RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 CTCFP49711 727 aaPredicted RBP9.11□□□□□ -0.95
GPHN-206ENST00000553936 FKBP8Q14318 412 aa9.11□□□□□ -0.95
GPHN-206ENST00000553936 AMOTQ4VCS5 1084 aa9.11□□□□□ -0.95
GPHN-206ENST00000553936 PLEKHO1Q53GL0 409 aaPredicted RBP9.11□□□□□ -0.95
GPHN-206ENST00000553936 TTLL6Q8N841 843 aa9.11□□□□□ -0.95
GPHN-206ENST00000553936 SLC4A9Q96Q91 983 aa9.11□□□□□ -0.95
GPHN-206ENST00000553936 PCDH10Q9P2E7 1040 aa9.11□□□□□ -0.95
GPHN-206ENST00000553936 PTCD1O75127 700 aaKnown RBP9.1□□□□□ -0.95
GPHN-206ENST00000553936 DDR1Q08345 913 aa9.1□□□□□ -0.95
GPHN-206ENST00000553936 C1orf141Q5JVX7 400 aa9.1□□□□□ -0.95
GPHN-206ENST00000553936 CHADLQ6NUI6 762 aa9.1□□□□□ -0.95
GPHN-206ENST00000553936 SRP68Q9UHB9 627 aaKnown RBP9.1□□□□□ -0.95
GPHN-206ENST00000553936 MKRN1Q9UHC7 482 aaKnown RBP9.1□□□□□ -0.95
GPHN-206ENST00000553936 PDZRN3Q9UPQ7 1066 aa9.1□□□□□ -0.95
GPHN-206ENST00000553936 COL5A3P25940 1745 aaPredicted RBP9.1□□□□□ -0.95
GPHN-206ENST00000553936 H0YIN7 160 aa9.09□□□□□ -0.95
GPHN-206ENST00000553936 TM4SF1P30408 202 aa9.09□□□□□ -0.95
GPHN-206ENST00000553936 MTHFSP49914 203 aa9.09□□□□□ -0.95
GPHN-206ENST00000553936 SBF1O95248 1867 aa9.08□□□□□ -0.96
GPHN-206ENST00000553936 PCNTO95613 3336 aa9.08□□□□□ -0.96
GPHN-206ENST00000553936 IQCA1LA6NCM1 817 aa9.08□□□□□ -0.96
GPHN-206ENST00000553936 FOXN1O15353 648 aa9.08□□□□□ -0.96
GPHN-206ENST00000553936 ERFEQ4G0M1 354 aa9.08□□□□□ -0.96
GPHN-206ENST00000553936 USPL1Q5W0Q7 1092 aa9.08□□□□□ -0.96
GPHN-206ENST00000553936 ZNF530Q6P9A1 599 aaPredicted RBP9.08□□□□□ -0.96
GPHN-206ENST00000553936 CNTNAP1P78357 1384 aa9.08□□□□□ -0.96
GPHN-206ENST00000553936 EIF4A2Q14240 407 aaKnown RBP9.07□□□□□ -0.96
GPHN-206ENST00000553936 C2CD5Q86YS7 1000 aa9.07□□□□□ -0.96
GPHN-206ENST00000553936 ANKRD26Q9UPS8 1709 aa9.06□□□□□ -0.96
GPHN-206ENST00000553936 SERPINB2P05120 415 aa9.06□□□□□ -0.96
GPHN-206ENST00000553936 SOGA3Q5TF21 947 aa9.06□□□□□ -0.96
GPHN-206ENST00000553936 NFATC2IPQ8NCF5 419 aa9.06□□□□□ -0.96
GPHN-206ENST00000553936 POLKQ9UBT6 870 aa9.06□□□□□ -0.96
GPHN-206ENST00000553936 NARFQ9UHQ1 456 aa9.06□□□□□ -0.96
GPHN-206ENST00000553936 TIAM2Q8IVF5 1701 aa9.05□□□□□ -0.96
GPHN-206ENST00000553936 TMEM88BA6NKF7 163 aa9.05□□□□□ -0.96
GPHN-206ENST00000553936 POTECB2RU33 542 aa9.05□□□□□ -0.96
GPHN-206ENST00000553936 NFKBIEO00221 500 aa9.05□□□□□ -0.96
GPHN-206ENST00000553936 ABCB7O75027 752 aa9.05□□□□□ -0.96
GPHN-206ENST00000553936 PDE6BP35913 854 aa9.05□□□□□ -0.96
GPHN-206ENST00000553936 MAP2K1Q02750 393 aaPredicted RBP9.05□□□□□ -0.96
GPHN-206ENST00000553936 NFIXQ14938 502 aa9.05□□□□□ -0.96
GPHN-206ENST00000553936 FAM161AQ3B820 660 aa9.05□□□□□ -0.96
GPHN-206ENST00000553936 INTS5Q6P9B9 1019 aaKnown RBP9.05□□□□□ -0.96
GPHN-206ENST00000553936 LDHDQ86WU2 507 aa9.05□□□□□ -0.96
GPHN-206ENST00000553936 ZNF622Q969S3 477 aaKnown RBP eCLIP9.05□□□□□ -0.967e-7■■■□□ 14.8
GPHN-206ENST00000553936 CARD14Q9BXL6 1004 aa9.05□□□□□ -0.96
GPHN-206ENST00000553936 TAOK3Q9H2K8 898 aa9.05□□□□□ -0.96
GPHN-206ENST00000553936 SOS1Q07889 1333 aaPredicted RBP9.05□□□□□ -0.96
GPHN-206ENST00000553936 COL15A1P39059 1388 aa9.04□□□□□ -0.96
GPHN-206ENST00000553936 NPHP1O15259 732 aa9.04□□□□□ -0.96
GPHN-206ENST00000553936 LBX1P52954 281 aa9.04□□□□□ -0.96
GPHN-206ENST00000553936 MLLT1Q03111 559 aaPredicted RBP9.04□□□□□ -0.96
GPHN-206ENST00000553936 ABHD8Q96I13 439 aa9.04□□□□□ -0.96
GPHN-206ENST00000553936 BEGAINQ9BUH8 593 aa9.04□□□□□ -0.96
GPHN-206ENST00000553936 MYH14Q7Z406 1995 aaKnown RBP9.04□□□□□ -0.96
GPHN-206ENST00000553936 LTBP3Q9NS15 1303 aa9.04□□□□□ -0.96
GPHN-206ENST00000553936 A0A087WZG4 1122 aa9.03□□□□□ -0.96
GPHN-206ENST00000553936 C21orf2O43822 256 aa9.03□□□□□ -0.96
GPHN-206ENST00000553936 VEGFBP49765 207 aa9.03□□□□□ -0.96
GPHN-206ENST00000553936 NPM2Q86SE8 214 aaKnown RBP9.03□□□□□ -0.96
GPHN-206ENST00000553936 DNAJC10Q8IXB1 793 aa9.03□□□□□ -0.96
GPHN-206ENST00000553936 CNKSR1Q969H4 720 aa9.03□□□□□ -0.96
GPHN-206ENST00000553936 WBP1LQ9NX94 342 aa9.03□□□□□ -0.96
GPHN-206ENST00000553936 PASKQ96RG2 1323 aa9.03□□□□□ -0.96
GPHN-206ENST00000553936 DLEC1Q9Y238 1755 aa9.02□□□□□ -0.97
GPHN-206ENST00000553936 DDNO94850 711 aaPredicted RBP9.02□□□□□ -0.97
GPHN-206ENST00000553936 TNNT2P45379 298 aaPredicted RBP9.02□□□□□ -0.97
GPHN-206ENST00000553936 DEFB115Q30KQ5 88 aa9.02□□□□□ -0.97
GPHN-206ENST00000553936 PNMA8AQ86V59 439 aaPredicted RBP9.02□□□□□ -0.97
GPHN-206ENST00000553936 BRIP1Q9BX63 1249 aa9.02□□□□□ -0.97
GPHN-206ENST00000553936 CYP19A1P11511 503 aaPredicted RBP9.01□□□□□ -0.97
GPHN-206ENST00000553936 AKAP4Q5JQC9 854 aa9.01□□□□□ -0.97
GPHN-206ENST00000553936 BICDL1Q6ZP65 573 aa9.01□□□□□ -0.97
GPHN-206ENST00000553936 VSIG10Q8N0Z9 540 aa9.01□□□□□ -0.97
GPHN-206ENST00000553936 L3MBTL3Q96JM7 780 aaPredicted RBP9.01□□□□□ -0.97
GPHN-206ENST00000553936 SLC52A2Q9HAB3 445 aa9.01□□□□□ -0.97
GPHN-206ENST00000553936 NRXN2Q9P2S2 1712 aa9.01□□□□□ -0.97
GPHN-206ENST00000553936 CLEC11AQ9Y240 323 aa9.01□□□□□ -0.97
GPHN-206ENST00000553936 TJP1Q07157 1748 aa9□□□□□ -0.97
GPHN-206ENST00000553936 RASSF10A6NK89 507 aa9□□□□□ -0.97
GPHN-206ENST00000553936 CCDC85CA6NKD9 419 aa9□□□□□ -0.97
GPHN-206ENST00000553936 STARD3NLO95772 234 aa9□□□□□ -0.97
GPHN-206ENST00000553936 POTEIP0CG38 1075 aa9□□□□□ -0.97
GPHN-206ENST00000553936 POTEJP0CG39 1038 aa9□□□□□ -0.97
GPHN-206ENST00000553936 HSPA8P11142 646 aaKnown RBP9□□□□□ -0.97
GPHN-206ENST00000553936 ECE1P42892 770 aa9□□□□□ -0.97
GPHN-206ENST00000553936 ST5P78524 1137 aa9□□□□□ -0.97
GPHN-206ENST00000553936 EAPPQ56P03 285 aaPredicted RBP9□□□□□ -0.97
GPHN-206ENST00000553936 TAF1DQ9H5J8 278 aaPredicted RBP9□□□□□ -0.97
GPHN-206ENST00000553936 HACL1Q9UJ83 578 aa9□□□□□ -0.97
GPHN-206ENST00000553936 ABT1Q9ULW3 272 aaKnown RBP9□□□□□ -0.97
GPHN-206ENST00000553936 ZBTB1Q9Y2K1 713 aa9□□□□□ -0.97
GPHN-206ENST00000553936 CARMIL3Q8ND23 1372 aa8.99□□□□□ -0.97
GPHN-206ENST00000553936 AFDNP55196 1824 aaKnown RBP8.99□□□□□ -0.97
GPHN-206ENST00000553936 CANXP27824 592 aaKnown RBP8.99□□□□□ -0.97
GPHN-206ENST00000553936 POLA2Q14181 598 aa8.99□□□□□ -0.97
GPHN-206ENST00000553936 SULT6B1Q6IMI4 303 aa8.99□□□□□ -0.97
GPHN-206ENST00000553936 STYK1Q6J9G0 422 aa8.99□□□□□ -0.97
GPHN-206ENST00000553936 TTC5Q8N0Z6 440 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms