RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 SYNPO2Q9UMS6 1093 aa9.14□□□□□ -0.95
TGFB3-202ENST00000554980 LARGE2Q8N3Y3 721 aa9.13□□□□□ -0.95
TGFB3-202ENST00000554980 SENP7Q9BQF6 1050 aa9.13□□□□□ -0.95
TGFB3-202ENST00000554980 PUF60Q9UHX1 559 aaKnown RBP9.13□□□□□ -0.95
TGFB3-202ENST00000554980 DLC1Q96QB1 1528 aa9.13□□□□□ -0.95
TGFB3-202ENST00000554980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.12□□□□□ -0.95
TGFB3-202ENST00000554980 ARHGEF28Q8N1W1 1705 aaKnown RBP9.12□□□□□ -0.95
TGFB3-202ENST00000554980 SKIV2LQ15477 1246 aaKnown RBP9.12□□□□□ -0.95
TGFB3-202ENST00000554980 NBPF8Q3BBV2 869 aa9.12□□□□□ -0.95
TGFB3-202ENST00000554980 DPH6Q7L8W6 267 aa9.12□□□□□ -0.95
TGFB3-202ENST00000554980 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
TGFB3-202ENST00000554980 SPOCK2Q92563 424 aa9.12□□□□□ -0.95
TGFB3-202ENST00000554980 AFF2P51816 1311 aa9.12□□□□□ -0.95
TGFB3-202ENST00000554980 CHPF2Q9P2E5 772 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 PHF8Q9UPP1 1060 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 SMC3Q9UQE7 1217 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 NPHP3Q7Z494 1330 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 KRT28Q7Z3Y7 464 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 TTC30BQ8N4P2 665 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 PNISRQ8TF01 805 aaKnown RBP9.11□□□□□ -0.95
TGFB3-202ENST00000554980 CCDC189A1A4V9 331 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 WASLO00401 505 aaPredicted RBP9.11□□□□□ -0.95
TGFB3-202ENST00000554980 LMOD3Q0VAK6 560 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 ICE2Q659A1 982 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 RPAINQ86UA6 219 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 ITFG2Q969R8 447 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 PLSCR2Q9NRY7 297 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 WWC3Q9ULE0 1092 aa9.11□□□□□ -0.95
TGFB3-202ENST00000554980 HDGFL1Q5TGJ6 251 aa9.1□□□□□ -0.95
TGFB3-202ENST00000554980 CARNS1A5YM72 827 aa9.1□□□□□ -0.95
TGFB3-202ENST00000554980 SF3B2Q13435 895 aaKnown RBP9.1□□□□□ -0.95
TGFB3-202ENST00000554980 POM121Q96HA1 1249 aa9.1□□□□□ -0.95
TGFB3-202ENST00000554980 ADGRB2O60241 1585 aa9.09□□□□□ -0.95
TGFB3-202ENST00000554980 SPATA31A3Q5VYP0 1347 aa9.09□□□□□ -0.95
TGFB3-202ENST00000554980 EVA1CP58658 441 aa9.09□□□□□ -0.95
TGFB3-202ENST00000554980 C1QTNF12Q5T7M4 302 aa9.09□□□□□ -0.95
TGFB3-202ENST00000554980 DDRGK1Q96HY6 314 aa9.09□□□□□ -0.95
TGFB3-202ENST00000554980 NGLY1Q96IV0 654 aa9.09□□□□□ -0.95
TGFB3-202ENST00000554980 RBM28Q9NW13 759 aaKnown RBP9.09□□□□□ -0.95
TGFB3-202ENST00000554980 MAP3K20Q9NYL2 800 aaKnown RBP9.09□□□□□ -0.95
TGFB3-202ENST00000554980 SWAP70Q9UH65 585 aa9.09□□□□□ -0.95
TGFB3-202ENST00000554980 MYCBPQ99417 103 aaPredicted RBP9.08□□□□□ -0.96
TGFB3-202ENST00000554980 CDK19Q9BWU1 502 aa9.08□□□□□ -0.96
TGFB3-202ENST00000554980 PLEKHG3A1L390 1219 aa9.08□□□□□ -0.96
TGFB3-202ENST00000554980 MCM6Q14566 821 aa9.08□□□□□ -0.96
TGFB3-202ENST00000554980 C1orf131Q8NDD1 294 aaKnown RBP9.08□□□□□ -0.96
TGFB3-202ENST00000554980 SMAPO00193 183 aa9.07□□□□□ -0.96
TGFB3-202ENST00000554980 POU5F1Q01860 360 aaKnown RBP9.07□□□□□ -0.96
TGFB3-202ENST00000554980 NUDT16Q96DE0 195 aaKnown RBP9.07□□□□□ -0.96
TGFB3-202ENST00000554980 SYNRGQ9UMZ2 1314 aa9.07□□□□□ -0.96
TGFB3-202ENST00000554980 COL22A1Q8NFW1 1626 aaPredicted RBP9.07□□□□□ -0.96
TGFB3-202ENST00000554980 KIAA1210Q9ULL0 1709 aa9.07□□□□□ -0.96
TGFB3-202ENST00000554980 SLC4A2P04920 1241 aa9.07□□□□□ -0.96
TGFB3-202ENST00000554980 ATP7BP35670 1465 aa9.07□□□□□ -0.96
TGFB3-202ENST00000554980 ZC3H6P61129 1189 aaKnown RBP9.07□□□□□ -0.96
TGFB3-202ENST00000554980 EP400NLQ6ZTU2 488 aa9.07□□□□□ -0.96
TGFB3-202ENST00000554980 QTRT2Q9H974 415 aaKnown RBP9.07□□□□□ -0.96
TGFB3-202ENST00000554980 CABP2Q9NPB3 220 aa9.07□□□□□ -0.96
TGFB3-202ENST00000554980 TULP4Q9NRJ4 1543 aa9.06□□□□□ -0.96
TGFB3-202ENST00000554980 ZNF772Q68DY9 489 aaPredicted RBP9.06□□□□□ -0.96
TGFB3-202ENST00000554980 INO80BQ9C086 356 aaPredicted RBP9.06□□□□□ -0.96
TGFB3-202ENST00000554980 ANAPC4Q9UJX5 808 aa9.06□□□□□ -0.96
TGFB3-202ENST00000554980 KIF1AQ12756 1690 aa9.06□□□□□ -0.96
TGFB3-202ENST00000554980 TRPM1Q7Z4N2 1603 aa9.06□□□□□ -0.96
TGFB3-202ENST00000554980 COQ9O75208 318 aa9.06□□□□□ -0.96
TGFB3-202ENST00000554980 CCDC146Q8IYE0 955 aa9.06□□□□□ -0.96
TGFB3-202ENST00000554980 AK7Q96M32 723 aa9.06□□□□□ -0.96
TGFB3-202ENST00000554980 ANKARQ7Z5J8 1434 aa9.06□□□□□ -0.96
TGFB3-202ENST00000554980 hCG_2014768A0A024R1R8 64 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 KIF20AO95235 890 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 SCYL1Q96KG9 808 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 FAM13BQ9NYF5 915 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 BCL9LQ86UU0 1499 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 RXRBP28702 533 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 NAALADL2Q58DX5 795 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 NUTM2GQ5VZR2 741 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 ENOX1Q8TC92 643 aaKnown RBP9.05□□□□□ -0.96
TGFB3-202ENST00000554980 PIK3R5Q8WYR1 880 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 PAIP2Q9BPZ3 127 aaKnown RBP9.05□□□□□ -0.96
TGFB3-202ENST00000554980 ABCF2Q9UG63 623 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 USP21Q9UK80 565 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 TRPM3Q9HCF6 1732 aaPredicted RBP9.05□□□□□ -0.96
TGFB3-202ENST00000554980 TNS3Q68CZ2 1445 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 WASHC2AQ641Q2 1341 aa9.05□□□□□ -0.96
TGFB3-202ENST00000554980 PAK3O75914 559 aaPredicted RBP9.04□□□□□ -0.96
TGFB3-202ENST00000554980 ZC3H12AQ5D1E8 599 aaKnown RBP9.04□□□□□ -0.96
TGFB3-202ENST00000554980 RSPH9Q9H1X1 276 aaPredicted RBP9.04□□□□□ -0.96
TGFB3-202ENST00000554980 ZHX1Q9UKY1 873 aaPredicted RBP9.04□□□□□ -0.96
TGFB3-202ENST00000554980 SEMA3EO15041 775 aa9.04□□□□□ -0.96
TGFB3-202ENST00000554980 NAT1P18440 290 aa9.04□□□□□ -0.96
TGFB3-202ENST00000554980 HSP90AB2PQ58FF8 381 aa9.04□□□□□ -0.96
TGFB3-202ENST00000554980 NGDNQ8NEJ9 315 aaKnown RBP9.04□□□□□ -0.96
TGFB3-202ENST00000554980 ROCK2O75116 1388 aaKnown RBP9.04□□□□□ -0.96
TGFB3-202ENST00000554980 IGBP1P78318 339 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 PTPROQ16827 1216 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 CHMP4CQ96CF2 233 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 FAM210AQ96ND0 272 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 ARPC5LQ9BPX5 153 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 KLF15Q9UIH9 416 aa9.03□□□□□ -0.96
TGFB3-202ENST00000554980 ACEP12821 1306 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms