RNA–Protein interactions for RNA: ENST00000558222.1

PBX4-203, Transcript of PBX homeobox 4, humanhuman

TSL 2

Gene PBX4, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-203ENST00000558222 CFAP53Q96M91 514 aa22.18■■□□□ 1.14
PBX4-203ENST00000558222 KCNA3P22001 575 aa22.17■■□□□ 1.14
PBX4-203ENST00000558222 CANXP27824 592 aaKnown RBP22.17■■□□□ 1.14
PBX4-203ENST00000558222 TEFQ10587 303 aa22.17■■□□□ 1.14
PBX4-203ENST00000558222 TTC5Q8N0Z6 440 aa22.17■■□□□ 1.14
PBX4-203ENST00000558222 ZNF496Q96IT1 587 aaPredicted RBP22.17■■□□□ 1.14
PBX4-203ENST00000558222 AFDNP55196 1824 aaKnown RBP22.16■■□□□ 1.14
PBX4-203ENST00000558222 ZPR1O75312 459 aa22.16■■□□□ 1.14
PBX4-203ENST00000558222 FCHSD2O94868 740 aa22.16■■□□□ 1.14
PBX4-203ENST00000558222 TM4SF1P30408 202 aa22.16■■□□□ 1.14
PBX4-203ENST00000558222 VSIG10Q8N0Z9 540 aa22.16■■□□□ 1.14
PBX4-203ENST00000558222 BCL2L12Q9HB09 334 aa22.16■■□□□ 1.14
PBX4-203ENST00000558222 GPBP1L1Q9HC44 474 aaPredicted RBP22.16■■□□□ 1.14
PBX4-203ENST00000558222 CHRNA5P30532 468 aa22.15■■□□□ 1.14
PBX4-203ENST00000558222 CEMIPQ8WUJ3 1361 aa22.14■■□□□ 1.14
PBX4-203ENST00000558222 HEG1Q9ULI3 1381 aa22.14■■□□□ 1.14
PBX4-203ENST00000558222 KCNQ3O43525 872 aa22.14■■□□□ 1.13
PBX4-203ENST00000558222 U2AF1L5P0DN76 240 aaPredicted RBP22.14■■□□□ 1.13
PBX4-203ENST00000558222 U2AF1Q01081 240 aaKnown RBP eCLIP22.14■■□□□ 1.13
PBX4-203ENST00000558222 NFIXQ14938 502 aa22.14■■□□□ 1.13
PBX4-203ENST00000558222 ZNF790Q6PG37 636 aa22.14■■□□□ 1.13
PBX4-203ENST00000558222 NARFQ9UHQ1 456 aa22.14■■□□□ 1.13
PBX4-203ENST00000558222 ARFGEF1Q9Y6D6 1849 aa22.13■■□□□ 1.13
PBX4-203ENST00000558222 NRXN2Q9P2S2 1712 aa22.13■■□□□ 1.13
PBX4-203ENST00000558222 ARHGAP27Q6ZUM4 889 aa22.12■■□□□ 1.13
PBX4-203ENST00000558222 SCN7AQ01118 1682 aa22.11■■□□□ 1.13
PBX4-203ENST00000558222 NUDCQ9Y266 331 aa22.11■■□□□ 1.13
PBX4-203ENST00000558222 EIF5P55010 431 aaKnown RBP22.1■■□□□ 1.13
PBX4-203ENST00000558222 ZNF330Q9Y3S2 320 aaPredicted RBP22.1■■□□□ 1.13
PBX4-203ENST00000558222 CARMIL3Q8ND23 1372 aa22.1■■□□□ 1.13
PBX4-203ENST00000558222 STARD3NLO95772 234 aa22.09■■□□□ 1.13
PBX4-203ENST00000558222 MCM10Q7L590 875 aa22.09■■□□□ 1.13
PBX4-203ENST00000558222 PIM2Q9P1W9 311 aa22.09■■□□□ 1.13
PBX4-203ENST00000558222 DCTN1Q14203 1278 aa22.08■■□□□ 1.13
PBX4-203ENST00000558222 BICDL1Q6ZP65 573 aa22.08■■□□□ 1.13
PBX4-203ENST00000558222 FMNL2Q96PY5 1086 aa22.08■■□□□ 1.13
PBX4-203ENST00000558222 PRAMEF22A3QJZ6 481 aa22.07■■□□□ 1.12
PBX4-203ENST00000558222 BTBD11A6QL63 1104 aa22.07■■□□□ 1.12
PBX4-203ENST00000558222 A1BGP04217 495 aa22.07■■□□□ 1.12
PBX4-203ENST00000558222 SERPINB2P05120 415 aa22.07■■□□□ 1.12
PBX4-203ENST00000558222 PIP4K2AP48426 406 aaPredicted RBP22.06■■□□□ 1.12
PBX4-203ENST00000558222 DALRD3Q5D0E6 543 aaKnown RBP22.06■■□□□ 1.12
PBX4-203ENST00000558222 DLEC1Q9Y238 1755 aa22.05■■□□□ 1.12
PBX4-203ENST00000558222 KIF3CO14782 793 aa22.05■■□□□ 1.12
PBX4-203ENST00000558222 TBC1D9BQ66K14 1250 aa22.05■■□□□ 1.12
PBX4-203ENST00000558222 TBC1D2BQ9UPU7 963 aa22.05■■□□□ 1.12
PBX4-203ENST00000558222 C9orf131Q5VYM1 1079 aa22.04■■□□□ 1.12
PBX4-203ENST00000558222 ANKRD31Q8N7Z5 1873 aa22.03■■□□□ 1.12
PBX4-203ENST00000558222 BCORQ6W2J9 1755 aa22.03■■□□□ 1.12
PBX4-203ENST00000558222 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
PBX4-203ENST00000558222 TEX13AQ9BXU3 409 aaPredicted RBP22.03■■□□□ 1.12
PBX4-203ENST00000558222 USP16Q9Y5T5 823 aa22.03■■□□□ 1.12
PBX4-203ENST00000558222 A0A087WZG4 1122 aa22.02■■□□□ 1.12
PBX4-203ENST00000558222 CCDC24Q8N4L8 307 aa22.02■■□□□ 1.12
PBX4-203ENST00000558222 DLG5Q8TDM6 1919 aa22.02■■□□□ 1.11
PBX4-203ENST00000558222 IL6STP40189 918 aaPredicted RBP22.01■■□□□ 1.11
PBX4-203ENST00000558222 RASSF7Q02833 373 aa22.01■■□□□ 1.11
PBX4-203ENST00000558222 COL11A2P13942 1736 aaPredicted RBP22■■□□□ 1.11
PBX4-203ENST00000558222 CAMTA2O94983 1202 aa22■■□□□ 1.11
PBX4-203ENST00000558222 NMRK2Q9NPI5 230 aa22■■□□□ 1.11
PBX4-203ENST00000558222 SBF1O95248 1867 aa21.99■■□□□ 1.11
PBX4-203ENST00000558222 C2CD5Q86YS7 1000 aa21.99■■□□□ 1.11
PBX4-203ENST00000558222 RNF181Q9P0P0 153 aa21.99■■□□□ 1.11
PBX4-203ENST00000558222 DZIP3Q86Y13 1208 aaKnown RBP21.97■■□□□ 1.11
PBX4-203ENST00000558222 MIS18AQ9NYP9 233 aa21.97■■□□□ 1.11
PBX4-203ENST00000558222 PRR5LQ6MZQ0 368 aa21.96■■□□□ 1.11
PBX4-203ENST00000558222 HTATSF1O43719 755 aaKnown RBP21.95■■□□□ 1.1
PBX4-203ENST00000558222 SNRPA1P09661 255 aaKnown RBP21.95■■□□□ 1.1
PBX4-203ENST00000558222 PRELPP51888 382 aa21.95■■□□□ 1.1
PBX4-203ENST00000558222 PLEKHF1Q96S99 279 aa21.95■■□□□ 1.1
PBX4-203ENST00000558222 THUMPD2Q9BTF0 503 aaKnown RBP21.95■■□□□ 1.1
PBX4-203ENST00000558222 LAMB4A4D0S4 1761 aa21.94■■□□□ 1.1
PBX4-203ENST00000558222 KDM3BQ7LBC6 1761 aa21.94■■□□□ 1.1
PBX4-203ENST00000558222 HSPA6P17066 643 aa21.94■■□□□ 1.1
PBX4-203ENST00000558222 TTLL6Q8N841 843 aa21.94■■□□□ 1.1
PBX4-203ENST00000558222 NBPF26B4DH59 902 aa21.93■■□□□ 1.1
PBX4-203ENST00000558222 H0YIN7 160 aa21.93■■□□□ 1.1
PBX4-203ENST00000558222 NBPF10Q6P3W6 841 aaKnown RBP21.93■■□□□ 1.1
PBX4-203ENST00000558222 NPM2Q86SE8 214 aaKnown RBP21.93■■□□□ 1.1
PBX4-203ENST00000558222 NBPF15Q8N660 670 aa21.93■■□□□ 1.1
PBX4-203ENST00000558222 TAF7Q15545 349 aaPredicted RBP21.92■■□□□ 1.1
PBX4-203ENST00000558222 ZNF622Q969S3 477 aaKnown RBP eCLIP21.92■■□□□ 1.1
PBX4-203ENST00000558222 ZNF219Q9P2Y4 722 aaPredicted RBP21.92■■□□□ 1.1
PBX4-203ENST00000558222 CACNA1SQ13698 1873 aa21.92■■□□□ 1.1
PBX4-203ENST00000558222 CNBD1Q8NA66 436 aa21.91■■□□□ 1.1
PBX4-203ENST00000558222 SETDB2Q96T68 719 aa21.91■■□□□ 1.1
PBX4-203ENST00000558222 CCDC88AQ3V6T2 1871 aa21.9■■□□□ 1.1
PBX4-203ENST00000558222 TIAM2Q8IVF5 1701 aa21.9■■□□□ 1.1
PBX4-203ENST00000558222 NFKBIEO00221 500 aa21.9■■□□□ 1.1
PBX4-203ENST00000558222 NFE2L2Q16236 605 aa21.9■■□□□ 1.1
PBX4-203ENST00000558222 BRIP1Q9BX63 1249 aa21.9■■□□□ 1.1
PBX4-203ENST00000558222 NEFMP07197 916 aa21.89■■□□□ 1.09
PBX4-203ENST00000558222 NPHP1O15259 732 aa21.88■■□□□ 1.09
PBX4-203ENST00000558222 TOMM70O94826 608 aa21.87■■□□□ 1.09
PBX4-203ENST00000558222 PDE6BP35913 854 aa21.87■■□□□ 1.09
PBX4-203ENST00000558222 TNRC6CQ9HCJ0 1690 aaKnown RBP21.87■■□□□ 1.09
PBX4-203ENST00000558222 CEP350Q5VT06 3117 aa21.87■■□□□ 1.09
PBX4-203ENST00000558222 SLX4Q8IY92 1834 aa21.87■■□□□ 1.09
PBX4-203ENST00000558222 MAPK8IP3Q9UPT6 1336 aa21.86■■□□□ 1.09
PBX4-203ENST00000558222 C21orf2O43822 256 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms