RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 TBC1D32Q96NH3 1257 aa18.02■□□□□ 0.48
ARHGEF40-202ENST00000553709 ANKRD36BQ8N2N9 1353 aa18.02■□□□□ 0.48
ARHGEF40-202ENST00000553709 KRT18P05783 430 aaKnown RBP18.02■□□□□ 0.48
ARHGEF40-202ENST00000553709 CWC15Q9P013 229 aaKnown RBP18.02■□□□□ 0.48
ARHGEF40-202ENST00000553709 NPATQ14207 1427 aa18.02■□□□□ 0.47
ARHGEF40-202ENST00000553709 ODF2Q5BJF6 829 aa18.02■□□□□ 0.47
ARHGEF40-202ENST00000553709 IDH1O75874 414 aaKnown RBP18.01■□□□□ 0.47
ARHGEF40-202ENST00000553709 CCDC183Q5T5S1 534 aa18.01■□□□□ 0.47
ARHGEF40-202ENST00000553709 SCAND2PQ9GZW5 306 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF40-202ENST00000553709 FLIIQ13045 1269 aa18.01■□□□□ 0.47
ARHGEF40-202ENST00000553709 WASF1Q92558 559 aa18.01■□□□□ 0.47
ARHGEF40-202ENST00000553709 USHBP1Q8N6Y0 703 aa18.01■□□□□ 0.47
ARHGEF40-202ENST00000553709 CCDC66A2RUB6 948 aa18.01■□□□□ 0.47
ARHGEF40-202ENST00000553709 CAMK4Q16566 473 aa18.01■□□□□ 0.47
ARHGEF40-202ENST00000553709 YEATS2Q9ULM3 1422 aa18.01■□□□□ 0.47
ARHGEF40-202ENST00000553709 SMTNL1A8MU46 457 aa18■□□□□ 0.47
ARHGEF40-202ENST00000553709 CCDC85AQ96PX6 553 aaPredicted RBP18■□□□□ 0.47
ARHGEF40-202ENST00000553709 MBIPQ9NS73 344 aa18■□□□□ 0.47
ARHGEF40-202ENST00000553709 DCAF8L1A6NGE4 600 aa18■□□□□ 0.47
ARHGEF40-202ENST00000553709 AIDAQ96BJ3 306 aa18■□□□□ 0.47
ARHGEF40-202ENST00000553709 LIMCH1Q9UPQ0 1083 aa18■□□□□ 0.47
ARHGEF40-202ENST00000553709 MYD88Q99836 296 aa17.99■□□□□ 0.47
ARHGEF40-202ENST00000553709 AKAP2Q9Y2D5 859 aa17.99■□□□□ 0.47
ARHGEF40-202ENST00000553709 TTC21BQ7Z4L5 1316 aa17.99■□□□□ 0.47
ARHGEF40-202ENST00000553709 RAI14Q9P0K7 980 aa17.99■□□□□ 0.47
ARHGEF40-202ENST00000553709 HSP90AB2PQ58FF8 381 aa17.98■□□□□ 0.47
ARHGEF40-202ENST00000553709 SOGA3Q5TF21 947 aa17.98■□□□□ 0.47
ARHGEF40-202ENST00000553709 LRP2BPQ9P2M1 347 aa17.98■□□□□ 0.47
ARHGEF40-202ENST00000553709 DBF4Q9UBU7 674 aaPredicted RBP17.98■□□□□ 0.47
ARHGEF40-202ENST00000553709 MYO6Q9UM54 1294 aa17.98■□□□□ 0.47
ARHGEF40-202ENST00000553709 HECW2Q9P2P5 1572 aa17.98■□□□□ 0.47
ARHGEF40-202ENST00000553709 SF3B2Q13435 895 aaKnown RBP17.98■□□□□ 0.47
ARHGEF40-202ENST00000553709 HDAC1Q13547 482 aaPredicted RBP17.98■□□□□ 0.47
ARHGEF40-202ENST00000553709 METTL24Q5JXM2 366 aa17.98■□□□□ 0.47
ARHGEF40-202ENST00000553709 FAM177A1Q8N128 213 aaPredicted RBP17.98■□□□□ 0.47
ARHGEF40-202ENST00000553709 STARD3NLO95772 234 aa17.97■□□□□ 0.47
ARHGEF40-202ENST00000553709 CCDC8Q9H0W5 538 aaPredicted RBP17.97■□□□□ 0.47
ARHGEF40-202ENST00000553709 TRPM2O94759 1503 aa17.97■□□□□ 0.47
ARHGEF40-202ENST00000553709 SPINK5Q9NQ38 1064 aaPredicted RBP17.97■□□□□ 0.47
ARHGEF40-202ENST00000553709 SHROOM2Q13796 1616 aa17.97■□□□□ 0.47
ARHGEF40-202ENST00000553709 ZFYVE27Q5T4F4 411 aa17.97■□□□□ 0.47
ARHGEF40-202ENST00000553709 CROCC2H7BZ55 1655 aa17.97■□□□□ 0.47
ARHGEF40-202ENST00000553709 NUTM2BA6NNL0 878 aaPredicted RBP17.97■□□□□ 0.47
ARHGEF40-202ENST00000553709 NUTM2EB1AL46 878 aaPredicted RBP17.97■□□□□ 0.47
ARHGEF40-202ENST00000553709 NUTM2AQ8IVF1 878 aaPredicted RBP17.97■□□□□ 0.47
ARHGEF40-202ENST00000553709 IFIT1P09914 478 aaKnown RBP17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 ATP2B2Q01814 1243 aa17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 LUC7LQ9NQ29 371 aaKnown RBP17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 IGHMBP2P38935 993 aaKnown RBP17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 TTC22Q5TAA0 569 aa17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 SPATA31E1Q6ZUB1 1445 aa17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 YTHDC2Q9H6S0 1430 aaKnown RBP17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 HYPKQ9NX55 129 aa17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 MAGI2Q86UL8 1455 aa17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 ARHGAP45Q92619 1136 aa17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 DEF6Q9H4E7 631 aa17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 PHF8Q9UPP1 1060 aa17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
ARHGEF40-202ENST00000553709 CDC42BPBQ9Y5S2 1711 aa17.95■□□□□ 0.46
ARHGEF40-202ENST00000553709 FAM83GA6ND36 823 aa17.95■□□□□ 0.46
ARHGEF40-202ENST00000553709 PTCD1O75127 700 aaKnown RBP17.95■□□□□ 0.46
ARHGEF40-202ENST00000553709 NUCB1Q02818 461 aa17.95■□□□□ 0.46
ARHGEF40-202ENST00000553709 PER1O15534 1290 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF40-202ENST00000553709 AXDND1Q5T1B0 1012 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF40-202ENST00000553709 ECHDC1Q9NTX5 307 aa17.94■□□□□ 0.46
ARHGEF40-202ENST00000553709 CEP131Q9UPN4 1083 aa17.94■□□□□ 0.46
ARHGEF40-202ENST00000553709 ERLIN1O75477 346 aa17.94■□□□□ 0.46
ARHGEF40-202ENST00000553709 CFAP100Q494V2 611 aa17.94■□□□□ 0.46
ARHGEF40-202ENST00000553709 ANO10Q9NW15 660 aa17.94■□□□□ 0.46
ARHGEF40-202ENST00000553709 LEKR1Q6ZMV7 388 aa17.94■□□□□ 0.46
ARHGEF40-202ENST00000553709 EVI5LQ96CN4 794 aa17.94■□□□□ 0.46
ARHGEF40-202ENST00000553709 PCDHB15Q9Y5E8 787 aa17.94■□□□□ 0.46
ARHGEF40-202ENST00000553709 RRP9O43818 475 aaKnown RBP17.94■□□□□ 0.46
ARHGEF40-202ENST00000553709 TXLNBQ8N3L3 684 aa17.94■□□□□ 0.46
ARHGEF40-202ENST00000553709 TANGO6Q9C0B7 1094 aa17.94■□□□□ 0.46
ARHGEF40-202ENST00000553709 BAG4O95429 457 aaKnown RBP17.93■□□□□ 0.46
ARHGEF40-202ENST00000553709 PTPRTO14522 1441 aa17.93■□□□□ 0.46
ARHGEF40-202ENST00000553709 H0YHG0 523 aa17.92■□□□□ 0.46
ARHGEF40-202ENST00000553709 SYCP1Q15431 976 aa17.92■□□□□ 0.46
ARHGEF40-202ENST00000553709 ZHX3Q9H4I2 956 aa17.92■□□□□ 0.46
ARHGEF40-202ENST00000553709 ACEP12821 1306 aa17.92■□□□□ 0.46
ARHGEF40-202ENST00000553709 IQGAP3Q86VI3 1631 aa17.92■□□□□ 0.46
ARHGEF40-202ENST00000553709 CFAP65Q6ZU64 1925 aaKnown RBP17.92■□□□□ 0.46
ARHGEF40-202ENST00000553709 C8orf76Q96K31 380 aa17.92■□□□□ 0.46
ARHGEF40-202ENST00000553709 ABCF2Q9UG63 623 aa17.92■□□□□ 0.46
ARHGEF40-202ENST00000553709 CCDC181Q5TID7 509 aa17.92■□□□□ 0.46
ARHGEF40-202ENST00000553709 SFPQP23246 707 aaKnown RBP eCLIP17.91■□□□□ 0.46
ARHGEF40-202ENST00000553709 PPIP5K1Q6PFW1 1433 aa17.91■□□□□ 0.46
ARHGEF40-202ENST00000553709 PIK3R4Q99570 1358 aa17.91■□□□□ 0.46
ARHGEF40-202ENST00000553709 KIF2AO00139 706 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF40-202ENST00000553709 TMOD3Q9NYL9 352 aa17.91■□□□□ 0.46
ARHGEF40-202ENST00000553709 RDXP35241 583 aaKnown RBP17.9■□□□□ 0.46
ARHGEF40-202ENST00000553709 PPP1R42Q7Z4L9 355 aa17.9■□□□□ 0.46
ARHGEF40-202ENST00000553709 STX6O43752 255 aa17.9■□□□□ 0.46
ARHGEF40-202ENST00000553709 BMP2KQ9NSY1 1161 aaPredicted RBP17.9■□□□□ 0.46
ARHGEF40-202ENST00000553709 ABCA9Q8IUA7 1624 aa17.9■□□□□ 0.46
ARHGEF40-202ENST00000553709 IFIT5Q13325 482 aaKnown RBP17.9■□□□□ 0.46
ARHGEF40-202ENST00000553709 USP25Q9UHP3 1055 aa17.9■□□□□ 0.46
ARHGEF40-202ENST00000553709 MAP3K2Q9Y2U5 619 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms