RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 DNAJC10Q8IXB1 793 aa16.75■□□□□ 0.27
RTN1-208ENST00000557422 POLR3GLQ9BT43 218 aa16.74■□□□□ 0.27
RTN1-208ENST00000557422 AFDNP55196 1824 aaKnown RBP16.74■□□□□ 0.27
RTN1-208ENST00000557422 CYP19A1P11511 503 aaPredicted RBP16.73■□□□□ 0.27
RTN1-208ENST00000557422 TTLL6Q8N841 843 aa16.73■□□□□ 0.27
RTN1-208ENST00000557422 NARFQ9UHQ1 456 aa16.73■□□□□ 0.27
RTN1-208ENST00000557422 POTECB2RU33 542 aa16.72■□□□□ 0.27
RTN1-208ENST00000557422 SULT6B1Q6IMI4 303 aa16.72■□□□□ 0.27
RTN1-208ENST00000557422 BCL2L12Q9HB09 334 aa16.72■□□□□ 0.27
RTN1-208ENST00000557422 NRXN2Q9P2S2 1712 aa16.72■□□□□ 0.27
RTN1-208ENST00000557422 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
RTN1-208ENST00000557422 CCDC88AQ3V6T2 1871 aa16.71■□□□□ 0.27
RTN1-208ENST00000557422 NFKBIEO00221 500 aa16.71■□□□□ 0.27
RTN1-208ENST00000557422 SERPINB2P05120 415 aa16.71■□□□□ 0.27
RTN1-208ENST00000557422 C2CD5Q86YS7 1000 aa16.71■□□□□ 0.27
RTN1-208ENST00000557422 DLEC1Q9Y238 1755 aa16.7■□□□□ 0.26
RTN1-208ENST00000557422 SLC52A2Q9HAB3 445 aa16.7■□□□□ 0.26
RTN1-208ENST00000557422 LGR6Q9HBX8 967 aa16.7■□□□□ 0.26
RTN1-208ENST00000557422 COL15A1P39059 1388 aa16.69■□□□□ 0.26
RTN1-208ENST00000557422 H0YIN7 160 aa16.69■□□□□ 0.26
RTN1-208ENST00000557422 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
RTN1-208ENST00000557422 AKAP4Q5JQC9 854 aa16.69■□□□□ 0.26
RTN1-208ENST00000557422 PANK3Q9H999 370 aa16.69■□□□□ 0.26
RTN1-208ENST00000557422 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
RTN1-208ENST00000557422 TIAM2Q8IVF5 1701 aa16.69■□□□□ 0.26
RTN1-208ENST00000557422 DPY19L2Q6NUT2 758 aa16.68■□□□□ 0.26
RTN1-208ENST00000557422 CARMIL3Q8ND23 1372 aa16.67■□□□□ 0.26
RTN1-208ENST00000557422 IL13P35225 146 aa16.67■□□□□ 0.26
RTN1-208ENST00000557422 MORC1Q86VD1 984 aa16.67■□□□□ 0.26
RTN1-208ENST00000557422 RNMTO43148 476 aaKnown RBP16.66■□□□□ 0.26
RTN1-208ENST00000557422 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.25
RTN1-208ENST00000557422 ERFEQ4G0M1 354 aa16.64■□□□□ 0.25
RTN1-208ENST00000557422 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
RTN1-208ENST00000557422 BICDL1Q6ZP65 573 aa16.64■□□□□ 0.25
RTN1-208ENST00000557422 VSIG10Q8N0Z9 540 aa16.64■□□□□ 0.25
RTN1-208ENST00000557422 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.25
RTN1-208ENST00000557422 CREBZFQ9NS37 354 aa16.64■□□□□ 0.25
RTN1-208ENST00000557422 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
RTN1-208ENST00000557422 MRC1P22897 1456 aa16.64■□□□□ 0.25
RTN1-208ENST00000557422 C21orf2O43822 256 aa16.63■□□□□ 0.25
RTN1-208ENST00000557422 MKRN1Q9UHC7 482 aaKnown RBP16.63■□□□□ 0.25
RTN1-208ENST00000557422 DICER1Q9UPY3 1922 aaKnown RBP16.62■□□□□ 0.25
RTN1-208ENST00000557422 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
RTN1-208ENST00000557422 BRIP1Q9BX63 1249 aa16.62■□□□□ 0.25
RTN1-208ENST00000557422 TIMELESSQ9UNS1 1208 aa16.62■□□□□ 0.25
RTN1-208ENST00000557422 PDZRN3Q9UPQ7 1066 aa16.62■□□□□ 0.25
RTN1-208ENST00000557422 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
RTN1-208ENST00000557422 ANKRD31Q8N7Z5 1873 aa16.61■□□□□ 0.25
RTN1-208ENST00000557422 POTEIP0CG38 1075 aa16.61■□□□□ 0.25
RTN1-208ENST00000557422 POTEJP0CG39 1038 aa16.61■□□□□ 0.25
RTN1-208ENST00000557422 PDE6BP35913 854 aa16.61■□□□□ 0.25
RTN1-208ENST00000557422 TBC1D9BQ66K14 1250 aa16.61■□□□□ 0.25
RTN1-208ENST00000557422 A0A087WZG4 1122 aa16.6■□□□□ 0.25
RTN1-208ENST00000557422 FOXN1O15353 648 aa16.6■□□□□ 0.25
RTN1-208ENST00000557422 DDNO94850 711 aaPredicted RBP16.6■□□□□ 0.25
RTN1-208ENST00000557422 STARD3NLO95772 234 aa16.6■□□□□ 0.25
RTN1-208ENST00000557422 CCDC24Q8N4L8 307 aa16.6■□□□□ 0.25
RTN1-208ENST00000557422 VIRMAQ69YN4 1812 aaKnown RBP16.6■□□□□ 0.25
RTN1-208ENST00000557422 LTBP3Q9NS15 1303 aa16.6■□□□□ 0.25
RTN1-208ENST00000557422 HMOX1P09601 288 aa16.59■□□□□ 0.25
RTN1-208ENST00000557422 MTHFSDQ2M296 383 aaKnown RBP16.59■□□□□ 0.25
RTN1-208ENST00000557422 PRR5LQ6MZQ0 368 aa16.59■□□□□ 0.25
RTN1-208ENST00000557422 TAOK3Q9H2K8 898 aa16.58■□□□□ 0.24
RTN1-208ENST00000557422 CNTNAP1P78357 1384 aa16.58■□□□□ 0.24
RTN1-208ENST00000557422 COL11A2P13942 1736 aaPredicted RBP16.58■□□□□ 0.24
RTN1-208ENST00000557422 UBR2Q8IWV8 1755 aa16.58■□□□□ 0.24
RTN1-208ENST00000557422 PRDM10Q9NQV6 1147 aa16.57■□□□□ 0.24
RTN1-208ENST00000557422 TBC1D2BQ9UPU7 963 aa16.57■□□□□ 0.24
RTN1-208ENST00000557422 KNSTRNQ9Y448 316 aa16.57■□□□□ 0.24
RTN1-208ENST00000557422 PASKQ96RG2 1323 aa16.56■□□□□ 0.24
RTN1-208ENST00000557422 HSPA5P11021 654 aaKnown RBP16.56■□□□□ 0.24
RTN1-208ENST00000557422 EIF4G2P78344 907 aaKnown RBP eCLIP16.56■□□□□ 0.24
RTN1-208ENST00000557422 CNKSR1Q969H4 720 aa16.56■□□□□ 0.24
RTN1-208ENST00000557422 ZNF496Q96IT1 587 aaPredicted RBP16.56■□□□□ 0.24
RTN1-208ENST00000557422 SLX4Q8IY92 1834 aa16.56■□□□□ 0.24
RTN1-208ENST00000557422 STYK1Q6J9G0 422 aa16.55■□□□□ 0.24
RTN1-208ENST00000557422 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
RTN1-208ENST00000557422 LDHDQ86WU2 507 aa16.55■□□□□ 0.24
RTN1-208ENST00000557422 TTC5Q8N0Z6 440 aa16.55■□□□□ 0.24
RTN1-208ENST00000557422 CTCFP49711 727 aaPredicted RBP16.54■□□□□ 0.24
RTN1-208ENST00000557422 VEGFBP49765 207 aa16.54■□□□□ 0.24
RTN1-208ENST00000557422 L3MBTL3Q96JM7 780 aaPredicted RBP16.54■□□□□ 0.24
RTN1-208ENST00000557422 SETDB2Q96T68 719 aa16.54■□□□□ 0.24
RTN1-208ENST00000557422 TEX13AQ9BXU3 409 aaPredicted RBP16.54■□□□□ 0.24
RTN1-208ENST00000557422 TAF1DQ9H5J8 278 aaPredicted RBP16.54■□□□□ 0.24
RTN1-208ENST00000557422 ZNF330Q9Y3S2 320 aaPredicted RBP16.54■□□□□ 0.24
RTN1-208ENST00000557422 HEG1Q9ULI3 1381 aa16.53■□□□□ 0.24
RTN1-208ENST00000557422 SCN7AQ01118 1682 aa16.53■□□□□ 0.24
RTN1-208ENST00000557422 IQCA1LA6NCM1 817 aa16.53■□□□□ 0.24
RTN1-208ENST00000557422 ITGBL1O95965 494 aaPredicted RBP16.53■□□□□ 0.24
RTN1-208ENST00000557422 SRGNP10124 158 aa16.53■□□□□ 0.24
RTN1-208ENST00000557422 IL6STP40189 918 aaPredicted RBP16.53■□□□□ 0.24
RTN1-208ENST00000557422 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
RTN1-208ENST00000557422 SOGA3Q5TF21 947 aa16.53■□□□□ 0.24
RTN1-208ENST00000557422 CNBD1Q8NA66 436 aa16.53■□□□□ 0.24
RTN1-208ENST00000557422 AIDAQ96BJ3 306 aa16.53■□□□□ 0.24
RTN1-208ENST00000557422 TMEM88BA6NKF7 163 aa16.52■□□□□ 0.24
RTN1-208ENST00000557422 CAMTA2O94983 1202 aa16.52■□□□□ 0.24
RTN1-208ENST00000557422 A1BGP04217 495 aa16.52■□□□□ 0.24
RTN1-208ENST00000557422 ZNF790Q6PG37 636 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms