RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 H3BM21 787 aa7.57□□□□□ -1.2
ATXN3-239ENST00000556315 PPP1R15AO75807 674 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-239ENST00000556315 GRM5P41594 1212 aa7.57□□□□□ -1.2
ATXN3-239ENST00000556315 RBM6P78332 1123 aaKnown RBP7.57□□□□□ -1.2
ATXN3-239ENST00000556315 NR5A1Q13285 461 aa7.57□□□□□ -1.2
ATXN3-239ENST00000556315 BPHLQ86WA6 291 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-239ENST00000556315 QTRT2Q9H974 415 aaKnown RBP7.57□□□□□ -1.2
ATXN3-239ENST00000556315 MYOM3Q5VTT5 1437 aa7.57□□□□□ -1.2
ATXN3-239ENST00000556315 KIF15Q9NS87 1388 aa7.57□□□□□ -1.2
ATXN3-239ENST00000556315 MAP3K1Q13233 1512 aa7.57□□□□□ -1.2
ATXN3-239ENST00000556315 UBR1Q8IWV7 1749 aa7.56□□□□□ -1.2
ATXN3-239ENST00000556315 SCARF1Q14162 830 aa7.56□□□□□ -1.2
ATXN3-239ENST00000556315 NUTM2DQ5VT03 806 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-239ENST00000556315 SH3RF1Q7Z6J0 888 aa7.56□□□□□ -1.2
ATXN3-239ENST00000556315 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATXN3-239ENST00000556315 ARMC2Q8NEN0 867 aa7.56□□□□□ -1.2
ATXN3-239ENST00000556315 IRF7Q92985 503 aa7.56□□□□□ -1.2
ATXN3-239ENST00000556315 C1QTNF2Q9BXJ5 285 aa7.56□□□□□ -1.2
ATXN3-239ENST00000556315 TET3O43151 1660 aa7.56□□□□□ -1.2
ATXN3-239ENST00000556315 ROBO1Q9Y6N7 1651 aa7.56□□□□□ -1.2
ATXN3-239ENST00000556315 DUOX2Q9NRD8 1548 aa7.56□□□□□ -1.2
ATXN3-239ENST00000556315 CDK12Q9NYV4 1490 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-239ENST00000556315 AFF2P51816 1311 aa7.55□□□□□ -1.2
ATXN3-239ENST00000556315 NR3C2P08235 984 aa7.55□□□□□ -1.2
ATXN3-239ENST00000556315 GMPRP36959 345 aa7.55□□□□□ -1.2
ATXN3-239ENST00000556315 ARID5BQ14865 1188 aa7.55□□□□□ -1.2
ATXN3-239ENST00000556315 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-239ENST00000556315 KANK4Q5T7N3 995 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-239ENST00000556315 IL27Q8NEV9 243 aa7.55□□□□□ -1.2
ATXN3-239ENST00000556315 LRRC59Q96AG4 307 aaKnown RBP7.55□□□□□ -1.2
ATXN3-239ENST00000556315 ITPKCQ96DU7 683 aa7.55□□□□□ -1.2
ATXN3-239ENST00000556315 PURBQ96QR8 312 aaKnown RBP7.55□□□□□ -1.2
ATXN3-239ENST00000556315 FAM117AQ9C073 453 aa7.55□□□□□ -1.2
ATXN3-239ENST00000556315 EFCAB6Q5THR3 1501 aa7.55□□□□□ -1.2
ATXN3-239ENST00000556315 LRP6O75581 1613 aa7.55□□□□□ -1.2
ATXN3-239ENST00000556315 PLEKHG1Q9ULL1 1385 aa7.55□□□□□ -1.2
ATXN3-239ENST00000556315 MAST1Q9Y2H9 1570 aa7.54□□□□□ -1.2
ATXN3-239ENST00000556315 ERBINQ96RT1 1412 aa7.54□□□□□ -1.2
ATXN3-239ENST00000556315 ZIC2O95409 532 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-239ENST00000556315 LORP23490 312 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-239ENST00000556315 CLK2P49760 499 aaKnown RBP7.54□□□□□ -1.2
ATXN3-239ENST00000556315 AGERQ15109 404 aa7.54□□□□□ -1.2
ATXN3-239ENST00000556315 BRINP3Q76B58 766 aa7.54□□□□□ -1.2
ATXN3-239ENST00000556315 SH3BP5LQ7L8J4 393 aa7.54□□□□□ -1.2
ATXN3-239ENST00000556315 TSC1Q92574 1164 aa7.54□□□□□ -1.2
ATXN3-239ENST00000556315 NGLY1Q96IV0 654 aa7.54□□□□□ -1.2
ATXN3-239ENST00000556315 ZFAND3Q9H8U3 227 aa7.54□□□□□ -1.2
ATXN3-239ENST00000556315 NOS1P29475 1434 aa7.53□□□□□ -1.2
ATXN3-239ENST00000556315 MROH1Q8NDA8 1641 aa7.53□□□□□ -1.2
ATXN3-239ENST00000556315 EIF2AK4Q9P2K8 1649 aaKnown RBP7.53□□□□□ -1.2
ATXN3-239ENST00000556315 VEGFBP49765 207 aa7.53□□□□□ -1.2
ATXN3-239ENST00000556315 TRMT44Q8IYL2 757 aaKnown RBP7.53□□□□□ -1.2
ATXN3-239ENST00000556315 HELBQ8NG08 1087 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-239ENST00000556315 RSPH6AQ9H0K4 717 aa7.53□□□□□ -1.2
ATXN3-239ENST00000556315 AMOTL2Q9Y2J4 779 aa7.53□□□□□ -1.2
ATXN3-239ENST00000556315 MAP4K5Q9Y4K4 846 aa7.53□□□□□ -1.2
ATXN3-239ENST00000556315 ERBB4Q15303 1308 aa7.52□□□□□ -1.2
ATXN3-239ENST00000556315 ABCC5O15440 1437 aa7.52□□□□□ -1.2
ATXN3-239ENST00000556315 XIRP1Q702N8 1843 aaKnown RBP7.52□□□□□ -1.2
ATXN3-239ENST00000556315 PIK3R4Q99570 1358 aa7.52□□□□□ -1.21
ATXN3-239ENST00000556315 NBPF14Q5TI25 921 aa7.52□□□□□ -1.21
ATXN3-239ENST00000556315 C8orf37Q96NL8 207 aa7.52□□□□□ -1.21
ATXN3-239ENST00000556315 CHIC2Q9UKJ5 165 aa7.52□□□□□ -1.21
ATXN3-239ENST00000556315 RIMS2Q9UQ26 1411 aa7.52□□□□□ -1.21
ATXN3-239ENST00000556315 ANKRD30AQ9BXX3 1397 aa7.51□□□□□ -1.21
ATXN3-239ENST00000556315 CCDC125Q86Z20 511 aa7.51□□□□□ -1.21
ATXN3-239ENST00000556315 GPKOWQ92917 476 aaPredicted RBP eCLIP7.51□□□□□ -1.21
ATXN3-239ENST00000556315 PIK3C2BO00750 1634 aa7.51□□□□□ -1.21
ATXN3-239ENST00000556315 LMTK2Q8IWU2 1503 aa7.51□□□□□ -1.21
ATXN3-239ENST00000556315 NWD1Q149M9 1564 aa7.5□□□□□ -1.21
ATXN3-239ENST00000556315 SETD1AO15047 1707 aaKnown RBP7.5□□□□□ -1.21
ATXN3-239ENST00000556315 PHLPP1O60346 1717 aa7.5□□□□□ -1.21
ATXN3-239ENST00000556315 COL16A1Q07092 1604 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-239ENST00000556315 SOBPA7XYQ1 873 aa7.5□□□□□ -1.21
ATXN3-239ENST00000556315 VSIG8P0DPA2 414 aa7.5□□□□□ -1.21
ATXN3-239ENST00000556315 MEIOBQ8N635 442 aa7.5□□□□□ -1.21
ATXN3-239ENST00000556315 ZFYVE9O95405 1425 aa7.5□□□□□ -1.21
ATXN3-239ENST00000556315 SETD5Q9C0A6 1442 aa7.5□□□□□ -1.21
ATXN3-239ENST00000556315 ATAD2Q6PL18 1390 aa7.49□□□□□ -1.21
ATXN3-239ENST00000556315 ADAMTS2O95450 1211 aa7.49□□□□□ -1.21
ATXN3-239ENST00000556315 ZSCAN1Q8NBB4 408 aa7.49□□□□□ -1.21
ATXN3-239ENST00000556315 GOPCQ9HD26 462 aa7.49□□□□□ -1.21
ATXN3-239ENST00000556315 POLR3EQ9NVU0 708 aa7.49□□□□□ -1.21
ATXN3-239ENST00000556315 TRPC5Q9UL62 973 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-239ENST00000556315 RGS12O14924 1447 aa7.48□□□□□ -1.21
ATXN3-239ENST00000556315 FSHRP23945 695 aa7.48□□□□□ -1.21
ATXN3-239ENST00000556315 CTDSPL2Q05D32 466 aa7.48□□□□□ -1.21
ATXN3-239ENST00000556315 ADAMTS13Q76LX8 1427 aa7.48□□□□□ -1.21
ATXN3-239ENST00000556315 VASH1Q7L8A9 365 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-239ENST00000556315 LINC00528Q8N1L1 170 aa7.48□□□□□ -1.21
ATXN3-239ENST00000556315 FNBP4Q8N3X1 1017 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-239ENST00000556315 USP21Q9UK80 565 aa7.48□□□□□ -1.21
ATXN3-239ENST00000556315 AHDC1Q5TGY3 1603 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-239ENST00000556315 KDM5AP29375 1690 aaKnown RBP7.47□□□□□ -1.21
ATXN3-239ENST00000556315 ADGRB3O60242 1522 aa7.47□□□□□ -1.21
ATXN3-239ENST00000556315 CFAP65Q6ZU64 1925 aaKnown RBP7.47□□□□□ -1.21
ATXN3-239ENST00000556315 DAPK1P53355 1430 aa7.47□□□□□ -1.21
ATXN3-239ENST00000556315 FAM181BA6NEQ2 426 aa7.47□□□□□ -1.21
ATXN3-239ENST00000556315 C6orf118Q5T5N4 469 aa7.47□□□□□ -1.21
ATXN3-239ENST00000556315 EMILIN1Q9Y6C2 1016 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms