RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 KIF3AQ9Y496 699 aa6.63□□□□□ -1.35
GABPB1-207ENST00000558335 DDX49Q9Y6V7 483 aaKnown RBP6.63□□□□□ -1.35
GABPB1-207ENST00000558335 USP6P35125 1406 aa6.62□□□□□ -1.35
GABPB1-207ENST00000558335 ADGRL3Q9HAR2 1447 aa6.62□□□□□ -1.35
GABPB1-207ENST00000558335 HMOX1P09601 288 aa6.62□□□□□ -1.35
GABPB1-207ENST00000558335 HOXB7P09629 217 aa6.62□□□□□ -1.35
GABPB1-207ENST00000558335 MSNP26038 577 aaKnown RBP6.62□□□□□ -1.35
GABPB1-207ENST00000558335 FAM69CQ0P6D2 419 aa6.62□□□□□ -1.35
GABPB1-207ENST00000558335 EGFL6Q8IUX8 553 aa6.62□□□□□ -1.35
GABPB1-207ENST00000558335 FAM184AQ8NB25 1140 aa6.62□□□□□ -1.35
GABPB1-207ENST00000558335 PPP1R9BQ96SB3 815 aa6.62□□□□□ -1.35
GABPB1-207ENST00000558335 USP26Q9BXU7 913 aa6.62□□□□□ -1.35
GABPB1-207ENST00000558335 KDRP35968 1356 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 NRDCO43847 1150 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 KIF1CO43896 1103 aaKnown RBP6.61□□□□□ -1.35
GABPB1-207ENST00000558335 IGSF3O75054 1194 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 BAG4O95429 457 aaKnown RBP6.61□□□□□ -1.35
GABPB1-207ENST00000558335 NASPP49321 788 aaPredicted RBP6.61□□□□□ -1.35
GABPB1-207ENST00000558335 FXR2P51116 673 aaKnown RBP eCLIP6.61□□□□□ -1.35
GABPB1-207ENST00000558335 SATB1Q01826 763 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 SULT6B1Q6IMI4 303 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 CEP85Q6P2H3 762 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 NME9Q86XW9 330 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 RUFY2Q8WXA3 655 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 IL17RAQ96F46 866 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 PHACTR3Q96KR7 559 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 LRRCC1Q9C099 1032 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 CALCOCO1Q9P1Z2 691 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 EMILIN1Q9Y6C2 1016 aa6.61□□□□□ -1.35
GABPB1-207ENST00000558335 ATP10DQ9P241 1426 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 GABPB1Q06547 395 aaPredicted RBP6.6□□□□□ -1.35
GABPB1-207ENST00000558335 OS9Q13438 667 aaPredicted RBP6.6□□□□□ -1.35
GABPB1-207ENST00000558335 EIF4A2Q14240 407 aaKnown RBP6.6□□□□□ -1.35
GABPB1-207ENST00000558335 ZKSCAN8Q15776 578 aaPredicted RBP6.6□□□□□ -1.35
GABPB1-207ENST00000558335 FBXO31Q5XUX0 539 aaPredicted RBP6.6□□□□□ -1.35
GABPB1-207ENST00000558335 WAPLQ7Z5K2 1190 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 ZSCAN30Q86W11 494 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 C8orf58Q8NAV2 365 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 SP7Q8TDD2 431 aaPredicted RBP6.6□□□□□ -1.35
GABPB1-207ENST00000558335 CHMP4CQ96CF2 233 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 GPATCH3Q96I76 525 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 TIGD1Q96MW7 591 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 MYCBPQ99417 103 aaPredicted RBP6.6□□□□□ -1.35
GABPB1-207ENST00000558335 BRMS1Q9HCU9 246 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 TSPYL4Q9UJ04 414 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 TBX22Q9Y458 520 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 LRRC37A3O60309 1634 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 SLIT1O75093 1534 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 TSPOAP1O95153 1857 aa6.6□□□□□ -1.35
GABPB1-207ENST00000558335 WDR33Q9C0J8 1336 aaKnown RBP6.59□□□□□ -1.35
GABPB1-207ENST00000558335 GNAT3A8MTJ3 354 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 HIP1O00291 1037 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 TPM3P06753 285 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 SETDB1Q15047 1291 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 UVSSAQ2YD98 709 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 ERC1Q8IUD2 1116 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 SIRT2Q8IXJ6 389 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 PDCL2Q8N4E4 241 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 SPRYD3Q8NCJ5 442 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 BANK1Q8NDB2 785 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 KIF2CQ99661 725 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 FEZ1Q99689 392 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 GZF1Q9H116 711 aaPredicted RBP6.59□□□□□ -1.35
GABPB1-207ENST00000558335 CCDC39Q9UFE4 941 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 STAP2Q9UGK3 403 aa6.59□□□□□ -1.35
GABPB1-207ENST00000558335 CRB1P82279 1406 aa6.59□□□□□ -1.36
GABPB1-207ENST00000558335 FAM208AQ9UK61 1670 aaKnown RBP6.58□□□□□ -1.36
GABPB1-207ENST00000558335 METP08581 1390 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 AK9Q5TCS8 1911 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 PLEKHG2Q9H7P9 1386 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 ACEP12821 1306 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 CYP2E1P05181 493 aaPredicted RBP6.58□□□□□ -1.36
GABPB1-207ENST00000558335 NEFHP12036 1026 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 SDSP20132 328 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 MX1P20591 662 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 AMPHP49418 695 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 PDE1AP54750 535 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 HMGN5P82970 282 aaKnown RBP6.58□□□□□ -1.36
GABPB1-207ENST00000558335 ATP8B2P98198 1209 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 MAP2K1Q02750 393 aaPredicted RBP6.58□□□□□ -1.36
GABPB1-207ENST00000558335 MKRN4PQ13434 485 aaPredicted RBP6.58□□□□□ -1.36
GABPB1-207ENST00000558335 FAM43BQ6ZT52 329 aaPredicted RBP6.58□□□□□ -1.36
GABPB1-207ENST00000558335 RPAINQ86UA6 219 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 TXNDC2Q86VQ3 553 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 THEMISQ8N1K5 641 aaPredicted RBP6.58□□□□□ -1.36
GABPB1-207ENST00000558335 TSPYL6Q8N831 410 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 FAM13BQ9NYF5 915 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.58□□□□□ -1.36
GABPB1-207ENST00000558335 OVOS2A0A0G2JMS6 1433 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 NCAPD2Q15021 1401 aa6.58□□□□□ -1.36
GABPB1-207ENST00000558335 IGSF1Q8N6C5 1336 aa6.57□□□□□ -1.36
GABPB1-207ENST00000558335 VGLL3A8MV65 326 aa6.57□□□□□ -1.36
GABPB1-207ENST00000558335 ELL2O00472 640 aaPredicted RBP6.57□□□□□ -1.36
GABPB1-207ENST00000558335 UBTFL1P0CB47 393 aaPredicted RBP6.57□□□□□ -1.36
GABPB1-207ENST00000558335 GSPT1P15170 499 aaKnown RBP6.57□□□□□ -1.36
GABPB1-207ENST00000558335 CUL4AQ13619 759 aa6.57□□□□□ -1.36
GABPB1-207ENST00000558335 TAF7Q15545 349 aaPredicted RBP6.57□□□□□ -1.36
GABPB1-207ENST00000558335 NBPF6Q5VWK0 638 aa6.57□□□□□ -1.36
GABPB1-207ENST00000558335 NBPF10Q6P3W6 841 aaKnown RBP6.57□□□□□ -1.36
GABPB1-207ENST00000558335 NBPF5PQ86XG9 351 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms