RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 RNF181Q9P0P0 153 aa21.47■■□□□ 1.03
RCCD1-207ENST00000556774 COL15A1P39059 1388 aa21.47■■□□□ 1.03
RCCD1-207ENST00000556774 RNMTO43148 476 aaKnown RBP21.46■■□□□ 1.03
RCCD1-207ENST00000556774 ZPR1O75312 459 aa21.46■■□□□ 1.03
RCCD1-207ENST00000556774 TM4SF1P30408 202 aa21.46■■□□□ 1.03
RCCD1-207ENST00000556774 CYP19A1P11511 503 aaPredicted RBP21.45■■□□□ 1.02
RCCD1-207ENST00000556774 ZBTB1Q9Y2K1 713 aa21.44■■□□□ 1.02
RCCD1-207ENST00000556774 C16orf71Q8IYS4 520 aaPredicted RBP21.43■■□□□ 1.02
RCCD1-207ENST00000556774 RBM46Q8TBY0 533 aaKnown RBP21.43■■□□□ 1.02
RCCD1-207ENST00000556774 TIAM2Q8IVF5 1701 aa21.43■■□□□ 1.02
RCCD1-207ENST00000556774 NFIXQ14938 502 aa21.42■■□□□ 1.02
RCCD1-207ENST00000556774 KIF7Q2M1P5 1343 aa21.42■■□□□ 1.02
RCCD1-207ENST00000556774 KDM2BQ8NHM5 1336 aa21.42■■□□□ 1.02
RCCD1-207ENST00000556774 CCER1Q8TC90 406 aaPredicted RBP21.42■■□□□ 1.02
RCCD1-207ENST00000556774 CCDC88AQ3V6T2 1871 aa21.41■■□□□ 1.02
RCCD1-207ENST00000556774 RASSF7Q02833 373 aa21.41■■□□□ 1.02
RCCD1-207ENST00000556774 MTHFSDQ2M296 383 aaKnown RBP21.41■■□□□ 1.02
RCCD1-207ENST00000556774 DNAJC5GQ8N7S2 189 aa21.41■■□□□ 1.02
RCCD1-207ENST00000556774 NARFQ9UHQ1 456 aa21.41■■□□□ 1.02
RCCD1-207ENST00000556774 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
RCCD1-207ENST00000556774 BCL2L12Q9HB09 334 aa21.4■■□□□ 1.02
RCCD1-207ENST00000556774 SIPA1L3O60292 1781 aaPredicted RBP21.4■■□□□ 1.02
RCCD1-207ENST00000556774 CARMIL3Q8ND23 1372 aa21.39■■□□□ 1.02
RCCD1-207ENST00000556774 HTRA3P83110 453 aa21.39■■□□□ 1.01
RCCD1-207ENST00000556774 ANKRD31Q8N7Z5 1873 aa21.39■■□□□ 1.01
RCCD1-207ENST00000556774 COL3A1P02461 1466 aaPredicted RBP21.39■■□□□ 1.01
RCCD1-207ENST00000556774 RRAGCQ9HB90 399 aa21.38■■□□□ 1.01
RCCD1-207ENST00000556774 DIAPH1O60610 1272 aaKnown RBP21.37■■□□□ 1.01
RCCD1-207ENST00000556774 CC2D1BQ5T0F9 858 aaKnown RBP21.37■■□□□ 1.01
RCCD1-207ENST00000556774 COL11A2P13942 1736 aaPredicted RBP21.37■■□□□ 1.01
RCCD1-207ENST00000556774 SERPINB2P05120 415 aa21.36■■□□□ 1.01
RCCD1-207ENST00000556774 CANXP27824 592 aaKnown RBP21.36■■□□□ 1.01
RCCD1-207ENST00000556774 FSTL1Q12841 308 aa21.36■■□□□ 1.01
RCCD1-207ENST00000556774 VSIG10Q8N0Z9 540 aa21.36■■□□□ 1.01
RCCD1-207ENST00000556774 PRELPP51888 382 aa21.34■■□□□ 1.01
RCCD1-207ENST00000556774 BICDL1Q6ZP65 573 aa21.34■■□□□ 1.01
RCCD1-207ENST00000556774 TTC5Q8N0Z6 440 aa21.34■■□□□ 1.01
RCCD1-207ENST00000556774 PER1O15534 1290 aaPredicted RBP21.33■■□□□ 1.01
RCCD1-207ENST00000556774 C2CD5Q86YS7 1000 aa21.33■■□□□ 1.01
RCCD1-207ENST00000556774 CACNA1SQ13698 1873 aa21.32■■□□□ 1
RCCD1-207ENST00000556774 ZC3H4Q9UPT8 1303 aaKnown RBP21.32■■□□□ 1
RCCD1-207ENST00000556774 LMNB1P20700 586 aa21.32■■□□□ 1
RCCD1-207ENST00000556774 TTLL6Q8N841 843 aa21.32■■□□□ 1
RCCD1-207ENST00000556774 KLRG1Q96E93 195 aa21.32■■□□□ 1
RCCD1-207ENST00000556774 EIF5P55010 431 aaKnown RBP21.31■■□□□ 1
RCCD1-207ENST00000556774 CNGB1Q14028 1251 aaPredicted RBP21.31■■□□□ 1
RCCD1-207ENST00000556774 BCORQ6W2J9 1755 aa21.31■■□□□ 1
RCCD1-207ENST00000556774 U2SURPO15042 1029 aaKnown RBP21.3■■□□□ 1
RCCD1-207ENST00000556774 STARD3NLO95772 234 aa21.3■■□□□ 1
RCCD1-207ENST00000556774 SMC1BQ8NDV3 1235 aa21.3■■□□□ 1
RCCD1-207ENST00000556774 ZNF496Q96IT1 587 aaPredicted RBP21.3■■□□□ 1
RCCD1-207ENST00000556774 ZNF330Q9Y3S2 320 aaPredicted RBP21.3■■□□□ 1
RCCD1-207ENST00000556774 HEG1Q9ULI3 1381 aa21.3■■□□□ 1
RCCD1-207ENST00000556774 FER1L6Q2WGJ9 1857 aa21.3■■□□□ 1
RCCD1-207ENST00000556774 DICER1Q9UPY3 1922 aaKnown RBP21.29■■□□□ 1
RCCD1-207ENST00000556774 A0A087WZG4 1122 aa21.29■■□□□ 1
RCCD1-207ENST00000556774 H0YIN7 160 aa21.29■■□□□ 1
RCCD1-207ENST00000556774 NFKBIEO00221 500 aa21.29■■□□□ 1
RCCD1-207ENST00000556774 TEFQ10587 303 aa21.29■■□□□ 1
RCCD1-207ENST00000556774 TBC1D9BQ66K14 1250 aa21.29■■□□□ 1
RCCD1-207ENST00000556774 PCNTO95613 3336 aa21.28■■□□□ 1
RCCD1-207ENST00000556774 IL17REQ8NFR9 667 aa21.28■■□□□ 1
RCCD1-207ENST00000556774 GLTPD2A6NH11 291 aa21.27■■□□□ 1
RCCD1-207ENST00000556774 GNAT3A8MTJ3 354 aa21.27■■□□□ 1
RCCD1-207ENST00000556774 ZNF790Q6PG37 636 aa21.27■■□□□ 1
RCCD1-207ENST00000556774 CCDC24Q8N4L8 307 aa21.27■■□□□ 1
RCCD1-207ENST00000556774 GAS2L2Q8NHY3 880 aa21.27■■□□□ 1
RCCD1-207ENST00000556774 JMYQ8N9B5 988 aa21.26■□□□□ 0.99
RCCD1-207ENST00000556774 TBC1D2BQ9UPU7 963 aa21.26■□□□□ 0.99
RCCD1-207ENST00000556774 ARFGEF2Q9Y6D5 1785 aa21.25■□□□□ 0.99
RCCD1-207ENST00000556774 NPC1L1Q9UHC9 1359 aa21.25■□□□□ 0.99
RCCD1-207ENST00000556774 ZNF622Q969S3 477 aaKnown RBP eCLIP21.25■□□□□ 0.998e-9■□□□□ 11
RCCD1-207ENST00000556774 ZNF219Q9P2Y4 722 aaPredicted RBP21.25■□□□□ 0.99
RCCD1-207ENST00000556774 VEGFAP15692 232 aaPredicted RBP21.24■□□□□ 0.99
RCCD1-207ENST00000556774 PRR5LQ6MZQ0 368 aa21.24■□□□□ 0.99
RCCD1-207ENST00000556774 SLX4Q8IY92 1834 aa21.24■□□□□ 0.99
RCCD1-207ENST00000556774 CEMIPQ8WUJ3 1361 aa21.23■□□□□ 0.99
RCCD1-207ENST00000556774 FMNL2Q96PY5 1086 aa21.23■□□□□ 0.99
RCCD1-207ENST00000556774 TEX13AQ9BXU3 409 aaPredicted RBP21.23■□□□□ 0.99
RCCD1-207ENST00000556774 C21orf2O43822 256 aa21.22■□□□□ 0.99
RCCD1-207ENST00000556774 A1BGP04217 495 aa21.22■□□□□ 0.99
RCCD1-207ENST00000556774 PDE6BP35913 854 aa21.22■□□□□ 0.99
RCCD1-207ENST00000556774 IL6STP40189 918 aaPredicted RBP21.22■□□□□ 0.99
RCCD1-207ENST00000556774 BRIP1Q9BX63 1249 aa21.22■□□□□ 0.99
RCCD1-207ENST00000556774 KCNQ3O43525 872 aa21.21■□□□□ 0.99
RCCD1-207ENST00000556774 CAMTA2O94983 1202 aa21.2■□□□□ 0.98
RCCD1-207ENST00000556774 CNBD1Q8NA66 436 aa21.2■□□□□ 0.98
RCCD1-207ENST00000556774 PRKAR2BP31323 418 aa21.19■□□□□ 0.98
RCCD1-207ENST00000556774 PIP4K2AP48426 406 aaPredicted RBP21.19■□□□□ 0.98
RCCD1-207ENST00000556774 COL13A1Q5TAT6 717 aaPredicted RBP21.19■□□□□ 0.98
RCCD1-207ENST00000556774 PHACTR3Q96KR7 559 aa21.19■□□□□ 0.98
RCCD1-207ENST00000556774 PDZRN3Q9UPQ7 1066 aa21.19■□□□□ 0.98
RCCD1-207ENST00000556774 BTBD11A6QL63 1104 aa21.18■□□□□ 0.98
RCCD1-207ENST00000556774 POTECB2RU33 542 aa21.18■□□□□ 0.98
RCCD1-207ENST00000556774 NPHP1O15259 732 aa21.18■□□□□ 0.98
RCCD1-207ENST00000556774 ERFEQ4G0M1 354 aa21.18■□□□□ 0.98
RCCD1-207ENST00000556774 NPM2Q86SE8 214 aaKnown RBP21.18■□□□□ 0.98
RCCD1-207ENST00000556774 SETDB2Q96T68 719 aa21.18■□□□□ 0.98
RCCD1-207ENST00000556774 RSPH6AQ9H0K4 717 aa21.18■□□□□ 0.98
RCCD1-207ENST00000556774 DZIP3Q86Y13 1208 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms