RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 HMMRO75330 724 aa18.09■□□□□ 0.49
PPP4R3A-201ENST00000554308 SRCIN1Q9C0H9 1055 aa18.09■□□□□ 0.49
PPP4R3A-201ENST00000554308 DDX54Q8TDD1 881 aaKnown RBP18.09■□□□□ 0.49
PPP4R3A-201ENST00000554308 DNAAF4Q8WXU2 420 aa18.09■□□□□ 0.49
PPP4R3A-201ENST00000554308 PNMA6EA0A0J9YXQ4 647 aa18.08■□□□□ 0.49
PPP4R3A-201ENST00000554308 UBTFL1P0CB47 393 aaPredicted RBP18.08■□□□□ 0.49
PPP4R3A-201ENST00000554308 CABP4P57796 275 aa18.08■□□□□ 0.49
PPP4R3A-201ENST00000554308 EXOC6BQ9Y2D4 811 aa18.08■□□□□ 0.49
PPP4R3A-201ENST00000554308 FAM208AQ9UK61 1670 aaKnown RBP18.08■□□□□ 0.48
PPP4R3A-201ENST00000554308 TTC5Q8N0Z6 440 aa18.08■□□□□ 0.48
PPP4R3A-201ENST00000554308 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.48
PPP4R3A-201ENST00000554308 OTUD7AQ8TE49 926 aaPredicted RBP18.08■□□□□ 0.48
PPP4R3A-201ENST00000554308 ZNF496Q96IT1 587 aaPredicted RBP18.08■□□□□ 0.48
PPP4R3A-201ENST00000554308 MYL6BP14649 208 aa18.07■□□□□ 0.48
PPP4R3A-201ENST00000554308 OVOS2A0A0G2JMS6 1433 aa18.07■□□□□ 0.48
PPP4R3A-201ENST00000554308 NBPF7P0C2Y1 421 aaPredicted RBP18.07■□□□□ 0.48
PPP4R3A-201ENST00000554308 DDIT3P35638 169 aa18.07■□□□□ 0.48
PPP4R3A-201ENST00000554308 NAP1L5Q96NT1 182 aaPredicted RBP18.07■□□□□ 0.48
PPP4R3A-201ENST00000554308 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
PPP4R3A-201ENST00000554308 KDM3BQ7LBC6 1761 aa18.06■□□□□ 0.48
PPP4R3A-201ENST00000554308 PIP4K2AP48426 406 aaPredicted RBP18.06■□□□□ 0.48
PPP4R3A-201ENST00000554308 BMP2KLQ5H9B9 411 aa18.06■□□□□ 0.48
PPP4R3A-201ENST00000554308 MAP3K2Q9Y2U5 619 aa18.06■□□□□ 0.48
PPP4R3A-201ENST00000554308 PLEKHM2Q8IWE5 1019 aa18.06■□□□□ 0.48
PPP4R3A-201ENST00000554308 TNPO1Q92973 898 aaKnown RBP18.06■□□□□ 0.48
PPP4R3A-201ENST00000554308 HEG1Q9ULI3 1381 aa18.05■□□□□ 0.48
PPP4R3A-201ENST00000554308 CRYBG1Q9Y4K1 1723 aa18.05■□□□□ 0.48
PPP4R3A-201ENST00000554308 BEND3Q5T5X7 828 aa18.05■□□□□ 0.48
PPP4R3A-201ENST00000554308 GRPEL1Q9HAV7 217 aa18.05■□□□□ 0.48
PPP4R3A-201ENST00000554308 BTG4Q9NY30 223 aa18.05■□□□□ 0.48
PPP4R3A-201ENST00000554308 CD2BP2O95400 341 aaKnown RBP18.05■□□□□ 0.48
PPP4R3A-201ENST00000554308 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
PPP4R3A-201ENST00000554308 IL2RBP14784 551 aa18.05■□□□□ 0.48
PPP4R3A-201ENST00000554308 COL5A2P05997 1499 aaPredicted RBP18.04■□□□□ 0.48
PPP4R3A-201ENST00000554308 MRE11P49959 708 aa18.04■□□□□ 0.48
PPP4R3A-201ENST00000554308 USP16Q9Y5T5 823 aa18.04■□□□□ 0.48
PPP4R3A-201ENST00000554308 RBM25P49756 843 aaKnown RBP18.04■□□□□ 0.48
PPP4R3A-201ENST00000554308 GAS2L3Q86XJ1 694 aa18.04■□□□□ 0.48
PPP4R3A-201ENST00000554308 CARD10Q9BWT7 1032 aa18.04■□□□□ 0.48
PPP4R3A-201ENST00000554308 ADCY9O60503 1353 aa18.04■□□□□ 0.48
PPP4R3A-201ENST00000554308 CLCN1P35523 988 aa18.03■□□□□ 0.48
PPP4R3A-201ENST00000554308 ATP8B2P98198 1209 aa18.03■□□□□ 0.48
PPP4R3A-201ENST00000554308 HYPKQ9NX55 129 aa18.03■□□□□ 0.48
PPP4R3A-201ENST00000554308 ERBB4Q15303 1308 aa18.03■□□□□ 0.48
PPP4R3A-201ENST00000554308 DDX11L8A8MPP1 907 aa18.03■□□□□ 0.48
PPP4R3A-201ENST00000554308 CWF19L2Q2TBE0 894 aaKnown RBP18.03■□□□□ 0.48
PPP4R3A-201ENST00000554308 DDX21Q9NR30 783 aaKnown RBP eCLIP18.03■□□□□ 0.48
PPP4R3A-201ENST00000554308 PDIA6Q15084 440 aa18.02■□□□□ 0.48
PPP4R3A-201ENST00000554308 KIF2CQ99661 725 aa18.02■□□□□ 0.48
PPP4R3A-201ENST00000554308 PCDH11XQ9BZA7 1347 aa18.02■□□□□ 0.47
PPP4R3A-201ENST00000554308 PCDH11YQ9BZA8 1340 aa18.02■□□□□ 0.47
PPP4R3A-201ENST00000554308 CACNA1FO60840 1977 aa18.02■□□□□ 0.47
PPP4R3A-201ENST00000554308 GSPT1P15170 499 aaKnown RBP18.02■□□□□ 0.47
PPP4R3A-201ENST00000554308 KSR2Q6VAB6 950 aa18.02■□□□□ 0.47
PPP4R3A-201ENST00000554308 RBM42Q9BTD8 480 aaKnown RBP18.01■□□□□ 0.47
PPP4R3A-201ENST00000554308 SNRPA1P09661 255 aaKnown RBP18.01■□□□□ 0.47
PPP4R3A-201ENST00000554308 FMNL2Q96PY5 1086 aa18.01■□□□□ 0.47
PPP4R3A-201ENST00000554308 C9orf78Q9NZ63 289 aaPredicted RBP18.01■□□□□ 0.47
PPP4R3A-201ENST00000554308 PPP1R42Q7Z4L9 355 aa18■□□□□ 0.47
PPP4R3A-201ENST00000554308 ABCC6O95255 1503 aa18■□□□□ 0.47
PPP4R3A-201ENST00000554308 COPS6Q7L5N1 327 aa18■□□□□ 0.47
PPP4R3A-201ENST00000554308 RIC3Q7Z5B4 369 aa18■□□□□ 0.47
PPP4R3A-201ENST00000554308 SNX21Q969T3 373 aa18■□□□□ 0.47
PPP4R3A-201ENST00000554308 SRGAP3O43295 1099 aa17.99■□□□□ 0.47
PPP4R3A-201ENST00000554308 PTCD1O75127 700 aaKnown RBP17.99■□□□□ 0.47
PPP4R3A-201ENST00000554308 TSHZ3Q63HK5 1081 aa17.99■□□□□ 0.47
PPP4R3A-201ENST00000554308 TBC1D9Q6ZT07 1266 aa17.99■□□□□ 0.47
PPP4R3A-201ENST00000554308 DDX58O95786 925 aaKnown RBP17.99■□□□□ 0.47
PPP4R3A-201ENST00000554308 XAGE3Q8WTP9 111 aa17.99■□□□□ 0.47
PPP4R3A-201ENST00000554308 PXDNLA1KZ92 1463 aa17.98■□□□□ 0.47
PPP4R3A-201ENST00000554308 TTC22Q5TAA0 569 aa17.98■□□□□ 0.47
PPP4R3A-201ENST00000554308 LRRCC1Q9C099 1032 aa17.98■□□□□ 0.47
PPP4R3A-201ENST00000554308 SURF6O75683 361 aaKnown RBP17.97■□□□□ 0.47
PPP4R3A-201ENST00000554308 SCN11AQ9UI33 1791 aa17.97■□□□□ 0.47
PPP4R3A-201ENST00000554308 RAB3GAP1Q15042 981 aa17.97■□□□□ 0.47
PPP4R3A-201ENST00000554308 IL1RAPL2Q9NP60 686 aa17.97■□□□□ 0.47
PPP4R3A-201ENST00000554308 SIPA1L3O60292 1781 aaPredicted RBP17.97■□□□□ 0.47
PPP4R3A-201ENST00000554308 ADAMTS7Q9UKP4 1686 aa17.96■□□□□ 0.47
PPP4R3A-201ENST00000554308 ADAMTS2O95450 1211 aa17.96■□□□□ 0.47
PPP4R3A-201ENST00000554308 PIP4K2BP78356 416 aa17.96■□□□□ 0.47
PPP4R3A-201ENST00000554308 ESPNB1AK53 854 aa17.95■□□□□ 0.46
PPP4R3A-201ENST00000554308 SSH3Q8TE77 659 aa17.95■□□□□ 0.46
PPP4R3A-201ENST00000554308 ERVV-2B6SEH9 535 aa17.95■□□□□ 0.46
PPP4R3A-201ENST00000554308 HSP90AA1P07900 732 aaKnown RBP17.95■□□□□ 0.46
PPP4R3A-201ENST00000554308 SDSP20132 328 aa17.95■□□□□ 0.46
PPP4R3A-201ENST00000554308 LINS1Q8NG48 757 aa17.95■□□□□ 0.46
PPP4R3A-201ENST00000554308 NHSL1Q5SYE7 1610 aa17.94■□□□□ 0.46
PPP4R3A-201ENST00000554308 SSFA2P28290 1259 aa17.94■□□□□ 0.46
PPP4R3A-201ENST00000554308 PDE1AP54750 535 aa17.94■□□□□ 0.46
PPP4R3A-201ENST00000554308 ANKRD13DQ6ZTN6 518 aa17.94■□□□□ 0.46
PPP4R3A-201ENST00000554308 CDC45O75419 566 aa17.94■□□□□ 0.46
PPP4R3A-201ENST00000554308 ALDH1L1O75891 902 aa17.94■□□□□ 0.46
PPP4R3A-201ENST00000554308 MYD88Q99836 296 aa17.93■□□□□ 0.46
PPP4R3A-201ENST00000554308 IBTKQ9P2D0 1353 aaPredicted RBP17.93■□□□□ 0.46
PPP4R3A-201ENST00000554308 IGKV5-2P06315 115 aa17.93■□□□□ 0.46
PPP4R3A-201ENST00000554308 NEXNQ0ZGT2 675 aa17.93■□□□□ 0.46
PPP4R3A-201ENST00000554308 JARID2Q92833 1246 aaPredicted RBP17.93■□□□□ 0.46
PPP4R3A-201ENST00000554308 GBP4Q96PP9 640 aa17.93■□□□□ 0.46
PPP4R3A-201ENST00000554308 GRM8O00222 908 aa17.92■□□□□ 0.46
PPP4R3A-201ENST00000554308 NKX1-1Q15270 411 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms