RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 MRC1P22897 1456 aa32.82■■■□□ 2.84
FOXA1-204ENST00000554607 VSIG10Q8N0Z9 540 aa32.82■■■□□ 2.84
FOXA1-204ENST00000554607 DNAJC5GQ8N7S2 189 aa32.8■■■□□ 2.84
FOXA1-204ENST00000554607 DIAPH1O60610 1272 aaKnown RBP32.79■■■□□ 2.84
FOXA1-204ENST00000554607 NFIXQ14938 502 aa32.79■■■□□ 2.84
FOXA1-204ENST00000554607 MTHFSDQ2M296 383 aaKnown RBP32.79■■■□□ 2.84
FOXA1-204ENST00000554607 COL15A1P39059 1388 aa32.79■■■□□ 2.84
FOXA1-204ENST00000554607 FSTL1Q12841 308 aa32.78■■■□□ 2.84
FOXA1-204ENST00000554607 ZBTB1Q9Y2K1 713 aa32.77■■■□□ 2.84
FOXA1-204ENST00000554607 KIF7Q2M1P5 1343 aa32.77■■■□□ 2.84
FOXA1-204ENST00000554607 KCPQ6ZWJ8 1503 aa32.76■■■□□ 2.83
FOXA1-204ENST00000554607 SERPINB2P05120 415 aa32.74■■■□□ 2.83
FOXA1-204ENST00000554607 ZC3H4Q9UPT8 1303 aaKnown RBP32.74■■■□□ 2.83
FOXA1-204ENST00000554607 RRAGCQ9HB90 399 aa32.73■■■□□ 2.83
FOXA1-204ENST00000554607 VIRMAQ69YN4 1812 aaKnown RBP32.72■■■□□ 2.83
FOXA1-204ENST00000554607 STARD3NLO95772 234 aa32.72■■■□□ 2.83
FOXA1-204ENST00000554607 TTC5Q8N0Z6 440 aa32.72■■■□□ 2.83
FOXA1-204ENST00000554607 SBF1O95248 1867 aa32.71■■■□□ 2.83
FOXA1-204ENST00000554607 PER1O15534 1290 aaPredicted RBP32.71■■■□□ 2.83
FOXA1-204ENST00000554607 BCL2L12Q9HB09 334 aa32.71■■■□□ 2.83
FOXA1-204ENST00000554607 AFDNP55196 1824 aaKnown RBP32.7■■■□□ 2.83
FOXA1-204ENST00000554607 A0A087WZG4 1122 aa32.7■■■□□ 2.83
FOXA1-204ENST00000554607 CANXP27824 592 aaKnown RBP32.7■■■□□ 2.83
FOXA1-204ENST00000554607 CC2D1BQ5T0F9 858 aaKnown RBP32.7■■■□□ 2.83
FOXA1-204ENST00000554607 TTLL6Q8N841 843 aa32.7■■■□□ 2.83
FOXA1-204ENST00000554607 NRXN2Q9P2S2 1712 aa32.68■■■□□ 2.82
FOXA1-204ENST00000554607 LMNB1P20700 586 aa32.68■■■□□ 2.82
FOXA1-204ENST00000554607 H0YIN7 160 aa32.67■■■□□ 2.82
FOXA1-204ENST00000554607 EIF5P55010 431 aaKnown RBP32.67■■■□□ 2.82
FOXA1-204ENST00000554607 C2CD5Q86YS7 1000 aa32.67■■■□□ 2.82
FOXA1-204ENST00000554607 TEX13AQ9BXU3 409 aaPredicted RBP32.67■■■□□ 2.82
FOXA1-204ENST00000554607 WDR90Q96KV7 1748 aa32.67■■■□□ 2.82
FOXA1-204ENST00000554607 TNRC6CQ9HCJ0 1690 aaKnown RBP32.66■■■□□ 2.82
FOXA1-204ENST00000554607 RASSF7Q02833 373 aa32.66■■■□□ 2.82
FOXA1-204ENST00000554607 TEFQ10587 303 aa32.65■■■□□ 2.82
FOXA1-204ENST00000554607 SMC1BQ8NDV3 1235 aa32.65■■■□□ 2.82
FOXA1-204ENST00000554607 GAS2L2Q8NHY3 880 aa32.65■■■□□ 2.82
FOXA1-204ENST00000554607 UBR2Q8IWV8 1755 aa32.64■■■□□ 2.82
FOXA1-204ENST00000554607 KLRG1Q96E93 195 aa32.64■■■□□ 2.82
FOXA1-204ENST00000554607 PDZRN3Q9UPQ7 1066 aa32.64■■■□□ 2.82
FOXA1-204ENST00000554607 GNAT3A8MTJ3 354 aa32.63■■■□□ 2.81
FOXA1-204ENST00000554607 BICDL1Q6ZP65 573 aa32.63■■■□□ 2.81
FOXA1-204ENST00000554607 GLTPD2A6NH11 291 aa32.62■■■□□ 2.81
FOXA1-204ENST00000554607 DLEC1Q9Y238 1755 aa32.62■■■□□ 2.81
FOXA1-204ENST00000554607 U2SURPO15042 1029 aaKnown RBP32.61■■■□□ 2.81
FOXA1-204ENST00000554607 ZNF790Q6PG37 636 aa32.61■■■□□ 2.81
FOXA1-204ENST00000554607 ZNF496Q96IT1 587 aaPredicted RBP32.61■■■□□ 2.81
FOXA1-204ENST00000554607 VEGFAP15692 232 aaPredicted RBP32.6■■■□□ 2.81
FOXA1-204ENST00000554607 IL17REQ8NFR9 667 aa32.6■■■□□ 2.81
FOXA1-204ENST00000554607 NPC1L1Q9UHC9 1359 aa32.59■■■□□ 2.81
FOXA1-204ENST00000554607 HEG1Q9ULI3 1381 aa32.59■■■□□ 2.81
FOXA1-204ENST00000554607 HTRA3P83110 453 aa32.59■■■□□ 2.81
FOXA1-204ENST00000554607 JMYQ8N9B5 988 aa32.59■■■□□ 2.81
FOXA1-204ENST00000554607 PDE6BP35913 854 aa32.58■■■□□ 2.81
FOXA1-204ENST00000554607 NPM2Q86SE8 214 aaKnown RBP32.58■■■□□ 2.81
FOXA1-204ENST00000554607 IL6STP40189 918 aaPredicted RBP32.57■■■□□ 2.8
FOXA1-204ENST00000554607 TBC1D9BQ66K14 1250 aa32.57■■■□□ 2.8
FOXA1-204ENST00000554607 BRIP1Q9BX63 1249 aa32.57■■■□□ 2.8
FOXA1-204ENST00000554607 CARMIL3Q8ND23 1372 aa32.57■■■□□ 2.8
FOXA1-204ENST00000554607 PRELPP51888 382 aa32.56■■■□□ 2.8
FOXA1-204ENST00000554607 FMNL2Q96PY5 1086 aa32.56■■■□□ 2.8
FOXA1-204ENST00000554607 ZNF622Q969S3 477 aaKnown RBP eCLIP32.55■■■□□ 2.8
FOXA1-204ENST00000554607 TBC1D2BQ9UPU7 963 aa32.55■■■□□ 2.8
FOXA1-204ENST00000554607 ZNF330Q9Y3S2 320 aaPredicted RBP32.55■■■□□ 2.8
FOXA1-204ENST00000554607 COL3A1P02461 1466 aaPredicted RBP32.54■■■□□ 2.8
FOXA1-204ENST00000554607 NFKBIEO00221 500 aa32.54■■■□□ 2.8
FOXA1-204ENST00000554607 DPY19L2Q6NUT2 758 aa32.52■■■□□ 2.8
FOXA1-204ENST00000554607 PRR5LQ6MZQ0 368 aa32.51■■■□□ 2.79
FOXA1-204ENST00000554607 CNGB1Q14028 1251 aaPredicted RBP32.5■■■□□ 2.79
FOXA1-204ENST00000554607 SETDB2Q96T68 719 aa32.5■■■□□ 2.79
FOXA1-204ENST00000554607 CCDC88AQ3V6T2 1871 aa32.49■■■□□ 2.79
FOXA1-204ENST00000554607 CEMIPQ8WUJ3 1361 aa32.48■■■□□ 2.79
FOXA1-204ENST00000554607 BTBD11A6QL63 1104 aa32.48■■■□□ 2.79
FOXA1-204ENST00000554607 NPHP1O15259 732 aa32.48■■■□□ 2.79
FOXA1-204ENST00000554607 C21orf2O43822 256 aa32.48■■■□□ 2.79
FOXA1-204ENST00000554607 A1BGP04217 495 aa32.48■■■□□ 2.79
FOXA1-204ENST00000554607 SIPA1L3O60292 1781 aaPredicted RBP32.47■■■□□ 2.79
FOXA1-204ENST00000554607 SCN7AQ01118 1682 aa32.47■■■□□ 2.79
FOXA1-204ENST00000554607 CFAP53Q96M91 514 aa32.47■■■□□ 2.79
FOXA1-204ENST00000554607 ANKRD31Q8N7Z5 1873 aa32.46■■■□□ 2.79
FOXA1-204ENST00000554607 TIAM2Q8IVF5 1701 aa32.46■■■□□ 2.79
FOXA1-204ENST00000554607 CNBD1Q8NA66 436 aa32.46■■■□□ 2.79
FOXA1-204ENST00000554607 CNKSR1Q969H4 720 aa32.46■■■□□ 2.79
FOXA1-204ENST00000554607 CAMTA2O94983 1202 aa32.45■■■□□ 2.79
FOXA1-204ENST00000554607 ST5P78524 1137 aa32.45■■■□□ 2.79
FOXA1-204ENST00000554607 ERFEQ4G0M1 354 aa32.45■■■□□ 2.79
FOXA1-204ENST00000554607 ZNF219Q9P2Y4 722 aaPredicted RBP32.45■■■□□ 2.79
FOXA1-204ENST00000554607 CCDC24Q8N4L8 307 aa32.44■■■□□ 2.78
FOXA1-204ENST00000554607 PRKAR2BP31323 418 aa32.43■■■□□ 2.78
FOXA1-204ENST00000554607 STYK1Q6J9G0 422 aa32.43■■■□□ 2.78
FOXA1-204ENST00000554607 DZIP3Q86Y13 1208 aaKnown RBP32.43■■■□□ 2.78
FOXA1-204ENST00000554607 PHACTR3Q96KR7 559 aa32.43■■■□□ 2.78
FOXA1-204ENST00000554607 NUDCQ9Y266 331 aa32.43■■■□□ 2.78
FOXA1-204ENST00000554607 LTBP3Q9NS15 1303 aa32.43■■■□□ 2.78
FOXA1-204ENST00000554607 SOGA3Q5TF21 947 aa32.42■■■□□ 2.78
FOXA1-204ENST00000554607 TAOK3Q9H2K8 898 aa32.42■■■□□ 2.78
FOXA1-204ENST00000554607 POTECB2RU33 542 aa32.41■■■□□ 2.78
FOXA1-204ENST00000554607 KCNQ3O43525 872 aa32.41■■■□□ 2.78
FOXA1-204ENST00000554607 RSPH6AQ9H0K4 717 aa32.41■■■□□ 2.78
FOXA1-204ENST00000554607 MASTLQ96GX5 879 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms