RNA–Protein interactions for RNA: ENST00000556647.1

SRSF5-216, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-216ENST00000556647 VIRMAQ69YN4 1812 aaKnown RBP13.82□□□□□ -0.2
SRSF5-216ENST00000556647 TMEM88BA6NKF7 163 aa13.81□□□□□ -0.2
SRSF5-216ENST00000556647 MAP2K1Q02750 393 aaPredicted RBP13.81□□□□□ -0.2
SRSF5-216ENST00000556647 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
SRSF5-216ENST00000556647 CD163L1Q9NR16 1453 aa13.8□□□□□ -0.2
SRSF5-216ENST00000556647 TMOD3Q9NYL9 352 aa13.8□□□□□ -0.2
SRSF5-216ENST00000556647 TIAM2Q8IVF5 1701 aa13.8□□□□□ -0.2
SRSF5-216ENST00000556647 RAB3GAP2Q9H2M9 1393 aa13.8□□□□□ -0.2
SRSF5-216ENST00000556647 SLC12A5Q9H2X9 1139 aa13.79□□□□□ -0.2
SRSF5-216ENST00000556647 PASKQ96RG2 1323 aa13.79□□□□□ -0.2
SRSF5-216ENST00000556647 EDC4Q6P2E9 1401 aaKnown RBP13.79□□□□□ -0.2
SRSF5-216ENST00000556647 DEFB115Q30KQ5 88 aa13.78□□□□□ -0.2
SRSF5-216ENST00000556647 COG3Q96JB2 828 aa13.78□□□□□ -0.2
SRSF5-216ENST00000556647 RPS6KA4O75676 772 aa13.77□□□□□ -0.21
SRSF5-216ENST00000556647 DDR1Q08345 913 aa13.77□□□□□ -0.21
SRSF5-216ENST00000556647 VSIG10Q8N0Z9 540 aa13.77□□□□□ -0.21
SRSF5-216ENST00000556647 SMG6Q86US8 1419 aaKnown RBP13.76□□□□□ -0.21
SRSF5-216ENST00000556647 WDR33Q9C0J8 1336 aaKnown RBP13.76□□□□□ -0.21
SRSF5-216ENST00000556647 NUBP1P53384 320 aa13.76□□□□□ -0.21
SRSF5-216ENST00000556647 RRS1Q15050 365 aaKnown RBP13.76□□□□□ -0.21
SRSF5-216ENST00000556647 ERFEQ4G0M1 354 aa13.76□□□□□ -0.21
SRSF5-216ENST00000556647 BEGAINQ9BUH8 593 aa13.76□□□□□ -0.21
SRSF5-216ENST00000556647 ATG3Q9NT62 314 aa13.76□□□□□ -0.21
SRSF5-216ENST00000556647 SRP68Q9UHB9 627 aaKnown RBP13.76□□□□□ -0.21
SRSF5-216ENST00000556647 NFKBIEO00221 500 aa13.75□□□□□ -0.21
SRSF5-216ENST00000556647 DDNO94850 711 aaPredicted RBP13.75□□□□□ -0.21
SRSF5-216ENST00000556647 NKX1-1Q15270 411 aaPredicted RBP13.75□□□□□ -0.21
SRSF5-216ENST00000556647 RC3H1Q5TC82 1133 aaKnown RBP13.75□□□□□ -0.21
SRSF5-216ENST00000556647 TERF2IPQ9NYB0 399 aa13.75□□□□□ -0.21
SRSF5-216ENST00000556647 PAXIP1Q6ZW49 1069 aaPredicted RBP13.74□□□□□ -0.21
SRSF5-216ENST00000556647 LDHDQ86WU2 507 aa13.74□□□□□ -0.21
SRSF5-216ENST00000556647 TTLL6Q8N841 843 aa13.74□□□□□ -0.21
SRSF5-216ENST00000556647 MCOLN1Q9GZU1 580 aa13.74□□□□□ -0.21
SRSF5-216ENST00000556647 PDE4DIPQ5VU43 2346 aa13.73□□□□□ -0.21
SRSF5-216ENST00000556647 RASSF10A6NK89 507 aa13.73□□□□□ -0.21
SRSF5-216ENST00000556647 ITGBL1O95965 494 aaPredicted RBP13.73□□□□□ -0.21
SRSF5-216ENST00000556647 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
SRSF5-216ENST00000556647 TSKSQ9UJT2 592 aa13.73□□□□□ -0.21
SRSF5-216ENST00000556647 ABT1Q9ULW3 272 aaKnown RBP13.73□□□□□ -0.21
SRSF5-216ENST00000556647 A0A1W2PP64 1363 aa13.72□□□□□ -0.21
SRSF5-216ENST00000556647 CNTNAP4Q9C0A0 1308 aa13.72□□□□□ -0.21
SRSF5-216ENST00000556647 POLRMTO00411 1230 aaKnown RBP13.72□□□□□ -0.21
SRSF5-216ENST00000556647 EAPPQ56P03 285 aaPredicted RBP13.72□□□□□ -0.21
SRSF5-216ENST00000556647 SPG7Q9UQ90 795 aa13.72□□□□□ -0.21
SRSF5-216ENST00000556647 RTL1A6NKG5 1358 aa13.71□□□□□ -0.21
SRSF5-216ENST00000556647 GRM1Q13255 1194 aa13.71□□□□□ -0.21
SRSF5-216ENST00000556647 HSP90AB2PQ58FF8 381 aa13.71□□□□□ -0.21
SRSF5-216ENST00000556647 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.21
SRSF5-216ENST00000556647 USP42Q9H9J4 1324 aaKnown RBP13.7□□□□□ -0.22
SRSF5-216ENST00000556647 IQCA1LA6NCM1 817 aa13.7□□□□□ -0.22
SRSF5-216ENST00000556647 SPRYD3Q8NCJ5 442 aa13.7□□□□□ -0.22
SRSF5-216ENST00000556647 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
SRSF5-216ENST00000556647 KDRP35968 1356 aa13.7□□□□□ -0.22
SRSF5-216ENST00000556647 TM4SF1P30408 202 aa13.69□□□□□ -0.22
SRSF5-216ENST00000556647 PRPF38BQ5VTL8 546 aaKnown RBP13.69□□□□□ -0.22
SRSF5-216ENST00000556647 C2CD5Q86YS7 1000 aa13.69□□□□□ -0.22
SRSF5-216ENST00000556647 TAF1DQ9H5J8 278 aaPredicted RBP13.69□□□□□ -0.22
SRSF5-216ENST00000556647 TAOK2Q9UL54 1235 aa13.69□□□□□ -0.22
SRSF5-216ENST00000556647 MYH14Q7Z406 1995 aaKnown RBP13.69□□□□□ -0.22
SRSF5-216ENST00000556647 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
SRSF5-216ENST00000556647 DGKZQ13574 1117 aa13.68□□□□□ -0.22
SRSF5-216ENST00000556647 ROCK2O75116 1388 aaKnown RBP13.68□□□□□ -0.22
SRSF5-216ENST00000556647 TNRC18O15417 2968 aaPredicted RBP13.68□□□□□ -0.22
SRSF5-216ENST00000556647 CASP8AP2Q9UKL3 1982 aa13.67□□□□□ -0.22
SRSF5-216ENST00000556647 H0YIN7 160 aa13.67□□□□□ -0.22
SRSF5-216ENST00000556647 C21orf2O43822 256 aa13.67□□□□□ -0.22
SRSF5-216ENST00000556647 IFNL2Q8IZJ0 200 aa13.67□□□□□ -0.22
SRSF5-216ENST00000556647 CAPNS2Q96L46 248 aa13.67□□□□□ -0.22
SRSF5-216ENST00000556647 GPR101Q96P66 508 aaPredicted RBP13.67□□□□□ -0.22
SRSF5-216ENST00000556647 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
SRSF5-216ENST00000556647 CRKLP46109 303 aaKnown RBP13.66□□□□□ -0.22
SRSF5-216ENST00000556647 SOX10P56693 466 aa13.66□□□□□ -0.22
SRSF5-216ENST00000556647 MAP1SQ66K74 1059 aaPredicted RBP13.66□□□□□ -0.22
SRSF5-216ENST00000556647 CNTROBQ8N137 903 aa13.66□□□□□ -0.22
SRSF5-216ENST00000556647 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.22
SRSF5-216ENST00000556647 INSRP06213 1382 aa13.66□□□□□ -0.22
SRSF5-216ENST00000556647 ZPR1O75312 459 aa13.65□□□□□ -0.22
SRSF5-216ENST00000556647 PHKG2P15735 406 aa13.65□□□□□ -0.22
SRSF5-216ENST00000556647 ECE1P42892 770 aa13.65□□□□□ -0.22
SRSF5-216ENST00000556647 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
SRSF5-216ENST00000556647 USPL1Q5W0Q7 1092 aa13.65□□□□□ -0.22
SRSF5-216ENST00000556647 CYP4F22Q6NT55 531 aa13.65□□□□□ -0.22
SRSF5-216ENST00000556647 HS6ST3Q8IZP7 471 aa13.65□□□□□ -0.22
SRSF5-216ENST00000556647 DLEC1Q9Y238 1755 aa13.64□□□□□ -0.23
SRSF5-216ENST00000556647 PTCD1O75127 700 aaKnown RBP13.64□□□□□ -0.23
SRSF5-216ENST00000556647 SCN4AP35499 1836 aa13.64□□□□□ -0.23
SRSF5-216ENST00000556647 AFDNP55196 1824 aaKnown RBP13.64□□□□□ -0.23
SRSF5-216ENST00000556647 SERPINB2P05120 415 aa13.63□□□□□ -0.23
SRSF5-216ENST00000556647 NFIXQ14938 502 aa13.63□□□□□ -0.23
SRSF5-216ENST00000556647 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
SRSF5-216ENST00000556647 TAOK3Q9H2K8 898 aa13.63□□□□□ -0.23
SRSF5-216ENST00000556647 GGNBP2Q9H3C7 697 aa13.63□□□□□ -0.23
SRSF5-216ENST00000556647 HACL1Q9UJ83 578 aa13.63□□□□□ -0.23
SRSF5-216ENST00000556647 ZNF831Q5JPB2 1677 aa13.63□□□□□ -0.23
SRSF5-216ENST00000556647 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
SRSF5-216ENST00000556647 EPHX2P34913 555 aa13.62□□□□□ -0.23
SRSF5-216ENST00000556647 L3MBTL2Q969R5 705 aa13.62□□□□□ -0.23
SRSF5-216ENST00000556647 FER1L6Q2WGJ9 1857 aa13.61□□□□□ -0.23
SRSF5-216ENST00000556647 FLT4P35916 1363 aa13.61□□□□□ -0.23
SRSF5-216ENST00000556647 AOC2O75106 756 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms