RNA–Protein interactions for RNA: ENST00000558204.5

LRRC49-208, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-208ENST00000558204 USP42Q9H9J4 1324 aaKnown RBP11.27□□□□□ -0.61
LRRC49-208ENST00000558204 COL5A3P25940 1745 aaPredicted RBP11.26□□□□□ -0.61
LRRC49-208ENST00000558204 SBF1O95248 1867 aa11.26□□□□□ -0.61
LRRC49-208ENST00000558204 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
LRRC49-208ENST00000558204 PLEKHO1Q53GL0 409 aaPredicted RBP11.26□□□□□ -0.61
LRRC49-208ENST00000558204 ZNF530Q6P9A1 599 aaPredicted RBP11.26□□□□□ -0.61
LRRC49-208ENST00000558204 PCNTO95613 3336 aa11.25□□□□□ -0.61
LRRC49-208ENST00000558204 ZNF831Q5JPB2 1677 aa11.25□□□□□ -0.61
LRRC49-208ENST00000558204 POLRMTO00411 1230 aaKnown RBP11.25□□□□□ -0.61
LRRC49-208ENST00000558204 MTHFSP49914 203 aa11.25□□□□□ -0.61
LRRC49-208ENST00000558204 EIF4A2Q14240 407 aaKnown RBP11.25□□□□□ -0.61
LRRC49-208ENST00000558204 C1orf141Q5JVX7 400 aa11.25□□□□□ -0.61
LRRC49-208ENST00000558204 USPL1Q5W0Q7 1092 aa11.25□□□□□ -0.61
LRRC49-208ENST00000558204 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
LRRC49-208ENST00000558204 CARD14Q9BXL6 1004 aa11.25□□□□□ -0.61
LRRC49-208ENST00000558204 MKRN1Q9UHC7 482 aaKnown RBP11.25□□□□□ -0.61
LRRC49-208ENST00000558204 POLKQ9UBT6 870 aa11.24□□□□□ -0.61
LRRC49-208ENST00000558204 MYH14Q7Z406 1995 aaKnown RBP11.23□□□□□ -0.61
LRRC49-208ENST00000558204 TM4SF1P30408 202 aa11.23□□□□□ -0.61
LRRC49-208ENST00000558204 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
LRRC49-208ENST00000558204 NFATC2IPQ8NCF5 419 aa11.23□□□□□ -0.61
LRRC49-208ENST00000558204 KDM6AO15550 1401 aaPredicted RBP11.22□□□□□ -0.61
LRRC49-208ENST00000558204 AMOTQ4VCS5 1084 aa11.22□□□□□ -0.61
LRRC49-208ENST00000558204 C2CD5Q86YS7 1000 aa11.22□□□□□ -0.61
LRRC49-208ENST00000558204 AIDAQ96BJ3 306 aa11.22□□□□□ -0.61
LRRC49-208ENST00000558204 POLR3GLQ9BT43 218 aa11.22□□□□□ -0.61
LRRC49-208ENST00000558204 ANKRD26Q9UPS8 1709 aa11.22□□□□□ -0.61
LRRC49-208ENST00000558204 TIAM2Q8IVF5 1701 aa11.21□□□□□ -0.61
LRRC49-208ENST00000558204 H0YIN7 160 aa11.21□□□□□ -0.61
LRRC49-208ENST00000558204 SERPINB2P05120 415 aa11.21□□□□□ -0.61
LRRC49-208ENST00000558204 CREBZFQ9NS37 354 aa11.21□□□□□ -0.61
LRRC49-208ENST00000558204 FOXN1O15353 648 aa11.2□□□□□ -0.62
LRRC49-208ENST00000558204 NFIXQ14938 502 aa11.2□□□□□ -0.62
LRRC49-208ENST00000558204 ERFEQ4G0M1 354 aa11.2□□□□□ -0.62
LRRC49-208ENST00000558204 CHADLQ6NUI6 762 aa11.2□□□□□ -0.62
LRRC49-208ENST00000558204 INTS5Q6P9B9 1019 aaKnown RBP11.2□□□□□ -0.62
LRRC49-208ENST00000558204 DNAJC10Q8IXB1 793 aa11.2□□□□□ -0.62
LRRC49-208ENST00000558204 ZNF622Q969S3 477 aaKnown RBP eCLIP11.2□□□□□ -0.62
LRRC49-208ENST00000558204 CCDC88AQ3V6T2 1871 aa11.19□□□□□ -0.62
LRRC49-208ENST00000558204 POTECB2RU33 542 aa11.19□□□□□ -0.62
LRRC49-208ENST00000558204 NFKBIEO00221 500 aa11.19□□□□□ -0.62
LRRC49-208ENST00000558204 BICDL1Q6ZP65 573 aa11.19□□□□□ -0.62
LRRC49-208ENST00000558204 NARFQ9UHQ1 456 aa11.19□□□□□ -0.62
LRRC49-208ENST00000558204 TJP1Q07157 1748 aa11.18□□□□□ -0.62
LRRC49-208ENST00000558204 SOS1Q07889 1333 aaPredicted RBP11.18□□□□□ -0.62
LRRC49-208ENST00000558204 CTCFP49711 727 aaPredicted RBP11.18□□□□□ -0.62
LRRC49-208ENST00000558204 PRDM10Q9NQV6 1147 aa11.18□□□□□ -0.62
LRRC49-208ENST00000558204 COL15A1P39059 1388 aa11.17□□□□□ -0.62
LRRC49-208ENST00000558204 AFDNP55196 1824 aaKnown RBP11.17□□□□□ -0.62
LRRC49-208ENST00000558204 NPHP1O15259 732 aa11.17□□□□□ -0.62
LRRC49-208ENST00000558204 C21orf2O43822 256 aa11.17□□□□□ -0.62
LRRC49-208ENST00000558204 AEBP1Q8IUX7 1158 aa11.17□□□□□ -0.62
LRRC49-208ENST00000558204 CNTNAP1P78357 1384 aa11.16□□□□□ -0.62
LRRC49-208ENST00000558204 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
LRRC49-208ENST00000558204 SLC34A2O95436 690 aa11.16□□□□□ -0.62
LRRC49-208ENST00000558204 POTEIP0CG38 1075 aa11.16□□□□□ -0.62
LRRC49-208ENST00000558204 POTEJP0CG39 1038 aa11.16□□□□□ -0.62
LRRC49-208ENST00000558204 CANXP27824 592 aaKnown RBP11.16□□□□□ -0.62
LRRC49-208ENST00000558204 ZBTB1Q9Y2K1 713 aa11.16□□□□□ -0.62
LRRC49-208ENST00000558204 DLEC1Q9Y238 1755 aa11.16□□□□□ -0.62
LRRC49-208ENST00000558204 CARMIL3Q8ND23 1372 aa11.16□□□□□ -0.62
LRRC49-208ENST00000558204 IQCA1LA6NCM1 817 aa11.15□□□□□ -0.62
LRRC49-208ENST00000558204 CYP19A1P11511 503 aaPredicted RBP11.15□□□□□ -0.62
LRRC49-208ENST00000558204 PDE6BP35913 854 aa11.15□□□□□ -0.62
LRRC49-208ENST00000558204 LBX1P52954 281 aa11.15□□□□□ -0.62
LRRC49-208ENST00000558204 SLC39A6Q13433 755 aa11.15□□□□□ -0.62
LRRC49-208ENST00000558204 SULT6B1Q6IMI4 303 aa11.15□□□□□ -0.62
LRRC49-208ENST00000558204 TAOK3Q9H2K8 898 aa11.15□□□□□ -0.62
LRRC49-208ENST00000558204 ADAMTS7Q9UKP4 1686 aa11.14□□□□□ -0.63
LRRC49-208ENST00000558204 VEGFBP49765 207 aa11.14□□□□□ -0.63
LRRC49-208ENST00000558204 FAM161AQ3B820 660 aa11.14□□□□□ -0.63
LRRC49-208ENST00000558204 EAPPQ56P03 285 aaPredicted RBP11.14□□□□□ -0.63
LRRC49-208ENST00000558204 CHRDL2Q6WN34 429 aa11.14□□□□□ -0.63
LRRC49-208ENST00000558204 CCDC24Q8N4L8 307 aa11.14□□□□□ -0.63
LRRC49-208ENST00000558204 SLC52A2Q9HAB3 445 aa11.14□□□□□ -0.63
LRRC49-208ENST00000558204 BCL2L12Q9HB09 334 aa11.14□□□□□ -0.63
LRRC49-208ENST00000558204 PDZRN3Q9UPQ7 1066 aa11.14□□□□□ -0.63
LRRC49-208ENST00000558204 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
LRRC49-208ENST00000558204 ZNF330Q9Y3S2 320 aaPredicted RBP11.14□□□□□ -0.63
LRRC49-208ENST00000558204 NRXN2Q9P2S2 1712 aa11.13□□□□□ -0.63
LRRC49-208ENST00000558204 TMEM88BA6NKF7 163 aa11.13□□□□□ -0.63
LRRC49-208ENST00000558204 AKAP4Q5JQC9 854 aa11.13□□□□□ -0.63
LRRC49-208ENST00000558204 LDHDQ86WU2 507 aa11.13□□□□□ -0.63
LRRC49-208ENST00000558204 A0A087WZG4 1122 aa11.12□□□□□ -0.63
LRRC49-208ENST00000558204 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
LRRC49-208ENST00000558204 ABHD8Q96I13 439 aa11.12□□□□□ -0.63
LRRC49-208ENST00000558204 BRIP1Q9BX63 1249 aa11.12□□□□□ -0.63
LRRC49-208ENST00000558204 LGR6Q9HBX8 967 aa11.12□□□□□ -0.63
LRRC49-208ENST00000558204 SCN11AQ9UI33 1791 aa11.11□□□□□ -0.63
LRRC49-208ENST00000558204 STARD3NLO95772 234 aa11.11□□□□□ -0.63
LRRC49-208ENST00000558204 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
LRRC49-208ENST00000558204 TBC1D9BQ66K14 1250 aa11.11□□□□□ -0.63
LRRC49-208ENST00000558204 MORC1Q86VD1 984 aa11.11□□□□□ -0.63
LRRC49-208ENST00000558204 TTC5Q8N0Z6 440 aa11.11□□□□□ -0.63
LRRC49-208ENST00000558204 CNKSR1Q969H4 720 aa11.11□□□□□ -0.63
LRRC49-208ENST00000558204 TAF1DQ9H5J8 278 aaPredicted RBP11.11□□□□□ -0.63
LRRC49-208ENST00000558204 WBP1LQ9NX94 342 aa11.11□□□□□ -0.63
LRRC49-208ENST00000558204 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
LRRC49-208ENST00000558204 PASKQ96RG2 1323 aa11.1□□□□□ -0.63
LRRC49-208ENST00000558204 LTBP3Q9NS15 1303 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms