RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 SOS1Q07889 1333 aaPredicted RBP17.34■□□□□ 0.37
PSEN1-221ENST00000557293 CYP19A1P11511 503 aaPredicted RBP17.33■□□□□ 0.36
PSEN1-221ENST00000557293 ZPR1O75312 459 aa17.32■□□□□ 0.36
PSEN1-221ENST00000557293 NARFQ9UHQ1 456 aa17.32■□□□□ 0.36
PSEN1-221ENST00000557293 AFDNP55196 1824 aaKnown RBP17.32■□□□□ 0.36
PSEN1-221ENST00000557293 NRXN2Q9P2S2 1712 aa17.32■□□□□ 0.36
PSEN1-221ENST00000557293 PCNTO95613 3336 aa17.32■□□□□ 0.36
PSEN1-221ENST00000557293 SERPINB2P05120 415 aa17.31■□□□□ 0.36
PSEN1-221ENST00000557293 TTLL6Q8N841 843 aa17.31■□□□□ 0.36
PSEN1-221ENST00000557293 LGR6Q9HBX8 967 aa17.31■□□□□ 0.36
PSEN1-221ENST00000557293 C1orf141Q5JVX7 400 aa17.3■□□□□ 0.36
PSEN1-221ENST00000557293 CCDC88AQ3V6T2 1871 aa17.29■□□□□ 0.36
PSEN1-221ENST00000557293 CARMIL3Q8ND23 1372 aa17.28■□□□□ 0.36
PSEN1-221ENST00000557293 SLC39A6Q13433 755 aa17.28■□□□□ 0.36
PSEN1-221ENST00000557293 SULT6B1Q6IMI4 303 aa17.28■□□□□ 0.36
PSEN1-221ENST00000557293 C2CD5Q86YS7 1000 aa17.28■□□□□ 0.36
PSEN1-221ENST00000557293 SLC52A2Q9HAB3 445 aa17.28■□□□□ 0.36
PSEN1-221ENST00000557293 ZBTB1Q9Y2K1 713 aa17.28■□□□□ 0.36
PSEN1-221ENST00000557293 SCN11AQ9UI33 1791 aa17.27■□□□□ 0.35
PSEN1-221ENST00000557293 DLEC1Q9Y238 1755 aa17.27■□□□□ 0.35
PSEN1-221ENST00000557293 POTEIP0CG38 1075 aa17.26■□□□□ 0.35
PSEN1-221ENST00000557293 POTEJP0CG39 1038 aa17.26■□□□□ 0.35
PSEN1-221ENST00000557293 IL13P35225 146 aa17.26■□□□□ 0.35
PSEN1-221ENST00000557293 COL15A1P39059 1388 aa17.26■□□□□ 0.35
PSEN1-221ENST00000557293 H0YIN7 160 aa17.25■□□□□ 0.35
PSEN1-221ENST00000557293 AKAP4Q5JQC9 854 aa17.25■□□□□ 0.35
PSEN1-221ENST00000557293 DPY19L2Q6NUT2 758 aa17.25■□□□□ 0.35
PSEN1-221ENST00000557293 PANK3Q9H999 370 aa17.25■□□□□ 0.35
PSEN1-221ENST00000557293 FOXN1O15353 648 aa17.24■□□□□ 0.35
PSEN1-221ENST00000557293 RNMTO43148 476 aaKnown RBP17.24■□□□□ 0.35
PSEN1-221ENST00000557293 CHADLQ6NUI6 762 aa17.24■□□□□ 0.35
PSEN1-221ENST00000557293 CREBZFQ9NS37 354 aa17.24■□□□□ 0.35
PSEN1-221ENST00000557293 MKRN1Q9UHC7 482 aaKnown RBP17.24■□□□□ 0.35
PSEN1-221ENST00000557293 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
PSEN1-221ENST00000557293 EIF5P55010 431 aaKnown RBP17.23■□□□□ 0.35
PSEN1-221ENST00000557293 C21orf2O43822 256 aa17.22■□□□□ 0.35
PSEN1-221ENST00000557293 ERFEQ4G0M1 354 aa17.22■□□□□ 0.35
PSEN1-221ENST00000557293 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
PSEN1-221ENST00000557293 POLR3GLQ9BT43 218 aa17.22■□□□□ 0.35
PSEN1-221ENST00000557293 DDNO94850 711 aaPredicted RBP17.21■□□□□ 0.35
PSEN1-221ENST00000557293 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
PSEN1-221ENST00000557293 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.35
PSEN1-221ENST00000557293 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
PSEN1-221ENST00000557293 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
PSEN1-221ENST00000557293 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
PSEN1-221ENST00000557293 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
PSEN1-221ENST00000557293 MRC1P22897 1456 aa17.2■□□□□ 0.34
PSEN1-221ENST00000557293 DICER1Q9UPY3 1922 aaKnown RBP17.2■□□□□ 0.34
PSEN1-221ENST00000557293 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
PSEN1-221ENST00000557293 ZNF622Q969S3 477 aaKnown RBP eCLIP17.2■□□□□ 0.34
PSEN1-221ENST00000557293 BRIP1Q9BX63 1249 aa17.2■□□□□ 0.34
PSEN1-221ENST00000557293 PRDM10Q9NQV6 1147 aa17.2■□□□□ 0.34
PSEN1-221ENST00000557293 FER1L6Q2WGJ9 1857 aa17.2■□□□□ 0.34
PSEN1-221ENST00000557293 PASKQ96RG2 1323 aa17.2■□□□□ 0.34
PSEN1-221ENST00000557293 LTBP3Q9NS15 1303 aa17.2■□□□□ 0.34
PSEN1-221ENST00000557293 PRR5LQ6MZQ0 368 aa17.19■□□□□ 0.34
PSEN1-221ENST00000557293 CNTNAP1P78357 1384 aa17.18■□□□□ 0.34
PSEN1-221ENST00000557293 ITGBL1O95965 494 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-221ENST00000557293 PDE6BP35913 854 aa17.17■□□□□ 0.34
PSEN1-221ENST00000557293 MTHFSDQ2M296 383 aaKnown RBP17.17■□□□□ 0.34
PSEN1-221ENST00000557293 PDZRN3Q9UPQ7 1066 aa17.17■□□□□ 0.34
PSEN1-221ENST00000557293 VEGFBP49765 207 aa17.16■□□□□ 0.34
PSEN1-221ENST00000557293 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
PSEN1-221ENST00000557293 HMOX1P09601 288 aa17.15■□□□□ 0.34
PSEN1-221ENST00000557293 C7orf43Q8WVR3 580 aa17.15■□□□□ 0.34
PSEN1-221ENST00000557293 WBP1LQ9NX94 342 aa17.15■□□□□ 0.34
PSEN1-221ENST00000557293 TBC1D2BQ9UPU7 963 aa17.15■□□□□ 0.34
PSEN1-221ENST00000557293 COL11A2P13942 1736 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-221ENST00000557293 A0A087WZG4 1122 aa17.14■□□□□ 0.33
PSEN1-221ENST00000557293 SLC34A2O95436 690 aa17.14■□□□□ 0.33
PSEN1-221ENST00000557293 SRGNP10124 158 aa17.14■□□□□ 0.33
PSEN1-221ENST00000557293 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-221ENST00000557293 L3MBTL3Q96JM7 780 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-221ENST00000557293 TAOK3Q9H2K8 898 aa17.14■□□□□ 0.33
PSEN1-221ENST00000557293 TAF1DQ9H5J8 278 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-221ENST00000557293 STARD3NLO95772 234 aa17.13■□□□□ 0.33
PSEN1-221ENST00000557293 CTCFP49711 727 aaPredicted RBP17.13■□□□□ 0.33
PSEN1-221ENST00000557293 STYK1Q6J9G0 422 aa17.13■□□□□ 0.33
PSEN1-221ENST00000557293 TIMELESSQ9UNS1 1208 aa17.13■□□□□ 0.33
PSEN1-221ENST00000557293 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
PSEN1-221ENST00000557293 PRPF40BQ6NWY9 871 aaKnown RBP17.12■□□□□ 0.33
PSEN1-221ENST00000557293 LDHDQ86WU2 507 aa17.12■□□□□ 0.33
PSEN1-221ENST00000557293 CNKSR1Q969H4 720 aa17.12■□□□□ 0.33
PSEN1-221ENST00000557293 VIRMAQ69YN4 1812 aaKnown RBP17.12■□□□□ 0.33
PSEN1-221ENST00000557293 TMEM88BA6NKF7 163 aa17.11■□□□□ 0.33
PSEN1-221ENST00000557293 CAMTA2O94983 1202 aa17.11■□□□□ 0.33
PSEN1-221ENST00000557293 HSPA5P11021 654 aaKnown RBP17.11■□□□□ 0.33
PSEN1-221ENST00000557293 LBX1P52954 281 aa17.11■□□□□ 0.33
PSEN1-221ENST00000557293 IL17REQ8NFR9 667 aa17.11■□□□□ 0.33
PSEN1-221ENST00000557293 A1BGP04217 495 aa17.1■□□□□ 0.33
PSEN1-221ENST00000557293 IL6STP40189 918 aaPredicted RBP17.1■□□□□ 0.33
PSEN1-221ENST00000557293 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
PSEN1-221ENST00000557293 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
PSEN1-221ENST00000557293 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
PSEN1-221ENST00000557293 ZNF790Q6PG37 636 aa17.09■□□□□ 0.33
PSEN1-221ENST00000557293 MASTLQ96GX5 879 aa17.09■□□□□ 0.33
PSEN1-221ENST00000557293 SETDB2Q96T68 719 aa17.09■□□□□ 0.33
PSEN1-221ENST00000557293 ZNF541Q9H0D2 1346 aa17.08■□□□□ 0.32
PSEN1-221ENST00000557293 HSPA8P11142 646 aaKnown RBP17.08■□□□□ 0.32
PSEN1-221ENST00000557293 CNBD1Q8NA66 436 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms