RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 PALD1Q9ULE6 856 aa18.59■□□□□ 0.57
TMEM55B-207ENST00000557041 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.59■□□□□ 0.57
TMEM55B-207ENST00000557041 PTMAP06454 111 aaKnown RBP18.59■□□□□ 0.57
TMEM55B-207ENST00000557041 ADGRB2O60241 1585 aa18.58■□□□□ 0.57
TMEM55B-207ENST00000557041 SYTL4Q96C24 671 aaPredicted RBP18.58■□□□□ 0.57
TMEM55B-207ENST00000557041 CHMP4AQ9BY43 222 aa18.58■□□□□ 0.57
TMEM55B-207ENST00000557041 AXIN2Q9Y2T1 843 aa18.58■□□□□ 0.57
TMEM55B-207ENST00000557041 SPATA31D1Q6ZQQ2 1576 aa18.58■□□□□ 0.57
TMEM55B-207ENST00000557041 AGLP35573 1532 aa18.58■□□□□ 0.56
TMEM55B-207ENST00000557041 TMX3Q96JJ7 454 aa18.58■□□□□ 0.56
TMEM55B-207ENST00000557041 TCEANC2Q96MN5 208 aa18.58■□□□□ 0.56
TMEM55B-207ENST00000557041 DNAJC2Q99543 621 aaKnown RBP18.58■□□□□ 0.56
TMEM55B-207ENST00000557041 CIZ1Q9ULV3 898 aaPredicted RBP18.58■□□□□ 0.56
TMEM55B-207ENST00000557041 MRE11P49959 708 aa18.58■□□□□ 0.56
TMEM55B-207ENST00000557041 SKOR2Q2VWA4 1001 aaPredicted RBP18.58■□□□□ 0.56
TMEM55B-207ENST00000557041 AKAP4Q5JQC9 854 aa18.58■□□□□ 0.56
TMEM55B-207ENST00000557041 FSD1Q9BTV5 496 aa18.58■□□□□ 0.56
TMEM55B-207ENST00000557041 VPS37CA5D8V6 355 aaPredicted RBP18.57■□□□□ 0.56
TMEM55B-207ENST00000557041 FOSBP53539 338 aa18.57■□□□□ 0.56
TMEM55B-207ENST00000557041 EVA1CP58658 441 aa18.57■□□□□ 0.56
TMEM55B-207ENST00000557041 RNMTO43148 476 aaKnown RBP18.57■□□□□ 0.56
TMEM55B-207ENST00000557041 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
TMEM55B-207ENST00000557041 CHMLP26374 656 aa18.57■□□□□ 0.56
TMEM55B-207ENST00000557041 RAB3GAP1Q15042 981 aa18.57■□□□□ 0.56
TMEM55B-207ENST00000557041 TOM1L2Q6ZVM7 507 aa18.57■□□□□ 0.56
TMEM55B-207ENST00000557041 COPS6Q7L5N1 327 aa18.57■□□□□ 0.56
TMEM55B-207ENST00000557041 OVOS2A0A0J9YW53 1432 aa18.56■□□□□ 0.56
TMEM55B-207ENST00000557041 OVOS2Q6IE36 1432 aa18.56■□□□□ 0.56
TMEM55B-207ENST00000557041 DLC1Q96QB1 1528 aa18.56■□□□□ 0.56
TMEM55B-207ENST00000557041 CABP4P57796 275 aa18.56■□□□□ 0.56
TMEM55B-207ENST00000557041 AMOTQ4VCS5 1084 aa18.56■□□□□ 0.56
TMEM55B-207ENST00000557041 CDC42BPGQ6DT37 1551 aa18.56■□□□□ 0.56
TMEM55B-207ENST00000557041 USP32Q8NFA0 1604 aa18.56■□□□□ 0.56
TMEM55B-207ENST00000557041 PRDM11Q9NQV5 511 aa18.56■□□□□ 0.56
TMEM55B-207ENST00000557041 NDUFB9Q9Y6M9 179 aa18.56■□□□□ 0.56
TMEM55B-207ENST00000557041 SOS1Q07889 1333 aaPredicted RBP18.56■□□□□ 0.56
TMEM55B-207ENST00000557041 HSP90AB4PQ58FF6 505 aa18.55■□□□□ 0.56
TMEM55B-207ENST00000557041 PRPF40BQ6NWY9 871 aaKnown RBP18.55■□□□□ 0.56
TMEM55B-207ENST00000557041 XAGE3Q8WTP9 111 aa18.55■□□□□ 0.56
TMEM55B-207ENST00000557041 CASTP20810 708 aaKnown RBP18.54■□□□□ 0.56
TMEM55B-207ENST00000557041 STK3Q13188 491 aa18.54■□□□□ 0.56
TMEM55B-207ENST00000557041 CRB1P82279 1406 aa18.54■□□□□ 0.56
TMEM55B-207ENST00000557041 NASPP49321 788 aaPredicted RBP18.54■□□□□ 0.56
TMEM55B-207ENST00000557041 PPFIA3O75145 1194 aa18.54■□□□□ 0.56
TMEM55B-207ENST00000557041 JAKMIP1Q96N16 626 aaKnown RBP18.54■□□□□ 0.56
TMEM55B-207ENST00000557041 UBE3BQ7Z3V4 1068 aa18.53■□□□□ 0.56
TMEM55B-207ENST00000557041 GORABQ5T7V8 394 aa18.53■□□□□ 0.56
TMEM55B-207ENST00000557041 FIBPO43427 364 aa18.52■□□□□ 0.56
TMEM55B-207ENST00000557041 RUFY2Q8WXA3 655 aa18.52■□□□□ 0.56
TMEM55B-207ENST00000557041 SMC3Q9UQE7 1217 aa18.52■□□□□ 0.56
TMEM55B-207ENST00000557041 HSP90B1P14625 803 aaKnown RBP18.52■□□□□ 0.55
TMEM55B-207ENST00000557041 ZKSCAN1P17029 563 aaPredicted RBP18.52■□□□□ 0.55
TMEM55B-207ENST00000557041 USP31Q70CQ4 1352 aa18.51■□□□□ 0.55
TMEM55B-207ENST00000557041 HDAC5Q9UQL6 1122 aa18.51■□□□□ 0.55
TMEM55B-207ENST00000557041 SYCE3A1L190 88 aa18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 TAF7LQ5H9L4 462 aa18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 GAS2L3Q86XJ1 694 aa18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 BICC1Q9H694 974 aaKnown RBP18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 FAM177BA6PVY3 158 aa18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 KSR2Q6VAB6 950 aa18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 FERMT3Q86UX7 667 aa18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 CCDC83Q8IWF9 413 aa18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 EDC3Q96F86 508 aaKnown RBP18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 RAB11FIP3O75154 756 aa18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 CEP170BQ9Y4F5 1589 aaPredicted RBP18.5■□□□□ 0.55
TMEM55B-207ENST00000557041 TECPR2O15040 1411 aa18.49■□□□□ 0.55
TMEM55B-207ENST00000557041 GIGYF1O75420 1035 aaPredicted RBP18.49■□□□□ 0.55
TMEM55B-207ENST00000557041 GLRX3O76003 335 aaKnown RBP18.49■□□□□ 0.55
TMEM55B-207ENST00000557041 GRM8O00222 908 aa18.49■□□□□ 0.55
TMEM55B-207ENST00000557041 ARHGEF25Q86VW2 580 aa18.49■□□□□ 0.55
TMEM55B-207ENST00000557041 USP16Q9Y5T5 823 aa18.49■□□□□ 0.55
TMEM55B-207ENST00000557041 A0A087WZG4 1122 aa18.48■□□□□ 0.55
TMEM55B-207ENST00000557041 BEND3Q5T5X7 828 aa18.48■□□□□ 0.55
TMEM55B-207ENST00000557041 ZNF496Q96IT1 587 aaPredicted RBP18.48■□□□□ 0.55
TMEM55B-207ENST00000557041 C19orf44Q9H6X5 657 aa18.48■□□□□ 0.55
TMEM55B-207ENST00000557041 CWC22Q9HCG8 908 aaKnown RBP18.48■□□□□ 0.55
TMEM55B-207ENST00000557041 ATP10DQ9P241 1426 aa18.48■□□□□ 0.55
TMEM55B-207ENST00000557041 KIF20BQ96Q89 1820 aa18.48■□□□□ 0.55
TMEM55B-207ENST00000557041 PTMSP20962 102 aa18.48■□□□□ 0.55
TMEM55B-207ENST00000557041 ECHDC1Q9NTX5 307 aa18.48■□□□□ 0.55
TMEM55B-207ENST00000557041 GOLGA6L4A6NEF3 574 aa18.48■□□□□ 0.55
TMEM55B-207ENST00000557041 MSNP26038 577 aaKnown RBP18.48■□□□□ 0.55
TMEM55B-207ENST00000557041 NECAB1Q8N987 351 aa18.47■□□□□ 0.55
TMEM55B-207ENST00000557041 SUCLG2Q96I99 432 aa18.47■□□□□ 0.55
TMEM55B-207ENST00000557041 HYPKQ9NX55 129 aa18.47■□□□□ 0.55
TMEM55B-207ENST00000557041 ZNF790Q6PG37 636 aa18.47■□□□□ 0.55
TMEM55B-207ENST00000557041 ANKRD13DQ6ZTN6 518 aa18.46■□□□□ 0.55
TMEM55B-207ENST00000557041 SSH3Q8TE77 659 aa18.46■□□□□ 0.55
TMEM55B-207ENST00000557041 LARP1Q6PKG0 1096 aaKnown RBP18.46■□□□□ 0.55
TMEM55B-207ENST00000557041 IL25Q9H293 177 aa18.46■□□□□ 0.55
TMEM55B-207ENST00000557041 IFNL2Q8IZJ0 200 aa18.45■□□□□ 0.54
TMEM55B-207ENST00000557041 FAM227BQ96M60 508 aa18.44■□□□□ 0.54
TMEM55B-207ENST00000557041 RRAGDQ9NQL2 400 aaPredicted RBP18.44■□□□□ 0.54
TMEM55B-207ENST00000557041 KIF24Q5T7B8 1368 aa18.44■□□□□ 0.54
TMEM55B-207ENST00000557041 IBTKQ9P2D0 1353 aaPredicted RBP18.44■□□□□ 0.54
TMEM55B-207ENST00000557041 KDM4AO75164 1064 aa18.44■□□□□ 0.54
TMEM55B-207ENST00000557041 DNTTIP2Q5QJE6 756 aaKnown RBP18.44■□□□□ 0.54
TMEM55B-207ENST00000557041 ARID3AQ99856 593 aa18.44■□□□□ 0.54
TMEM55B-207ENST00000557041 LINS1Q8NG48 757 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms