RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 TSGA10IPQ3SY00 556 aa9.33□□□□□ -0.92
SNX6-204ENST00000555541 LCE3BQ5TA77 95 aa9.33□□□□□ -0.92
SNX6-204ENST00000555541 NLRP8Q86W28 1048 aa9.33□□□□□ -0.92
SNX6-204ENST00000555541 MDFIQ99750 246 aa9.33□□□□□ -0.92
SNX6-204ENST00000555541 ADH6P28332 368 aa9.32□□□□□ -0.92
SNX6-204ENST00000555541 GATA4P43694 442 aa9.32□□□□□ -0.92
SNX6-204ENST00000555541 TNP2Q05952 138 aa9.32□□□□□ -0.92
SNX6-204ENST00000555541 FIGNL1Q6PIW4 674 aa9.32□□□□□ -0.92
SNX6-204ENST00000555541 PHTF2Q8N3S3 785 aa9.32□□□□□ -0.92
SNX6-204ENST00000555541 ESF1Q9H501 851 aaKnown RBP9.32□□□□□ -0.92
SNX6-204ENST00000555541 SNRKQ9NRH2 765 aa9.32□□□□□ -0.92
SNX6-204ENST00000555541 MYCP01106 439 aaPredicted RBP9.31□□□□□ -0.92
SNX6-204ENST00000555541 ESCO1Q5FWF5 840 aa9.31□□□□□ -0.92
SNX6-204ENST00000555541 MAPTP10636 758 aaKnown RBP9.3□□□□□ -0.92
SNX6-204ENST00000555541 C1orf216Q8TAB5 229 aa9.3□□□□□ -0.92
SNX6-204ENST00000555541 PLVAPQ9BX97 442 aa9.3□□□□□ -0.92
SNX6-204ENST00000555541 ATXN7O15265 892 aaPredicted RBP9.29□□□□□ -0.92
SNX6-204ENST00000555541 SPATA31C1P0DKV0 1188 aa9.29□□□□□ -0.92
SNX6-204ENST00000555541 SCNN1DP51172 638 aa9.29□□□□□ -0.92
SNX6-204ENST00000555541 CHIC2Q9UKJ5 165 aa9.29□□□□□ -0.92
SNX6-204ENST00000555541 ZNF330Q9Y3S2 320 aaPredicted RBP9.29□□□□□ -0.92
SNX6-204ENST00000555541 GTF2E1P29083 439 aaPredicted RBP9.28□□□□□ -0.92
SNX6-204ENST00000555541 PLA2G4AP47712 749 aa9.28□□□□□ -0.92
SNX6-204ENST00000555541 COL9A3Q14050 684 aaPredicted RBP9.28□□□□□ -0.92
SNX6-204ENST00000555541 TBC1D9Q6ZT07 1266 aa9.28□□□□□ -0.92
SNX6-204ENST00000555541 TPSG1Q9NRR2 321 aa9.28□□□□□ -0.92
SNX6-204ENST00000555541 CD33P20138 364 aa9.27□□□□□ -0.93
SNX6-204ENST00000555541 TLR1Q15399 786 aa9.27□□□□□ -0.93
SNX6-204ENST00000555541 ZNF468Q5VIY5 522 aaPredicted RBP9.26□□□□□ -0.93
SNX6-204ENST00000555541 NDUFB9Q9Y6M9 179 aa9.26□□□□□ -0.93
SNX6-204ENST00000555541 A0A1W2PNR3 127 aa9.25□□□□□ -0.93
SNX6-204ENST00000555541 DCDC2BA2VCK2 349 aa9.25□□□□□ -0.93
SNX6-204ENST00000555541 ARTNQ5T4W7 220 aa9.25□□□□□ -0.93
SNX6-204ENST00000555541 KRTAP9-9Q9BYP9 154 aa9.25□□□□□ -0.93
SNX6-204ENST00000555541 KRTAP9-4Q9BYQ2 154 aa9.25□□□□□ -0.93
SNX6-204ENST00000555541 EFSO43281 561 aa9.24□□□□□ -0.93
SNX6-204ENST00000555541 DYRK3O43781 588 aa9.24□□□□□ -0.93
SNX6-204ENST00000555541 FAM157BP0CG42 384 aa9.24□□□□□ -0.93
SNX6-204ENST00000555541 PCBP4P57723 403 aaKnown RBP9.24□□□□□ -0.93
SNX6-204ENST00000555541 STRN4Q9NRL3 753 aa9.24□□□□□ -0.93
SNX6-204ENST00000555541 INHAP05111 366 aa9.23□□□□□ -0.93
SNX6-204ENST00000555541 USP4Q13107 963 aa9.23□□□□□ -0.93
SNX6-204ENST00000555541 IQSEC3Q9UPP2 1182 aaPredicted RBP9.23□□□□□ -0.93
SNX6-204ENST00000555541 KRTAP19-1Q8IUB9 90 aa9.22□□□□□ -0.93
SNX6-204ENST00000555541 ZIC5Q96T25 663 aa9.22□□□□□ -0.93
SNX6-204ENST00000555541 SAMD5Q5TGI4 173 aa9.21□□□□□ -0.94
SNX6-204ENST00000555541 NIFKQ9BYG3 293 aaKnown RBP9.21□□□□□ -0.94
SNX6-204ENST00000555541 ELOA3CA0A087WX78 387 aaPredicted RBP9.2□□□□□ -0.94
SNX6-204ENST00000555541 ELOA3DA6NLF2 546 aaPredicted RBP9.2□□□□□ -0.94
SNX6-204ENST00000555541 KHNYNO15037 678 aaKnown RBP9.2□□□□□ -0.94
SNX6-204ENST00000555541 SMTNP53814 917 aa9.2□□□□□ -0.94
SNX6-204ENST00000555541 IRF5Q13568 498 aa9.2□□□□□ -0.94
SNX6-204ENST00000555541 ELOA3BQ3SY89 546 aa9.2□□□□□ -0.94
SNX6-204ENST00000555541 ELOA3Q8NG57 546 aa9.2□□□□□ -0.94
SNX6-204ENST00000555541 ZFP64Q9NPA5 681 aa9.2□□□□□ -0.94
SNX6-204ENST00000555541 DOLKQ9UPQ8 538 aa9.2□□□□□ -0.94
SNX6-204ENST00000555541 USP3Q9Y6I4 520 aa9.2□□□□□ -0.94
SNX6-204ENST00000555541 GDF10P55107 478 aa9.19□□□□□ -0.94
SNX6-204ENST00000555541 MTFR1Q15390 333 aa9.19□□□□□ -0.94
SNX6-204ENST00000555541 SLC4A9Q96Q91 983 aa9.19□□□□□ -0.94
SNX6-204ENST00000555541 ZDHHC3Q9NYG2 299 aa9.19□□□□□ -0.94
SNX6-204ENST00000555541 TBC1D2BQ9UPU7 963 aa9.19□□□□□ -0.94
SNX6-204ENST00000555541 PRDM6Q9NQX0 595 aa9.18□□□□□ -0.94
SNX6-204ENST00000555541 STARD13Q9Y3M8 1113 aa9.18□□□□□ -0.94
SNX6-204ENST00000555541 SCO2A0A1W2PP80 73 aa9.17□□□□□ -0.94
SNX6-204ENST00000555541 ADARB2-AS1A8MUL3 147 aa9.17□□□□□ -0.94
SNX6-204ENST00000555541 LAMC2Q13753 1193 aa9.17□□□□□ -0.94
SNX6-204ENST00000555541 PRSS36Q5K4E3 855 aa9.17□□□□□ -0.94
SNX6-204ENST00000555541 AIDAQ96BJ3 306 aa9.17□□□□□ -0.94
SNX6-204ENST00000555541 MARK1Q9P0L2 795 aa9.16□□□□□ -0.94
SNX6-204ENST00000555541 TMEM229AB2RXF0 380 aa9.15□□□□□ -0.94
SNX6-204ENST00000555541 CDK2AP1O14519 115 aa9.15□□□□□ -0.94
SNX6-204ENST00000555541 ARSJQ5FYB0 599 aaPredicted RBP9.15□□□□□ -0.94
SNX6-204ENST00000555541 C7orf43Q8WVR3 580 aa9.15□□□□□ -0.94
SNX6-204ENST00000555541 FAM229AH3BQW9 127 aa9.14□□□□□ -0.95
SNX6-204ENST00000555541 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
SNX6-204ENST00000555541 SYT9Q86SS6 491 aa9.14□□□□□ -0.95
SNX6-204ENST00000555541 PRR12Q9ULL5 1215 aa9.14□□□□□ -0.95
SNX6-204ENST00000555541 SPDYE3A6NKU9 549 aa9.13□□□□□ -0.95
SNX6-204ENST00000555541 SIN3BO75182 1162 aa9.13□□□□□ -0.95
SNX6-204ENST00000555541 NID1P14543 1247 aa9.13□□□□□ -0.95
SNX6-204ENST00000555541 NBPF1Q3BBV0 1214 aa9.13□□□□□ -0.95
SNX6-204ENST00000555541 PRRT3Q5FWE3 981 aa9.13□□□□□ -0.95
SNX6-204ENST00000555541 APBB1O00213 710 aa9.12□□□□□ -0.95
SNX6-204ENST00000555541 TNFRSF25Q93038 417 aa9.12□□□□□ -0.95
SNX6-204ENST00000555541 SIRT1Q96EB6 747 aa9.12□□□□□ -0.95
SNX6-204ENST00000555541 A6NJY4 79 aa9.11□□□□□ -0.95
SNX6-204ENST00000555541 M0R082 166 aa9.11□□□□□ -0.95
SNX6-204ENST00000555541 H2AFB1P0C5Y9 115 aa9.11□□□□□ -0.95
SNX6-204ENST00000555541 H2AFB2P0C5Z0 115 aa9.11□□□□□ -0.95
SNX6-204ENST00000555541 TATP17735 454 aaPredicted RBP9.11□□□□□ -0.95
SNX6-204ENST00000555541 SLFNL1Q499Z3 407 aa9.11□□□□□ -0.95
SNX6-204ENST00000555541 TPRNQ4KMQ1 711 aa9.11□□□□□ -0.95
SNX6-204ENST00000555541 C8orf86Q6ZUL3 223 aa9.11□□□□□ -0.95
SNX6-204ENST00000555541 MICALL1Q8N3F8 863 aa9.11□□□□□ -0.95
SNX6-204ENST00000555541 ZNF417Q8TAU3 575 aa9.11□□□□□ -0.95
SNX6-204ENST00000555541 ZNF587Q96SQ5 575 aaPredicted RBP9.11□□□□□ -0.95
SNX6-204ENST00000555541 KRTAP4-8A0A0G2JLE6 195 aa9.1□□□□□ -0.95
SNX6-204ENST00000555541 APBA3O96018 575 aa9.1□□□□□ -0.95
SNX6-204ENST00000555541 ALBP02768 609 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 436.2 ms