RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 DBF4Q9UBU7 674 aaPredicted RBP18.41■□□□□ 0.54
ARHGEF40-208ENST00000557498 ASAP1Q9ULH1 1129 aa18.41■□□□□ 0.54
ARHGEF40-208ENST00000557498 B4GALNT3Q6L9W6 998 aa18.4■□□□□ 0.54
ARHGEF40-208ENST00000557498 ITPRIPQ8IWB1 547 aa18.4■□□□□ 0.54
ARHGEF40-208ENST00000557498 SEPT12Q8IYM1 358 aa18.4■□□□□ 0.54
ARHGEF40-208ENST00000557498 ACSBG1Q96GR2 724 aa18.4■□□□□ 0.54
ARHGEF40-208ENST00000557498 NHSQ6T4R5 1651 aa18.4■□□□□ 0.54
ARHGEF40-208ENST00000557498 AAMPQ13685 434 aa18.39■□□□□ 0.53
ARHGEF40-208ENST00000557498 DDX19BQ9UMR2 479 aa18.39■□□□□ 0.53
ARHGEF40-208ENST00000557498 PXDNLA1KZ92 1463 aa18.39■□□□□ 0.53
ARHGEF40-208ENST00000557498 PTCD1O75127 700 aaKnown RBP18.38■□□□□ 0.53
ARHGEF40-208ENST00000557498 VSIG10Q8N0Z9 540 aa18.38■□□□□ 0.53
ARHGEF40-208ENST00000557498 CCDC136Q96JN2 1154 aa18.38■□□□□ 0.53
ARHGEF40-208ENST00000557498 DDX21Q9NR30 783 aaKnown RBP eCLIP18.38■□□□□ 0.53
ARHGEF40-208ENST00000557498 USP16Q9Y5T5 823 aa18.38■□□□□ 0.53
ARHGEF40-208ENST00000557498 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
ARHGEF40-208ENST00000557498 KAT6BQ8WYB5 2073 aa18.37■□□□□ 0.53
ARHGEF40-208ENST00000557498 ANXA1P04083 346 aa18.37■□□□□ 0.53
ARHGEF40-208ENST00000557498 FKBP5Q13451 457 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF40-208ENST00000557498 PDIA6Q15084 440 aa18.37■□□□□ 0.53
ARHGEF40-208ENST00000557498 PROSER3Q2NL68 480 aa18.37■□□□□ 0.53
ARHGEF40-208ENST00000557498 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
ARHGEF40-208ENST00000557498 HYPKQ9NX55 129 aa18.37■□□□□ 0.53
ARHGEF40-208ENST00000557498 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF40-208ENST00000557498 TJP1Q07157 1748 aa18.37■□□□□ 0.53
ARHGEF40-208ENST00000557498 INTS3Q68E01 1043 aaKnown RBP18.36■□□□□ 0.53
ARHGEF40-208ENST00000557498 BRWD3Q6RI45 1802 aa18.36■□□□□ 0.53
ARHGEF40-208ENST00000557498 SBF2Q86WG5 1849 aa18.35■□□□□ 0.53
ARHGEF40-208ENST00000557498 RBM6P78332 1123 aaKnown RBP18.35■□□□□ 0.53
ARHGEF40-208ENST00000557498 RBM42Q9BTD8 480 aaKnown RBP18.35■□□□□ 0.53
ARHGEF40-208ENST00000557498 F6X3S4 739 aa18.34■□□□□ 0.53
ARHGEF40-208ENST00000557498 TEX13AQ9BXU3 409 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF40-208ENST00000557498 BTAF1O14981 1849 aa18.34■□□□□ 0.53
ARHGEF40-208ENST00000557498 KCNQ2O43526 872 aa18.33■□□□□ 0.52
ARHGEF40-208ENST00000557498 CCT4P50991 539 aaKnown RBP18.33■□□□□ 0.52
ARHGEF40-208ENST00000557498 DNAJC10Q8IXB1 793 aa18.33■□□□□ 0.52
ARHGEF40-208ENST00000557498 SMARCC1Q92922 1105 aaPredicted RBP18.33■□□□□ 0.52
ARHGEF40-208ENST00000557498 CHMP4BQ9H444 224 aaKnown RBP18.33■□□□□ 0.52
ARHGEF40-208ENST00000557498 PALLDQ8WX93 1383 aa18.32■□□□□ 0.52
ARHGEF40-208ENST00000557498 ZNF831Q5JPB2 1677 aa18.32■□□□□ 0.52
ARHGEF40-208ENST00000557498 MYL6BP14649 208 aa18.32■□□□□ 0.52
ARHGEF40-208ENST00000557498 LRP10Q7Z4F1 713 aa18.32■□□□□ 0.52
ARHGEF40-208ENST00000557498 ADCY9O60503 1353 aa18.31■□□□□ 0.52
ARHGEF40-208ENST00000557498 SLC4A10Q6U841 1118 aa18.31■□□□□ 0.52
ARHGEF40-208ENST00000557498 SLC4A9Q96Q91 983 aa18.31■□□□□ 0.52
ARHGEF40-208ENST00000557498 ZBTB40Q9NUA8 1239 aa18.31■□□□□ 0.52
ARHGEF40-208ENST00000557498 NBPF26B4DH59 902 aa18.3■□□□□ 0.52
ARHGEF40-208ENST00000557498 ZBTB7BO15156 539 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF40-208ENST00000557498 DDX58O95786 925 aaKnown RBP18.3■□□□□ 0.52
ARHGEF40-208ENST00000557498 FAM182BQ5T319 152 aa18.3■□□□□ 0.52
ARHGEF40-208ENST00000557498 NBPF14Q5TI25 921 aa18.3■□□□□ 0.52
ARHGEF40-208ENST00000557498 NBPF10Q6P3W6 841 aaKnown RBP18.3■□□□□ 0.52
ARHGEF40-208ENST00000557498 KRT27Q7Z3Y8 459 aa18.3■□□□□ 0.52
ARHGEF40-208ENST00000557498 NBPF15Q8N660 670 aa18.3■□□□□ 0.52
ARHGEF40-208ENST00000557498 XAGE3Q8WTP9 111 aa18.3■□□□□ 0.52
ARHGEF40-208ENST00000557498 ATP10DQ9P241 1426 aa18.3■□□□□ 0.52
ARHGEF40-208ENST00000557498 PI4KAP2A4QPH2 592 aa18.29■□□□□ 0.52
ARHGEF40-208ENST00000557498 STARD3NLO95772 234 aa18.29■□□□□ 0.52
ARHGEF40-208ENST00000557498 PIP4K2AP48426 406 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF40-208ENST00000557498 KSR2Q6VAB6 950 aa18.29■□□□□ 0.52
ARHGEF40-208ENST00000557498 PI4KAP1Q8N8J0 262 aa18.29■□□□□ 0.52
ARHGEF40-208ENST00000557498 DNAAF4Q8WXU2 420 aa18.29■□□□□ 0.52
ARHGEF40-208ENST00000557498 RREB1Q92766 1687 aa18.28■□□□□ 0.52
ARHGEF40-208ENST00000557498 ARFGEF2Q9Y6D5 1785 aa18.28■□□□□ 0.52
ARHGEF40-208ENST00000557498 LOC102724428A0A0B4J2F2 783 aa18.28■□□□□ 0.52
ARHGEF40-208ENST00000557498 A1BGP04217 495 aa18.28■□□□□ 0.52
ARHGEF40-208ENST00000557498 SIK1P57059 783 aa18.28■□□□□ 0.52
ARHGEF40-208ENST00000557498 PCDHB15Q9Y5E8 787 aa18.28■□□□□ 0.52
ARHGEF40-208ENST00000557498 COL5A3P25940 1745 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF40-208ENST00000557498 NUP188Q5SRE5 1749 aa18.27■□□□□ 0.52
ARHGEF40-208ENST00000557498 CYP19A1P11511 503 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF40-208ENST00000557498 RXRBP28702 533 aa18.27■□□□□ 0.52
ARHGEF40-208ENST00000557498 AIMP1Q12904 312 aaKnown RBP18.27■□□□□ 0.52
ARHGEF40-208ENST00000557498 COPS6Q7L5N1 327 aa18.27■□□□□ 0.52
ARHGEF40-208ENST00000557498 RGS17Q9UGC6 210 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF40-208ENST00000557498 MAP3K2Q9Y2U5 619 aa18.27■□□□□ 0.52
ARHGEF40-208ENST00000557498 PTF1AQ7RTS3 328 aa18.26■□□□□ 0.51
ARHGEF40-208ENST00000557498 LY75O60449 1722 aa18.26■□□□□ 0.51
ARHGEF40-208ENST00000557498 KDM2BQ8NHM5 1336 aa18.25■□□□□ 0.51
ARHGEF40-208ENST00000557498 ATP6V1AP38606 617 aa18.25■□□□□ 0.51
ARHGEF40-208ENST00000557498 BEND3Q5T5X7 828 aa18.25■□□□□ 0.51
ARHGEF40-208ENST00000557498 FAM196AQ6ZSG2 479 aa18.25■□□□□ 0.51
ARHGEF40-208ENST00000557498 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
ARHGEF40-208ENST00000557498 CENPQQ7L2Z9 268 aaPredicted RBP18.24■□□□□ 0.51
ARHGEF40-208ENST00000557498 RIC3Q7Z5B4 369 aa18.24■□□□□ 0.51
ARHGEF40-208ENST00000557498 MEIS3Q99687 375 aa18.24■□□□□ 0.51
ARHGEF40-208ENST00000557498 ITPK1Q13572 414 aa18.23■□□□□ 0.51
ARHGEF40-208ENST00000557498 BCL11BQ9C0K0 894 aaPredicted RBP18.23■□□□□ 0.51
ARHGEF40-208ENST00000557498 IBTKQ9P2D0 1353 aaPredicted RBP18.22■□□□□ 0.51
ARHGEF40-208ENST00000557498 ALDH1L1O75891 902 aa18.22■□□□□ 0.51
ARHGEF40-208ENST00000557498 POTEAQ6S8J7 498 aa18.22■□□□□ 0.51
ARHGEF40-208ENST00000557498 ANKRD13DQ6ZTN6 518 aa18.22■□□□□ 0.51
ARHGEF40-208ENST00000557498 PLBD2Q8NHP8 589 aa18.22■□□□□ 0.51
ARHGEF40-208ENST00000557498 METTL22Q9BUU2 404 aaPredicted RBP18.22■□□□□ 0.51
ARHGEF40-208ENST00000557498 C1orf115Q9H7X2 142 aa18.22■□□□□ 0.51
ARHGEF40-208ENST00000557498 ZBTB1Q9Y2K1 713 aa18.22■□□□□ 0.51
ARHGEF40-208ENST00000557498 IGHDP01880 384 aa18.21■□□□□ 0.51
ARHGEF40-208ENST00000557498 GNAI3P08754 354 aa18.21■□□□□ 0.51
ARHGEF40-208ENST00000557498 TTLL7Q6ZT98 887 aa18.21■□□□□ 0.51
ARHGEF40-208ENST00000557498 LINS1Q8NG48 757 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms