RNA–Protein interactions for RNA: ENST00000555078.2

RAB42P1-201, Transcript of RAB42, member RAS oncogene family, pseudogene 1, humanhuman

BASIC

Gene RAB42P1, Length 316 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42P1-201ENST00000555078 DDR1Q08345 913 aa16.66■□□□□ 0.26
RAB42P1-201ENST00000555078 USPL1Q5W0Q7 1092 aa16.66■□□□□ 0.26
RAB42P1-201ENST00000555078 MCM10Q7L590 875 aa16.66■□□□□ 0.26
RAB42P1-201ENST00000555078 GOLGB1Q14789 3259 aaKnown RBP16.65■□□□□ 0.26
RAB42P1-201ENST00000555078 ZPR1O75312 459 aa16.65■□□□□ 0.26
RAB42P1-201ENST00000555078 CANXP27824 592 aaKnown RBP16.65■□□□□ 0.26
RAB42P1-201ENST00000555078 RTF1Q92541 710 aaKnown RBP16.65■□□□□ 0.26
RAB42P1-201ENST00000555078 STARD3NLO95772 234 aa16.64■□□□□ 0.25
RAB42P1-201ENST00000555078 TM4SF1P30408 202 aa16.64■□□□□ 0.25
RAB42P1-201ENST00000555078 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
RAB42P1-201ENST00000555078 DCTN1Q14203 1278 aa16.64■□□□□ 0.25
RAB42P1-201ENST00000555078 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
RAB42P1-201ENST00000555078 BCL2L12Q9HB09 334 aa16.64■□□□□ 0.25
RAB42P1-201ENST00000555078 NARFQ9UHQ1 456 aa16.64■□□□□ 0.25
RAB42P1-201ENST00000555078 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
RAB42P1-201ENST00000555078 POLRMTO00411 1230 aaKnown RBP16.63■□□□□ 0.25
RAB42P1-201ENST00000555078 HTATSF1O43719 755 aaKnown RBP16.63■□□□□ 0.25
RAB42P1-201ENST00000555078 PLEKHF1Q96S99 279 aa16.63■□□□□ 0.25
RAB42P1-201ENST00000555078 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
RAB42P1-201ENST00000555078 DPEP1P16444 411 aa16.62■□□□□ 0.25
RAB42P1-201ENST00000555078 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
RAB42P1-201ENST00000555078 RALBP1Q15311 655 aa16.62■□□□□ 0.25
RAB42P1-201ENST00000555078 DLG5Q8TDM6 1919 aa16.62■□□□□ 0.25
RAB42P1-201ENST00000555078 BRCA1P38398 1863 aaKnown RBP16.61■□□□□ 0.25
RAB42P1-201ENST00000555078 NRXN2Q9P2S2 1712 aa16.6■□□□□ 0.25
RAB42P1-201ENST00000555078 A1BGP04217 495 aa16.6■□□□□ 0.25
RAB42P1-201ENST00000555078 KCNA3P22001 575 aa16.6■□□□□ 0.25
RAB42P1-201ENST00000555078 NFIXQ14938 502 aa16.6■□□□□ 0.25
RAB42P1-201ENST00000555078 AFDNP55196 1824 aaKnown RBP16.6■□□□□ 0.25
RAB42P1-201ENST00000555078 SCN7AQ01118 1682 aa16.59■□□□□ 0.25
RAB42P1-201ENST00000555078 PRAMEF22A3QJZ6 481 aa16.59■□□□□ 0.25
RAB42P1-201ENST00000555078 NEFMP07197 916 aa16.59■□□□□ 0.25
RAB42P1-201ENST00000555078 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
RAB42P1-201ENST00000555078 USP16Q9Y5T5 823 aa16.59■□□□□ 0.25
RAB42P1-201ENST00000555078 A0A087WZG4 1122 aa16.58■□□□□ 0.24
RAB42P1-201ENST00000555078 IL6STP40189 918 aaPredicted RBP16.58■□□□□ 0.24
RAB42P1-201ENST00000555078 ZNF330Q9Y3S2 320 aaPredicted RBP16.58■□□□□ 0.24
RAB42P1-201ENST00000555078 ADCY9O60503 1353 aa16.58■□□□□ 0.24
RAB42P1-201ENST00000555078 TAF7Q15545 349 aaPredicted RBP16.57■□□□□ 0.24
RAB42P1-201ENST00000555078 NFE2L2Q16236 605 aa16.57■□□□□ 0.24
RAB42P1-201ENST00000555078 ATP10DQ9P241 1426 aa16.56■□□□□ 0.24
RAB42P1-201ENST00000555078 MYBBP1AQ9BQG0 1328 aaKnown RBP16.56■□□□□ 0.24
RAB42P1-201ENST00000555078 SERPINB2P05120 415 aa16.56■□□□□ 0.24
RAB42P1-201ENST00000555078 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
RAB42P1-201ENST00000555078 PIP4K2AP48426 406 aaPredicted RBP16.56■□□□□ 0.24
RAB42P1-201ENST00000555078 PNNQ9H307 717 aaKnown RBP16.56■□□□□ 0.24
RAB42P1-201ENST00000555078 MIS18AQ9NYP9 233 aa16.56■□□□□ 0.24
RAB42P1-201ENST00000555078 TBC1D2BQ9UPU7 963 aa16.56■□□□□ 0.24
RAB42P1-201ENST00000555078 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
RAB42P1-201ENST00000555078 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
RAB42P1-201ENST00000555078 CHRNA5P30532 468 aa16.55■□□□□ 0.24
RAB42P1-201ENST00000555078 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
RAB42P1-201ENST00000555078 BICDL1Q6ZP65 573 aa16.55■□□□□ 0.24
RAB42P1-201ENST00000555078 PIM2Q9P1W9 311 aa16.55■□□□□ 0.24
RAB42P1-201ENST00000555078 BCORQ6W2J9 1755 aa16.55■□□□□ 0.24
RAB42P1-201ENST00000555078 ARFGEF1Q9Y6D6 1849 aa16.54■□□□□ 0.24
RAB42P1-201ENST00000555078 CAMTA2O94983 1202 aa16.54■□□□□ 0.24
RAB42P1-201ENST00000555078 THUMPD2Q9BTF0 503 aaKnown RBP16.54■□□□□ 0.24
RAB42P1-201ENST00000555078 CARMIL3Q8ND23 1372 aa16.53■□□□□ 0.24
RAB42P1-201ENST00000555078 LAMB4A4D0S4 1761 aa16.53■□□□□ 0.24
RAB42P1-201ENST00000555078 DALRD3Q5D0E6 543 aaKnown RBP16.52■□□□□ 0.24
RAB42P1-201ENST00000555078 ARHGAP27Q6ZUM4 889 aa16.52■□□□□ 0.24
RAB42P1-201ENST00000555078 NPM2Q86SE8 214 aaKnown RBP16.52■□□□□ 0.24
RAB42P1-201ENST00000555078 DZIP3Q86Y13 1208 aaKnown RBP16.52■□□□□ 0.24
RAB42P1-201ENST00000555078 PNISRQ8TF01 805 aaKnown RBP16.52■□□□□ 0.24
RAB42P1-201ENST00000555078 DLEC1Q9Y238 1755 aa16.51■□□□□ 0.23
RAB42P1-201ENST00000555078 NBPF26B4DH59 902 aa16.51■□□□□ 0.23
RAB42P1-201ENST00000555078 GIGYF1O75420 1035 aaPredicted RBP16.51■□□□□ 0.23
RAB42P1-201ENST00000555078 NBPF10Q6P3W6 841 aaKnown RBP16.51■□□□□ 0.23
RAB42P1-201ENST00000555078 NBPF15Q8N660 670 aa16.51■□□□□ 0.23
RAB42P1-201ENST00000555078 C1QTNF8P60827 252 aa16.5■□□□□ 0.23
RAB42P1-201ENST00000555078 EIF4A1P60842 406 aaKnown RBP16.5■□□□□ 0.23
RAB42P1-201ENST00000555078 ANKRD31Q8N7Z5 1873 aa16.5■□□□□ 0.23
RAB42P1-201ENST00000555078 RIPK4P57078 832 aa16.49■□□□□ 0.23
RAB42P1-201ENST00000555078 PRR5LQ6MZQ0 368 aa16.49■□□□□ 0.23
RAB42P1-201ENST00000555078 ZNF526Q8TF50 670 aaPredicted RBP16.49■□□□□ 0.23
RAB42P1-201ENST00000555078 PRKRIP1Q9H875 184 aaPredicted RBP16.49■□□□□ 0.23
RAB42P1-201ENST00000555078 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
RAB42P1-201ENST00000555078 SETDB2Q96T68 719 aa16.48■□□□□ 0.23
RAB42P1-201ENST00000555078 GPBP1L1Q9HC44 474 aaPredicted RBP16.48■□□□□ 0.23
RAB42P1-201ENST00000555078 C2CD5Q86YS7 1000 aa16.47■□□□□ 0.23
RAB42P1-201ENST00000555078 CCDC146Q8IYE0 955 aa16.47■□□□□ 0.23
RAB42P1-201ENST00000555078 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
RAB42P1-201ENST00000555078 COL11A2P13942 1736 aaPredicted RBP16.46■□□□□ 0.23
RAB42P1-201ENST00000555078 CLEC4GQ6UXB4 293 aa16.46■□□□□ 0.23
RAB42P1-201ENST00000555078 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.23
RAB42P1-201ENST00000555078 H0YIN7 160 aa16.45■□□□□ 0.22
RAB42P1-201ENST00000555078 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
RAB42P1-201ENST00000555078 BRIP1Q9BX63 1249 aa16.45■□□□□ 0.22
RAB42P1-201ENST00000555078 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
RAB42P1-201ENST00000555078 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
RAB42P1-201ENST00000555078 RGL2O15211 777 aa16.44■□□□□ 0.22
RAB42P1-201ENST00000555078 PDE6BP35913 854 aa16.44■□□□□ 0.22
RAB42P1-201ENST00000555078 LMOD3Q0VAK6 560 aa16.44■□□□□ 0.22
RAB42P1-201ENST00000555078 C9orf131Q5VYM1 1079 aa16.44■□□□□ 0.22
RAB42P1-201ENST00000555078 TTLL6Q8N841 843 aa16.44■□□□□ 0.22
RAB42P1-201ENST00000555078 CNBD1Q8NA66 436 aa16.44■□□□□ 0.22
RAB42P1-201ENST00000555078 RUNDC1Q96C34 613 aa16.44■□□□□ 0.22
RAB42P1-201ENST00000555078 ADAMTS8Q9UP79 889 aa16.44■□□□□ 0.22
RAB42P1-201ENST00000555078 NEUROD2Q15784 382 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms