RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 MTHFSDQ2M296 383 aaKnown RBP14.55□□□□□ -0.08
HNRNPC-230ENST00000557201 PIM2Q9P1W9 311 aa14.55□□□□□ -0.08
HNRNPC-230ENST00000557201 COL3A1P02461 1466 aaPredicted RBP14.53□□□□□ -0.08
HNRNPC-230ENST00000557201 USPL1Q5W0Q7 1092 aa14.53□□□□□ -0.08
HNRNPC-230ENST00000557201 BCL2L12Q9HB09 334 aa14.53□□□□□ -0.08
HNRNPC-230ENST00000557201 NRXN2Q9P2S2 1712 aa14.52□□□□□ -0.08
HNRNPC-230ENST00000557201 DIAPH1O60610 1272 aaKnown RBP14.52□□□□□ -0.08
HNRNPC-230ENST00000557201 TOMM70O94826 608 aa14.52□□□□□ -0.08
HNRNPC-230ENST00000557201 CHRNA5P30532 468 aa14.52□□□□□ -0.08
HNRNPC-230ENST00000557201 DALRD3Q5D0E6 543 aaKnown RBP14.52□□□□□ -0.08
HNRNPC-230ENST00000557201 C9orf131Q5VYM1 1079 aa14.52□□□□□ -0.08
HNRNPC-230ENST00000557201 VSIG10Q8N0Z9 540 aa14.52□□□□□ -0.08
HNRNPC-230ENST00000557201 NMRK2Q9NPI5 230 aa14.52□□□□□ -0.08
HNRNPC-230ENST00000557201 NARFQ9UHQ1 456 aa14.52□□□□□ -0.08
HNRNPC-230ENST00000557201 ZBTB1Q9Y2K1 713 aa14.52□□□□□ -0.08
HNRNPC-230ENST00000557201 VIRMAQ69YN4 1812 aaKnown RBP14.52□□□□□ -0.09
HNRNPC-230ENST00000557201 NPC1L1Q9UHC9 1359 aa14.51□□□□□ -0.09
HNRNPC-230ENST00000557201 UBR2Q8IWV8 1755 aa14.51□□□□□ -0.09
HNRNPC-230ENST00000557201 ZPR1O75312 459 aa14.51□□□□□ -0.09
HNRNPC-230ENST00000557201 NFIXQ14938 502 aa14.51□□□□□ -0.09
HNRNPC-230ENST00000557201 IFFO2Q5TF58 517 aa14.51□□□□□ -0.09
HNRNPC-230ENST00000557201 COL15A1P39059 1388 aa14.51□□□□□ -0.09
HNRNPC-230ENST00000557201 CC2D1BQ5T0F9 858 aaKnown RBP14.5□□□□□ -0.09
HNRNPC-230ENST00000557201 DNAJC5GQ8N7S2 189 aa14.49□□□□□ -0.09
HNRNPC-230ENST00000557201 AFDNP55196 1824 aaKnown RBP14.49□□□□□ -0.09
HNRNPC-230ENST00000557201 APLP1P51693 650 aa14.48□□□□□ -0.09
HNRNPC-230ENST00000557201 EIF5P55010 431 aaKnown RBP14.47□□□□□ -0.09
HNRNPC-230ENST00000557201 IL17REQ8NFR9 667 aa14.47□□□□□ -0.09
HNRNPC-230ENST00000557201 SBF1O95248 1867 aa14.47□□□□□ -0.09
HNRNPC-230ENST00000557201 RBM46Q8TBY0 533 aaKnown RBP14.47□□□□□ -0.09
HNRNPC-230ENST00000557201 RNF181Q9P0P0 153 aa14.47□□□□□ -0.09
HNRNPC-230ENST00000557201 DLEC1Q9Y238 1755 aa14.46□□□□□ -0.09
HNRNPC-230ENST00000557201 SERPINB2P05120 415 aa14.46□□□□□ -0.1
HNRNPC-230ENST00000557201 PRELPP51888 382 aa14.46□□□□□ -0.1
HNRNPC-230ENST00000557201 ZNF496Q96IT1 587 aaPredicted RBP14.46□□□□□ -0.1
HNRNPC-230ENST00000557201 CARMIL3Q8ND23 1372 aa14.45□□□□□ -0.1
HNRNPC-230ENST00000557201 SIPA1L3O60292 1781 aaPredicted RBP14.45□□□□□ -0.1
HNRNPC-230ENST00000557201 CANXP27824 592 aaKnown RBP14.45□□□□□ -0.1
HNRNPC-230ENST00000557201 ZNF790Q6PG37 636 aa14.45□□□□□ -0.1
HNRNPC-230ENST00000557201 CEMIPQ8WUJ3 1361 aa14.45□□□□□ -0.1
HNRNPC-230ENST00000557201 HEG1Q9ULI3 1381 aa14.45□□□□□ -0.1
HNRNPC-230ENST00000557201 GNAT3A8MTJ3 354 aa14.44□□□□□ -0.1
HNRNPC-230ENST00000557201 STARD3NLO95772 234 aa14.44□□□□□ -0.1
HNRNPC-230ENST00000557201 GAS2L2Q8NHY3 880 aa14.44□□□□□ -0.1
HNRNPC-230ENST00000557201 KDM2BQ8NHM5 1336 aa14.44□□□□□ -0.1
HNRNPC-230ENST00000557201 RASSF7Q02833 373 aa14.43□□□□□ -0.1
HNRNPC-230ENST00000557201 FSTL1Q12841 308 aa14.43□□□□□ -0.1
HNRNPC-230ENST00000557201 TTC5Q8N0Z6 440 aa14.43□□□□□ -0.1
HNRNPC-230ENST00000557201 ZC3H4Q9UPT8 1303 aaKnown RBP14.43□□□□□ -0.1
HNRNPC-230ENST00000557201 SCN7AQ01118 1682 aa14.42□□□□□ -0.1
HNRNPC-230ENST00000557201 TNRC6CQ9HCJ0 1690 aaKnown RBP14.42□□□□□ -0.1
HNRNPC-230ENST00000557201 A0A087WZG4 1122 aa14.42□□□□□ -0.1
HNRNPC-230ENST00000557201 U2SURPO15042 1029 aaKnown RBP14.42□□□□□ -0.1
HNRNPC-230ENST00000557201 TBC1D9BQ66K14 1250 aa14.42□□□□□ -0.1
HNRNPC-230ENST00000557201 TTLL6Q8N841 843 aa14.42□□□□□ -0.1
HNRNPC-230ENST00000557201 PHACTR3Q96KR7 559 aa14.42□□□□□ -0.1
HNRNPC-230ENST00000557201 TEX13AQ9BXU3 409 aaPredicted RBP14.42□□□□□ -0.1
HNRNPC-230ENST00000557201 RRAGCQ9HB90 399 aa14.42□□□□□ -0.1
HNRNPC-230ENST00000557201 LMNB1P20700 586 aa14.41□□□□□ -0.1
HNRNPC-230ENST00000557201 TEFQ10587 303 aa14.41□□□□□ -0.1
HNRNPC-230ENST00000557201 C2CD5Q86YS7 1000 aa14.41□□□□□ -0.1
HNRNPC-230ENST00000557201 WDR90Q96KV7 1748 aa14.41□□□□□ -0.1
HNRNPC-230ENST00000557201 ANKRD31Q8N7Z5 1873 aa14.4□□□□□ -0.1
HNRNPC-230ENST00000557201 NFKBIEO00221 500 aa14.4□□□□□ -0.1
HNRNPC-230ENST00000557201 KCNQ3O43525 872 aa14.4□□□□□ -0.1
HNRNPC-230ENST00000557201 IL6STP40189 918 aaPredicted RBP14.4□□□□□ -0.1
HNRNPC-230ENST00000557201 RSPH6AQ9H0K4 717 aa14.4□□□□□ -0.1
HNRNPC-230ENST00000557201 H0YIN7 160 aa14.39□□□□□ -0.11
HNRNPC-230ENST00000557201 A1BGP04217 495 aa14.39□□□□□ -0.11
HNRNPC-230ENST00000557201 PRR5LQ6MZQ0 368 aa14.39□□□□□ -0.11
HNRNPC-230ENST00000557201 BICDL1Q6ZP65 573 aa14.39□□□□□ -0.11
HNRNPC-230ENST00000557201 C16orf71Q8IYS4 520 aaPredicted RBP14.39□□□□□ -0.11
HNRNPC-230ENST00000557201 FMNL2Q96PY5 1086 aa14.39□□□□□ -0.11
HNRNPC-230ENST00000557201 BRIP1Q9BX63 1249 aa14.39□□□□□ -0.11
HNRNPC-230ENST00000557201 TBC1D2BQ9UPU7 963 aa14.39□□□□□ -0.11
HNRNPC-230ENST00000557201 GLTPD2A6NH11 291 aa14.38□□□□□ -0.11
HNRNPC-230ENST00000557201 CAMTA2O94983 1202 aa14.38□□□□□ -0.11
HNRNPC-230ENST00000557201 PRKAR2BP31323 418 aa14.38□□□□□ -0.11
HNRNPC-230ENST00000557201 HTRA3P83110 453 aa14.38□□□□□ -0.11
HNRNPC-230ENST00000557201 JMYQ8N9B5 988 aa14.37□□□□□ -0.11
HNRNPC-230ENST00000557201 KLRG1Q96E93 195 aa14.37□□□□□ -0.11
HNRNPC-230ENST00000557201 PDZRN3Q9UPQ7 1066 aa14.37□□□□□ -0.11
HNRNPC-230ENST00000557201 COL11A2P13942 1736 aaPredicted RBP14.37□□□□□ -0.11
HNRNPC-230ENST00000557201 BTBD11A6QL63 1104 aa14.36□□□□□ -0.11
HNRNPC-230ENST00000557201 POTECB2RU33 542 aa14.36□□□□□ -0.11
HNRNPC-230ENST00000557201 PDE6BP35913 854 aa14.36□□□□□ -0.11
HNRNPC-230ENST00000557201 CNGB1Q14028 1251 aaPredicted RBP14.36□□□□□ -0.11
HNRNPC-230ENST00000557201 USP16Q9Y5T5 823 aa14.36□□□□□ -0.11
HNRNPC-230ENST00000557201 CCDC24Q8N4L8 307 aa14.35□□□□□ -0.11
HNRNPC-230ENST00000557201 SMC1BQ8NDV3 1235 aa14.35□□□□□ -0.11
HNRNPC-230ENST00000557201 BCORQ6W2J9 1755 aa14.35□□□□□ -0.11
HNRNPC-230ENST00000557201 TIAM2Q8IVF5 1701 aa14.35□□□□□ -0.11
HNRNPC-230ENST00000557201 PRAMEF22A3QJZ6 481 aa14.34□□□□□ -0.11
HNRNPC-230ENST00000557201 VEGFAP15692 232 aaPredicted RBP14.34□□□□□ -0.11
HNRNPC-230ENST00000557201 FER1L6Q2WGJ9 1857 aa14.34□□□□□ -0.11
HNRNPC-230ENST00000557201 SETDB2Q96T68 719 aa14.34□□□□□ -0.11
HNRNPC-230ENST00000557201 ZNF330Q9Y3S2 320 aaPredicted RBP14.34□□□□□ -0.11
HNRNPC-230ENST00000557201 LTBP3Q9NS15 1303 aa14.34□□□□□ -0.11
HNRNPC-230ENST00000557201 CCDC88AQ3V6T2 1871 aa14.34□□□□□ -0.11
HNRNPC-230ENST00000557201 C21orf2O43822 256 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms