ENST00000558861 CAPN5O15484 640 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-209ENST00000558861 TLR1Q15399 786 aa9.61□□□□□ -0.87
LRRC28-209ENST00000558861 CYB5RLQ6IPT4 315 aa9.61□□□□□ -0.87
LRRC28-209ENST00000558861 XAGE2Q96GT9 111 aa9.61□□□□□ -0.87
LRRC28-209ENST00000558861 SLC4A9Q96Q91 983 aa9.61□□□□□ -0.87
LRRC28-209ENST00000558861 PURBQ96QR8 312 aaKnown RBP9.61□□□□□ -0.87
LRRC28-209ENST00000558861 ESYT1Q9BSJ8 1104 aa9.61□□□□□ -0.87
LRRC28-209ENST00000558861 TSPAN10Q9H1Z9 355 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-209ENST00000558861 CXXC1Q9P0U4 656 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-209ENST00000558861 PTPRGP23470 1445 aa9.6□□□□□ -0.87
LRRC28-209ENST00000558861 WEE1P30291 646 aa9.6□□□□□ -0.87
LRRC28-209ENST00000558861 TBCELQ5QJ74 424 aa9.6□□□□□ -0.87
LRRC28-209ENST00000558861 HRH3Q9Y5N1 445 aa9.6□□□□□ -0.87
LRRC28-209ENST00000558861 USP3Q9Y6I4 520 aa9.6□□□□□ -0.87
LRRC28-209ENST00000558861 A6NJY4 79 aa9.59□□□□□ -0.87
LRRC28-209ENST00000558861 SMTNP53814 917 aa9.59□□□□□ -0.87
LRRC28-209ENST00000558861 SCG3Q8WXD2 468 aaKnown RBP9.59□□□□□ -0.87
LRRC28-209ENST00000558861 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
LRRC28-209ENST00000558861 SCHIP1Q9P0W5 487 aaPredicted RBP9.59□□□□□ -0.87
LRRC28-209ENST00000558861 IVNS1ABPQ9Y6Y0 642 aa9.59□□□□□ -0.87
LRRC28-209ENST00000558861 EFCAB5A4FU69 1503 aa9.59□□□□□ -0.87
LRRC28-209ENST00000558861 C21orf2O43822 256 aa9.58□□□□□ -0.88
LRRC28-209ENST00000558861 FOXK2Q01167 660 aa9.58□□□□□ -0.88
LRRC28-209ENST00000558861 FKBP5Q13451 457 aaPredicted RBP9.58□□□□□ -0.88
LRRC28-209ENST00000558861 MTFR1Q15390 333 aa9.58□□□□□ -0.88
LRRC28-209ENST00000558861 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
LRRC28-209ENST00000558861 FHDC1Q9C0D6 1143 aaPredicted RBP9.58□□□□□ -0.88
LRRC28-209ENST00000558861 FHOD3Q2V2M9 1422 aa9.57□□□□□ -0.88
LRRC28-209ENST00000558861 AVPP01185 164 aa9.57□□□□□ -0.88
LRRC28-209ENST00000558861 CENPCQ03188 943 aa9.57□□□□□ -0.88
LRRC28-209ENST00000558861 SLC9A9Q8IVB4 645 aa9.57□□□□□ -0.88
LRRC28-209ENST00000558861 NLRP3Q96P20 1036 aa9.57□□□□□ -0.88
LRRC28-209ENST00000558861 INSM2Q96T92 566 aaPredicted RBP9.57□□□□□ -0.88
LRRC28-209ENST00000558861 TSEN34Q9BSV6 310 aaKnown RBP9.57□□□□□ -0.88
LRRC28-209ENST00000558861 MKNK1Q9BUB5 465 aa9.57□□□□□ -0.88
LRRC28-209ENST00000558861 UHRF1BP1LA0JNW5 1464 aa9.57□□□□□ -0.88
LRRC28-209ENST00000558861 ABCA8O94911 1581 aa9.56□□□□□ -0.88
LRRC28-209ENST00000558861 PLB1Q6P1J6 1458 aa9.56□□□□□ -0.88
LRRC28-209ENST00000558861 PATL2C9JE40 543 aaKnown RBP9.56□□□□□ -0.88
LRRC28-209ENST00000558861 GFRA3O60609 400 aa9.56□□□□□ -0.88
LRRC28-209ENST00000558861 BMP1P13497 986 aa9.56□□□□□ -0.88
LRRC28-209ENST00000558861 IGFBP4P22692 258 aa9.56□□□□□ -0.88
LRRC28-209ENST00000558861 C1orf216Q8TAB5 229 aa9.56□□□□□ -0.88
LRRC28-209ENST00000558861 IQSEC3Q9UPP2 1182 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-209ENST00000558861 ADCY10Q96PN6 1610 aa9.56□□□□□ -0.88
LRRC28-209ENST00000558861 CEP162Q5TB80 1403 aa9.56□□□□□ -0.88
LRRC28-209ENST00000558861 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
LRRC28-209ENST00000558861 ATAD2Q6PL18 1390 aa9.55□□□□□ -0.88
LRRC28-209ENST00000558861 C6orf118Q5T5N4 469 aa9.55□□□□□ -0.88
LRRC28-209ENST00000558861 CAPN12Q6ZSI9 719 aa9.55□□□□□ -0.88
LRRC28-209ENST00000558861 TAS1R3Q7RTX0 852 aa9.55□□□□□ -0.88
LRRC28-209ENST00000558861 TXNDC2Q86VQ3 553 aa9.55□□□□□ -0.88
LRRC28-209ENST00000558861 GZF1Q9H116 711 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-209ENST00000558861 GNEQ9Y223 722 aaKnown RBP9.55□□□□□ -0.88
LRRC28-209ENST00000558861 CLIP1P30622 1438 aa9.55□□□□□ -0.88
LRRC28-209ENST00000558861 NRG2O14511 850 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-209ENST00000558861 SPINT1O43278 529 aa9.54□□□□□ -0.88
LRRC28-209ENST00000558861 PPP1R12BO60237 982 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-209ENST00000558861 SERPINB4P48594 390 aa9.54□□□□□ -0.88
LRRC28-209ENST00000558861 PKDCCQ504Y2 493 aa9.54□□□□□ -0.88
LRRC28-209ENST00000558861 ABCC2Q92887 1545 aa9.54□□□□□ -0.88
LRRC28-209ENST00000558861 UPP2O95045 317 aa9.53□□□□□ -0.88
LRRC28-209ENST00000558861 BMP2P12643 396 aa9.53□□□□□ -0.88
LRRC28-209ENST00000558861 ARID4AP29374 1257 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-209ENST00000558861 CTSOP43234 321 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-209ENST00000558861 FOXD4L5Q5VV16 416 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-209ENST00000558861 MRPL14Q6P1L8 145 aaKnown RBP9.53□□□□□ -0.88
LRRC28-209ENST00000558861 POLMQ9NP87 494 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-209ENST00000558861 SEPT3Q9UH03 358 aa9.53□□□□□ -0.88
LRRC28-209ENST00000558861 KDM5BQ9UGL1 1544 aa9.52□□□□□ -0.88
LRRC28-209ENST00000558861 CDK2AP1O14519 115 aa9.52□□□□□ -0.89
LRRC28-209ENST00000558861 FOXO3O43524 673 aa9.52□□□□□ -0.89
LRRC28-209ENST00000558861 DGAT1O75907 488 aa9.52□□□□□ -0.89
LRRC28-209ENST00000558861 RANGAP1P46060 587 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-209ENST00000558861 ZNF295-AS1Q8N0V1 137 aa9.52□□□□□ -0.89
LRRC28-209ENST00000558861 CCER1Q8TC90 406 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-209ENST00000558861 ZSCAN10Q96SZ4 725 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms