RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
SPG11-210ENST00000558319 CCDC175P0C221 793 aa16.2■□□□□ 0.18
SPG11-210ENST00000558319 PPP6R1Q9UPN7 881 aa16.19■□□□□ 0.18
SPG11-210ENST00000558319 KIF2AO00139 706 aaPredicted RBP16.19■□□□□ 0.18
SPG11-210ENST00000558319 HLTFQ14527 1009 aaKnown RBP eCLIP16.19■□□□□ 0.18
SPG11-210ENST00000558319 MVPQ14764 893 aaKnown RBP16.19■□□□□ 0.18
SPG11-210ENST00000558319 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
SPG11-210ENST00000558319 ADCY5O95622 1261 aa16.19■□□□□ 0.18
SPG11-210ENST00000558319 RTEL1-TNFRSF6BF6WH68 1400 aa16.19■□□□□ 0.18
SPG11-210ENST00000558319 ANAPC15P60006 121 aa16.19■□□□□ 0.18
SPG11-210ENST00000558319 SNRKQ9NRH2 765 aa16.19■□□□□ 0.18
SPG11-210ENST00000558319 NUP88Q99567 741 aaPredicted RBP16.19■□□□□ 0.18
SPG11-210ENST00000558319 IMMTQ16891 758 aaKnown RBP16.18■□□□□ 0.18
SPG11-210ENST00000558319 ZBTB3Q9H5J0 574 aa16.18■□□□□ 0.18
SPG11-210ENST00000558319 BMP2KQ9NSY1 1161 aaPredicted RBP16.18■□□□□ 0.18
SPG11-210ENST00000558319 TMC6Q7Z403 805 aa16.18■□□□□ 0.18
SPG11-210ENST00000558319 MAATS1Q7Z4T9 603 aa16.18■□□□□ 0.18
SPG11-210ENST00000558319 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.182e-6■■□□□ 11.9
SPG11-210ENST00000558319 BIN1O00499 593 aa16.18■□□□□ 0.18
SPG11-210ENST00000558319 HAND2P61296 217 aa16.18■□□□□ 0.18
SPG11-210ENST00000558319 TMOD2Q9NZR1 351 aa16.18■□□□□ 0.18
SPG11-210ENST00000558319 IGSF3O75054 1194 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 SMC1AQ14683 1233 aaKnown RBP16.17■□□□□ 0.18
SPG11-210ENST00000558319 TNPO1Q92973 898 aaKnown RBP16.17■□□□□ 0.18
SPG11-210ENST00000558319 ATP5J2-PTCD1G3V325 749 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 ACSBG1Q96GR2 724 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 ZSCAN31Q96LW9 406 aaPredicted RBP16.17■□□□□ 0.18
SPG11-210ENST00000558319 PUF60Q9UHX1 559 aaKnown RBP16.17■□□□□ 0.18
SPG11-210ENST00000558319 ANKRD50Q9ULJ7 1429 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 TMCO5BA8MYB1 307 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 FBLN1P23142 703 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 C6orf229H3BNL8 230 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 CACNA2D4Q7Z3S7 1137 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 CEP135Q66GS9 1140 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 ZSCAN25Q6NSZ9 544 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
SPG11-210ENST00000558319 RSPH14Q9UHP6 348 aa16.17■□□□□ 0.18
SPG11-210ENST00000558319 IQSEC3Q9UPP2 1182 aaPredicted RBP16.17■□□□□ 0.18
SPG11-210ENST00000558319 GCOM1H8Y6P7 765 aaPredicted RBP16.16■□□□□ 0.18
SPG11-210ENST00000558319 MYZAPP0CAP1 466 aa16.16■□□□□ 0.18
SPG11-210ENST00000558319 HSP90AA4PQ58FG1 418 aa16.16■□□□□ 0.18
SPG11-210ENST00000558319 GNAT3A8MTJ3 354 aa16.16■□□□□ 0.18
SPG11-210ENST00000558319 STAMBPO95630 424 aa16.16■□□□□ 0.18
SPG11-210ENST00000558319 MCM3P25205 808 aa16.16■□□□□ 0.18
SPG11-210ENST00000558319 ATF7IPQ6VMQ6 1270 aa16.16■□□□□ 0.18
SPG11-210ENST00000558319 DUSP27Q5VZP5 1158 aa16.15■□□□□ 0.18
SPG11-210ENST00000558319 RPGRQ92834 1020 aaKnown RBP16.15■□□□□ 0.18
SPG11-210ENST00000558319 TRMT112Q9UI30 125 aaKnown RBP16.15■□□□□ 0.18
SPG11-210ENST00000558319 GAPVD1Q14C86 1478 aa16.15■□□□□ 0.18
SPG11-210ENST00000558319 SNW1Q13573 536 aaKnown RBP16.15■□□□□ 0.18
SPG11-210ENST00000558319 SCAPERQ9BY12 1400 aa16.15■□□□□ 0.18
SPG11-210ENST00000558319 IFIT1P09914 478 aaKnown RBP16.15■□□□□ 0.18
SPG11-210ENST00000558319 CAVIN4Q5BKX8 364 aa16.15■□□□□ 0.18
SPG11-210ENST00000558319 MYOM3Q5VTT5 1437 aa16.15■□□□□ 0.18
SPG11-210ENST00000558319 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.18
SPG11-210ENST00000558319 CDKL5O76039 1030 aa16.14■□□□□ 0.17
SPG11-210ENST00000558319 SAMM50Q9Y512 469 aa16.14■□□□□ 0.17
SPG11-210ENST00000558319 CEBPAP49715 358 aaPredicted RBP16.14■□□□□ 0.17
SPG11-210ENST00000558319 STARD3NLO95772 234 aa16.14■□□□□ 0.17
SPG11-210ENST00000558319 DYNC1I1O14576 645 aa16.14■□□□□ 0.17
SPG11-210ENST00000558319 ANXA1P04083 346 aa16.14■□□□□ 0.17
SPG11-210ENST00000558319 PAFAH1B1P43034 410 aa16.14■□□□□ 0.17
SPG11-210ENST00000558319 COMMD10Q9Y6G5 202 aa16.14■□□□□ 0.17
SPG11-210ENST00000558319 NBPF8Q3BBV2 869 aa16.13■□□□□ 0.17
SPG11-210ENST00000558319 TDRD12Q587J7 1177 aaKnown RBP16.13■□□□□ 0.17
SPG11-210ENST00000558319 CCDC160A6NGH7 325 aa16.13■□□□□ 0.17
SPG11-210ENST00000558319 BMS1Q14692 1282 aaKnown RBP16.13■□□□□ 0.17
SPG11-210ENST00000558319 ANKLE2Q86XL3 938 aa16.13■□□□□ 0.17
SPG11-210ENST00000558319 NGLY1Q96IV0 654 aa16.13■□□□□ 0.17
SPG11-210ENST00000558319 NAPBQ9H115 298 aa16.13■□□□□ 0.17
SPG11-210ENST00000558319 FOXO3O43524 673 aa16.13■□□□□ 0.17
SPG11-210ENST00000558319 ZNF444Q8N0Y2 327 aaPredicted RBP16.13■□□□□ 0.17
SPG11-210ENST00000558319 THEMISQ8N1K5 641 aaPredicted RBP16.13■□□□□ 0.17
SPG11-210ENST00000558319 PRPF4BQ13523 1007 aaKnown RBP16.13■□□□□ 0.17
SPG11-210ENST00000558319 IRX3P78415 501 aaPredicted RBP16.12■□□□□ 0.17
SPG11-210ENST00000558319 TAF7Q15545 349 aaPredicted RBP16.12■□□□□ 0.17
SPG11-210ENST00000558319 FKBP15Q5T1M5 1219 aa16.12■□□□□ 0.17
SPG11-210ENST00000558319 VTI1AQ96AJ9 217 aa16.12■□□□□ 0.17
SPG11-210ENST00000558319 C20orf194Q5TEA3 1177 aa16.12■□□□□ 0.17
SPG11-210ENST00000558319 NME9Q86XW9 330 aa16.12■□□□□ 0.17
SPG11-210ENST00000558319 MICALL1Q8N3F8 863 aa16.12■□□□□ 0.17
SPG11-210ENST00000558319 RGS22Q8NE09 1264 aa16.12■□□□□ 0.17
SPG11-210ENST00000558319 FGD5Q6ZNL6 1462 aa16.12■□□□□ 0.17
SPG11-210ENST00000558319 CHRNA2Q15822 529 aa16.12■□□□□ 0.17
SPG11-210ENST00000558319 LARP1Q6PKG0 1096 aaKnown RBP16.12■□□□□ 0.17
SPG11-210ENST00000558319 DPH6Q7L8W6 267 aa16.12■□□□□ 0.17
SPG11-210ENST00000558319 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.12■□□□□ 0.17
SPG11-210ENST00000558319 V9GYY5 206 aaPredicted RBP16.12■□□□□ 0.17
SPG11-210ENST00000558319 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
SPG11-210ENST00000558319 ZNF354CQ86Y25 554 aa16.11■□□□□ 0.17
SPG11-210ENST00000558319 TBC1D2Q9BYX2 928 aa16.11■□□□□ 0.17
SPG11-210ENST00000558319 NLRP5P59047 1200 aa16.11■□□□□ 0.17
SPG11-210ENST00000558319 TFIP11Q9UBB9 837 aaKnown RBP16.11■□□□□ 0.17
SPG11-210ENST00000558319 JAG2Q9Y219 1238 aa16.11■□□□□ 0.17
SPG11-210ENST00000558319 ERBINQ96RT1 1412 aa16.11■□□□□ 0.17
SPG11-210ENST00000558319 NUDT16Q96DE0 195 aaKnown RBP16.11■□□□□ 0.17
SPG11-210ENST00000558319 AKNAD1Q5T1N1 836 aa16.1■□□□□ 0.17
SPG11-210ENST00000558319 TCERG1LQ5VWI1 586 aa16.1■□□□□ 0.17
SPG11-210ENST00000558319 DRC1Q96MC2 740 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms