RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SOS1Q07889 1333 aaPredicted RBP10.57□□□□□ -0.72
ABCD4-220ENST00000553998 NFKBIEO00221 500 aa10.56□□□□□ -0.72
ABCD4-220ENST00000553998 ZPR1O75312 459 aa10.56□□□□□ -0.72
ABCD4-220ENST00000553998 NFIXQ14938 502 aa10.56□□□□□ -0.72
ABCD4-220ENST00000553998 BCL2L12Q9HB09 334 aa10.56□□□□□ -0.72
ABCD4-220ENST00000553998 TNRC6CQ9HCJ0 1690 aaKnown RBP10.56□□□□□ -0.72
ABCD4-220ENST00000553998 MYH14Q7Z406 1995 aaKnown RBP10.56□□□□□ -0.72
ABCD4-220ENST00000553998 CYP19A1P11511 503 aaPredicted RBP10.55□□□□□ -0.72
ABCD4-220ENST00000553998 C1orf141Q5JVX7 400 aa10.55□□□□□ -0.72
ABCD4-220ENST00000553998 DNAJC10Q8IXB1 793 aa10.55□□□□□ -0.72
ABCD4-220ENST00000553998 CREBZFQ9NS37 354 aa10.55□□□□□ -0.72
ABCD4-220ENST00000553998 ADAMTS7Q9UKP4 1686 aa10.54□□□□□ -0.72
ABCD4-220ENST00000553998 SERPINB2P05120 415 aa10.54□□□□□ -0.72
ABCD4-220ENST00000553998 DPY19L2Q6NUT2 758 aa10.54□□□□□ -0.72
ABCD4-220ENST00000553998 AEBP1Q8IUX7 1158 aa10.54□□□□□ -0.72
ABCD4-220ENST00000553998 VSIG10Q8N0Z9 540 aa10.54□□□□□ -0.72
ABCD4-220ENST00000553998 PDZRN3Q9UPQ7 1066 aa10.54□□□□□ -0.72
ABCD4-220ENST00000553998 H0YIN7 160 aa10.53□□□□□ -0.72
ABCD4-220ENST00000553998 TNNT2P45379 298 aaPredicted RBP10.53□□□□□ -0.72
ABCD4-220ENST00000553998 AKAP4Q5JQC9 854 aa10.53□□□□□ -0.72
ABCD4-220ENST00000553998 SLC52A2Q9HAB3 445 aa10.53□□□□□ -0.72
ABCD4-220ENST00000553998 PRDM10Q9NQV6 1147 aa10.53□□□□□ -0.72
ABCD4-220ENST00000553998 CHADLQ6NUI6 762 aa10.52□□□□□ -0.73
ABCD4-220ENST00000553998 C2CD5Q86YS7 1000 aa10.52□□□□□ -0.73
ABCD4-220ENST00000553998 SBF1O95248 1867 aa10.52□□□□□ -0.73
ABCD4-220ENST00000553998 LTBP3Q9NS15 1303 aa10.52□□□□□ -0.73
ABCD4-220ENST00000553998 COL15A1P39059 1388 aa10.52□□□□□ -0.73
ABCD4-220ENST00000553998 NRXN2Q9P2S2 1712 aa10.51□□□□□ -0.73
ABCD4-220ENST00000553998 IL13P35225 146 aa10.51□□□□□ -0.73
ABCD4-220ENST00000553998 EIF5P55010 431 aaKnown RBP10.51□□□□□ -0.73
ABCD4-220ENST00000553998 SULT6B1Q6IMI4 303 aa10.51□□□□□ -0.73
ABCD4-220ENST00000553998 BRIP1Q9BX63 1249 aa10.51□□□□□ -0.73
ABCD4-220ENST00000553998 LGR6Q9HBX8 967 aa10.51□□□□□ -0.73
ABCD4-220ENST00000553998 ZBTB1Q9Y2K1 713 aa10.51□□□□□ -0.73
ABCD4-220ENST00000553998 PASKQ96RG2 1323 aa10.51□□□□□ -0.73
ABCD4-220ENST00000553998 TJP1Q07157 1748 aa10.5□□□□□ -0.73
ABCD4-220ENST00000553998 ERFEQ4G0M1 354 aa10.5□□□□□ -0.73
ABCD4-220ENST00000553998 CNTNAP1P78357 1384 aa10.5□□□□□ -0.73
ABCD4-220ENST00000553998 FOXN1O15353 648 aa10.49□□□□□ -0.73
ABCD4-220ENST00000553998 RNMTO43148 476 aaKnown RBP10.49□□□□□ -0.73
ABCD4-220ENST00000553998 SLC34A2O95436 690 aa10.49□□□□□ -0.73
ABCD4-220ENST00000553998 PDE6BP35913 854 aa10.49□□□□□ -0.73
ABCD4-220ENST00000553998 SLC39A6Q13433 755 aa10.49□□□□□ -0.73
ABCD4-220ENST00000553998 KIF7Q2M1P5 1343 aa10.49□□□□□ -0.73
ABCD4-220ENST00000553998 CARMIL3Q8ND23 1372 aa10.49□□□□□ -0.73
ABCD4-220ENST00000553998 A0A087WZG4 1122 aa10.48□□□□□ -0.73
ABCD4-220ENST00000553998 C21orf2O43822 256 aa10.48□□□□□ -0.73
ABCD4-220ENST00000553998 POTEIP0CG38 1075 aa10.48□□□□□ -0.73
ABCD4-220ENST00000553998 POTEJP0CG39 1038 aa10.48□□□□□ -0.73
ABCD4-220ENST00000553998 L3MBTL3Q96JM7 780 aaPredicted RBP10.48□□□□□ -0.73
ABCD4-220ENST00000553998 PANK3Q9H999 370 aa10.48□□□□□ -0.73
ABCD4-220ENST00000553998 MKRN1Q9UHC7 482 aaKnown RBP10.48□□□□□ -0.73
ABCD4-220ENST00000553998 MRC1P22897 1456 aa10.48□□□□□ -0.73
ABCD4-220ENST00000553998 DDNO94850 711 aaPredicted RBP10.47□□□□□ -0.73
ABCD4-220ENST00000553998 ITGBL1O95965 494 aaPredicted RBP10.47□□□□□ -0.73
ABCD4-220ENST00000553998 CTCFP49711 727 aaPredicted RBP10.47□□□□□ -0.73
ABCD4-220ENST00000553998 PRR5LQ6MZQ0 368 aa10.47□□□□□ -0.73
ABCD4-220ENST00000553998 LDHDQ86WU2 507 aa10.47□□□□□ -0.73
ABCD4-220ENST00000553998 WBP1LQ9NX94 342 aa10.47□□□□□ -0.73
ABCD4-220ENST00000553998 IQCA1LA6NCM1 817 aa10.46□□□□□ -0.73
ABCD4-220ENST00000553998 STARD3NLO95772 234 aa10.46□□□□□ -0.73
ABCD4-220ENST00000553998 VEGFBP49765 207 aa10.46□□□□□ -0.73
ABCD4-220ENST00000553998 SOGA3Q5TF21 947 aa10.46□□□□□ -0.73
ABCD4-220ENST00000553998 TBC1D9BQ66K14 1250 aa10.46□□□□□ -0.73
ABCD4-220ENST00000553998 STYK1Q6J9G0 422 aa10.46□□□□□ -0.73
ABCD4-220ENST00000553998 MORC1Q86VD1 984 aa10.46□□□□□ -0.73
ABCD4-220ENST00000553998 C7orf43Q8WVR3 580 aa10.46□□□□□ -0.73
ABCD4-220ENST00000553998 CNKSR1Q969H4 720 aa10.46□□□□□ -0.73
ABCD4-220ENST00000553998 ZNF622Q969S3 477 aaKnown RBP eCLIP10.46□□□□□ -0.73
ABCD4-220ENST00000553998 POLR3GLQ9BT43 218 aa10.46□□□□□ -0.73
ABCD4-220ENST00000553998 TAOK3Q9H2K8 898 aa10.46□□□□□ -0.73
ABCD4-220ENST00000553998 SRGNP10124 158 aa10.45□□□□□ -0.74
ABCD4-220ENST00000553998 CANXP27824 592 aaKnown RBP10.45□□□□□ -0.74
ABCD4-220ENST00000553998 IL6STP40189 918 aaPredicted RBP10.45□□□□□ -0.74
ABCD4-220ENST00000553998 TEX13AQ9BXU3 409 aaPredicted RBP10.45□□□□□ -0.74
ABCD4-220ENST00000553998 TAF1DQ9H5J8 278 aaPredicted RBP10.45□□□□□ -0.74
ABCD4-220ENST00000553998 DLEC1Q9Y238 1755 aa10.44□□□□□ -0.74
ABCD4-220ENST00000553998 KLRG2A4D1S0 409 aaPredicted RBP10.44□□□□□ -0.74
ABCD4-220ENST00000553998 RASSF10A6NK89 507 aa10.44□□□□□ -0.74
ABCD4-220ENST00000553998 TMEM88BA6NKF7 163 aa10.44□□□□□ -0.74
ABCD4-220ENST00000553998 MTHFSDQ2M296 383 aaKnown RBP10.44□□□□□ -0.74
ABCD4-220ENST00000553998 BICDL1Q6ZP65 573 aa10.44□□□□□ -0.74
ABCD4-220ENST00000553998 MASTLQ96GX5 879 aa10.44□□□□□ -0.74
ABCD4-220ENST00000553998 AFDNP55196 1824 aaKnown RBP10.44□□□□□ -0.74
ABCD4-220ENST00000553998 PRPF40BQ6NWY9 871 aaKnown RBP10.43□□□□□ -0.74
ABCD4-220ENST00000553998 AIDAQ96BJ3 306 aa10.43□□□□□ -0.74
ABCD4-220ENST00000553998 VIRMAQ69YN4 1812 aaKnown RBP10.42□□□□□ -0.74
ABCD4-220ENST00000553998 SCN11AQ9UI33 1791 aa10.42□□□□□ -0.74
ABCD4-220ENST00000553998 TIAM2Q8IVF5 1701 aa10.42□□□□□ -0.74
ABCD4-220ENST00000553998 CAMTA2O94983 1202 aa10.42□□□□□ -0.74
ABCD4-220ENST00000553998 RGS19P49795 217 aa10.42□□□□□ -0.74
ABCD4-220ENST00000553998 LBX1P52954 281 aa10.42□□□□□ -0.74
ABCD4-220ENST00000553998 ZNF790Q6PG37 636 aa10.42□□□□□ -0.74
ABCD4-220ENST00000553998 ZNF496Q96IT1 587 aaPredicted RBP10.42□□□□□ -0.74
ABCD4-220ENST00000553998 SETDB2Q96T68 719 aa10.42□□□□□ -0.74
ABCD4-220ENST00000553998 ZNF219Q9P2Y4 722 aaPredicted RBP10.42□□□□□ -0.74
ABCD4-220ENST00000553998 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
ABCD4-220ENST00000553998 HEG1Q9ULI3 1381 aa10.41□□□□□ -0.74
ABCD4-220ENST00000553998 ZNF316A6NFI3 1004 aaPredicted RBP10.41□□□□□ -0.74
ABCD4-220ENST00000553998 RGL2O15211 777 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms