RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 GRPEL1Q9HAV7 217 aa29.24■■■□□ 2.27
STRN3-207ENST00000555358 PLEKHG2Q9H7P9 1386 aa29.24■■■□□ 2.27
STRN3-207ENST00000555358 PLEKHM2Q8IWE5 1019 aa29.23■■■□□ 2.27
STRN3-207ENST00000555358 DCTPP1Q9H773 170 aa29.23■■■□□ 2.27
STRN3-207ENST00000555358 BTG4Q9NY30 223 aa29.23■■■□□ 2.27
STRN3-207ENST00000555358 COL22A1Q8NFW1 1626 aaPredicted RBP29.23■■■□□ 2.27
STRN3-207ENST00000555358 PHLPP1O60346 1717 aa29.23■■■□□ 2.27
STRN3-207ENST00000555358 SLC52A2Q9HAB3 445 aa29.22■■■□□ 2.27
STRN3-207ENST00000555358 FLIIQ13045 1269 aa29.22■■■□□ 2.27
STRN3-207ENST00000555358 PIP4K2BP78356 416 aa29.21■■■□□ 2.27
STRN3-207ENST00000555358 NFATC2IPQ8NCF5 419 aa29.21■■■□□ 2.27
STRN3-207ENST00000555358 ATP10DQ9P241 1426 aa29.2■■■□□ 2.27
STRN3-207ENST00000555358 COL16A1Q07092 1604 aaPredicted RBP29.2■■■□□ 2.26
STRN3-207ENST00000555358 SLC39A6Q13433 755 aa29.2■■■□□ 2.26
STRN3-207ENST00000555358 ZCRB1Q8TBF4 217 aaKnown RBP29.19■■■□□ 2.26
STRN3-207ENST00000555358 DCAF5Q96JK2 942 aa29.19■■■□□ 2.26
STRN3-207ENST00000555358 FOXD4L1Q9NU39 408 aa29.19■■■□□ 2.26
STRN3-207ENST00000555358 PRAMEF22A3QJZ6 481 aa29.18■■■□□ 2.26
STRN3-207ENST00000555358 HOXB7P09629 217 aa29.18■■■□□ 2.26
STRN3-207ENST00000555358 IL2RBP14784 551 aa29.18■■■□□ 2.26
STRN3-207ENST00000555358 FKBP5Q13451 457 aaPredicted RBP29.18■■■□□ 2.26
STRN3-207ENST00000555358 SLC4A10Q6U841 1118 aa29.18■■■□□ 2.26
STRN3-207ENST00000555358 HSP90AA1P07900 732 aaKnown RBP29.18■■■□□ 2.26
STRN3-207ENST00000555358 PHAXQ9H814 394 aaKnown RBP29.18■■■□□ 2.26
STRN3-207ENST00000555358 HEG1Q9ULI3 1381 aa29.18■■■□□ 2.26
STRN3-207ENST00000555358 COL14A1Q05707 1796 aaKnown RBP29.18■■■□□ 2.26
STRN3-207ENST00000555358 SKOR2Q2VWA4 1001 aaPredicted RBP29.17■■■□□ 2.26
STRN3-207ENST00000555358 TTC22Q5TAA0 569 aa29.17■■■□□ 2.26
STRN3-207ENST00000555358 GIGYF1O75420 1035 aaPredicted RBP29.17■■■□□ 2.26
STRN3-207ENST00000555358 PTMSP20962 102 aa29.17■■■□□ 2.26
STRN3-207ENST00000555358 CHPF2Q9P2E5 772 aa29.17■■■□□ 2.26
STRN3-207ENST00000555358 SHANK3Q9BYB0 1731 aa29.16■■■□□ 2.26
STRN3-207ENST00000555358 ANKRD44Q8N8A2 993 aa29.16■■■□□ 2.26
STRN3-207ENST00000555358 TOM1O60784 492 aa29.15■■■□□ 2.26
STRN3-207ENST00000555358 EIF5BO60841 1220 aaKnown RBP29.15■■■□□ 2.26
STRN3-207ENST00000555358 ZNF790Q6PG37 636 aa29.15■■■□□ 2.26
STRN3-207ENST00000555358 MRC1P22897 1456 aa29.15■■■□□ 2.26
STRN3-207ENST00000555358 ANXA1P04083 346 aa29.14■■■□□ 2.26
STRN3-207ENST00000555358 CLEC17AQ6ZS10 378 aa29.14■■■□□ 2.26
STRN3-207ENST00000555358 GAS2L3Q86XJ1 694 aa29.14■■■□□ 2.26
STRN3-207ENST00000555358 PCDH11XQ9BZA7 1347 aa29.14■■■□□ 2.26
STRN3-207ENST00000555358 PCDH11YQ9BZA8 1340 aa29.14■■■□□ 2.26
STRN3-207ENST00000555358 CLCN1P35523 988 aa29.14■■■□□ 2.26
STRN3-207ENST00000555358 SSFA2P28290 1259 aa29.13■■■□□ 2.25
STRN3-207ENST00000555358 MEIS3Q99687 375 aa29.13■■■□□ 2.25
STRN3-207ENST00000555358 C16orf71Q8IYS4 520 aaPredicted RBP29.13■■■□□ 2.25
STRN3-207ENST00000555358 RABEP1Q15276 862 aa29.11■■■□□ 2.25
STRN3-207ENST00000555358 DDX54Q8TDD1 881 aaKnown RBP29.11■■■□□ 2.25
STRN3-207ENST00000555358 CEP85Q6P2H3 762 aa29.1■■■□□ 2.25
STRN3-207ENST00000555358 RPAP2Q8IXW5 612 aaPredicted RBP29.1■■■□□ 2.25
STRN3-207ENST00000555358 ADAMTS2O95450 1211 aa29.1■■■□□ 2.25
STRN3-207ENST00000555358 CCT4P50991 539 aaKnown RBP29.1■■■□□ 2.25
STRN3-207ENST00000555358 CABP4P57796 275 aa29.1■■■□□ 2.25
STRN3-207ENST00000555358 C5P01031 1676 aa29.1■■■□□ 2.25
STRN3-207ENST00000555358 USP26Q9BXU7 913 aa29.09■■■□□ 2.25
STRN3-207ENST00000555358 OTUD7AQ8TE49 926 aaPredicted RBP29.09■■■□□ 2.25
STRN3-207ENST00000555358 PRKCSHP14314 528 aaPredicted RBP29.08■■■□□ 2.25
STRN3-207ENST00000555358 PROSER3Q2NL68 480 aa29.08■■■□□ 2.25
STRN3-207ENST00000555358 ZNF496Q96IT1 587 aaPredicted RBP29.08■■■□□ 2.25
STRN3-207ENST00000555358 UBAP1LF5GYI3 381 aa29.07■■■□□ 2.24
STRN3-207ENST00000555358 CHMP4AQ9BY43 222 aa29.05■■■□□ 2.24
STRN3-207ENST00000555358 DBF4Q9UBU7 674 aaPredicted RBP29.05■■■□□ 2.24
STRN3-207ENST00000555358 N4BP2Q86UW6 1770 aaPredicted RBP29.05■■■□□ 2.24
STRN3-207ENST00000555358 PLCH1Q4KWH8 1693 aa29.05■■■□□ 2.24
STRN3-207ENST00000555358 NUTM2BA6NNL0 878 aaPredicted RBP29.05■■■□□ 2.24
STRN3-207ENST00000555358 NUTM2EB1AL46 878 aaPredicted RBP29.05■■■□□ 2.24
STRN3-207ENST00000555358 BAG4O95429 457 aaKnown RBP29.05■■■□□ 2.24
STRN3-207ENST00000555358 NUTM2AQ8IVF1 878 aaPredicted RBP29.05■■■□□ 2.24
STRN3-207ENST00000555358 AK9Q5TCS8 1911 aa29.04■■■□□ 2.24
STRN3-207ENST00000555358 SDSP20132 328 aa29.04■■■□□ 2.24
STRN3-207ENST00000555358 NKX1-1Q15270 411 aaPredicted RBP29.04■■■□□ 2.24
STRN3-207ENST00000555358 TTC5Q8N0Z6 440 aa29.04■■■□□ 2.24
STRN3-207ENST00000555358 SMARCA5O60264 1052 aaPredicted RBP29.01■■■□□ 2.24
STRN3-207ENST00000555358 PXDNLA1KZ92 1463 aa29.01■■■□□ 2.23
STRN3-207ENST00000555358 PI4KAP2A4QPH2 592 aa29.01■■■□□ 2.23
STRN3-207ENST00000555358 GOLGA6L22H0YM25 854 aa29.01■■■□□ 2.23
STRN3-207ENST00000555358 KLHL40Q2TBA0 621 aa29.01■■■□□ 2.23
STRN3-207ENST00000555358 PI4KAP1Q8N8J0 262 aa29.01■■■□□ 2.23
STRN3-207ENST00000555358 ERBB4Q15303 1308 aa29■■■□□ 2.23
STRN3-207ENST00000555358 IBTKQ9P2D0 1353 aaPredicted RBP29■■■□□ 2.23
STRN3-207ENST00000555358 CYP2E1P05181 493 aaPredicted RBP29■■■□□ 2.23
STRN3-207ENST00000555358 DISP2A7MBM2 1401 aa29■■■□□ 2.23
STRN3-207ENST00000555358 TOGARAM1Q9Y4F4 1720 aa29■■■□□ 2.23
STRN3-207ENST00000555358 ERVV-2B6SEH9 535 aa29■■■□□ 2.23
STRN3-207ENST00000555358 PDIA6Q15084 440 aa29■■■□□ 2.23
STRN3-207ENST00000555358 ADCY9O60503 1353 aa28.99■■■□□ 2.23
STRN3-207ENST00000555358 ESPNB1AK53 854 aa28.98■■■□□ 2.23
STRN3-207ENST00000555358 USP16Q9Y5T5 823 aa28.98■■■□□ 2.23
STRN3-207ENST00000555358 GLI3P10071 1580 aa28.98■■■□□ 2.23
STRN3-207ENST00000555358 FMNL2Q96PY5 1086 aa28.98■■■□□ 2.23
STRN3-207ENST00000555358 DNAAF4Q8WXU2 420 aa28.97■■■□□ 2.23
STRN3-207ENST00000555358 NRAPQ86VF7 1730 aa28.97■■■□□ 2.23
STRN3-207ENST00000555358 SNRPA1P09661 255 aaKnown RBP28.97■■■□□ 2.23
STRN3-207ENST00000555358 DDX21Q9NR30 783 aaKnown RBP eCLIP28.97■■■□□ 2.23
STRN3-207ENST00000555358 NUCB2P80303 420 aa28.96■■■□□ 2.23
STRN3-207ENST00000555358 APBB1O00213 710 aa28.95■■■□□ 2.22
STRN3-207ENST00000555358 CASC1Q6TDU7 716 aa28.95■■■□□ 2.22
STRN3-207ENST00000555358 USP44Q9H0E7 712 aa28.95■■■□□ 2.22
STRN3-207ENST00000555358 HYPKQ9NX55 129 aa28.95■■■□□ 2.22
STRN3-207ENST00000555358 DDX49Q9Y6V7 483 aaKnown RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms